{ "type": "genome", "identifier": "GCA_947097145.1", "organism": "Prevotella intermedia", "title": "Prevotella intermedia", "description": "derived from metagenome; incomplete metagenome", "data type": "Genome sequencing and assembly", "organization": "EMG", "publication": [ {} ], "properties": { "assembly_accession": "GCA_947097145.1", "bioproject": "PRJEB53836", "biosample": "SAMEA111493401", "wgs_master": "CAMUQX000000000.1", "refseq_category": "na", "taxid": "28131", "species_taxid": "28131", "organism_name": "Prevotella intermedia", "infraspecific_name": "", "isolate": "SRR8786264_bin.11_metaWRAP_v1.3_MAG", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/10/28", "asm_name": "SRR8786264_bin.11_metaWRAP_v1.3_MAG", "submitter": "EMG", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/947/097/145/GCA_947097145.1_SRR8786264_bin.11_metaWRAP_v1.3_MAG", "excluded_from_refseq": "derived from metagenome; incomplete metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-10-28", "dateModified": "2022-10-28", "datePublished": "2022-10-28", "_annotation": { "sample_count": 1, "sample_organism": [ "Prevotella intermedia" ], "sample_taxid": [ "28131" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "not provided" ], "sample_host_location_id": [], "data_size": "0.668 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 75.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2344677", "Number of Sequences": "163", "Longest Sequences (bp)": "98463", "N50 (bp)": "24431", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "43.5", "Number of CDSs": "1723", "Average Protein Length": "356.9", "Coding Ratio (%)": "78.7", "Number of rRNAs": "0", "Number of tRNAs": "32", "Number of CRISPRs": "1" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Prevotella intermedia", "strain": "strain=ATCC 25611", "accession": "GCA_001953955.1", "taxid": 28131, "species_taxid": 28131, "relation_to_type": "type", "validated": true, "ani": 96.3617, "matched_fragments": 623, "total_fragments": 694, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Prevotella intermedia", "strain": "strain=DSM 20706", "accession": "GCA_000439065.1", "taxid": 28131, "species_taxid": 28131, "relation_to_type": "type", "validated": true, "ani": 96.3558, "matched_fragments": 625, "total_fragments": 694, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Prevotella intermedia", "strain": "strain=NCTC13070", "accession": "GCA_900455005.1", "taxid": 28131, "species_taxid": 28131, "relation_to_type": "type", "validated": true, "ani": 96.3363, "matched_fragments": 627, "total_fragments": 694, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Prevotella intermedia", "strain": "strain=ATCC 25611", "accession": "GCA_000519165.1", "taxid": 28131, "species_taxid": 28131, "relation_to_type": "type", "validated": true, "ani": 96.323, "matched_fragments": 627, "total_fragments": 694, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Prevotella falsenii", "strain": "strain=JCM 15124", "accession": "GCA_000613945.1", "taxid": 515414, "species_taxid": 515414, "relation_to_type": "type", "validated": true, "ani": 90.1892, "matched_fragments": 599, "total_fragments": 694, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prevotella nigrescens", "strain": "strain=FDAARGOS_1486", "accession": "GCA_019930605.1", "taxid": 28133, "species_taxid": 28133, 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