<?xml version="1.0" ?>
<BioSampleSet><BioSample access="public" publication_date="2022-11-02T00:00:00.000" last_update="2022-11-03T22:32:36.000" submission_date="2022-11-03T15:14:36.733" id="31590832" accession="SAMEA111539080">   <Ids>     <Id db="BioSample" is_primary="1">SAMEA111539080</Id>     <Id db="SRA">ERS13649144</Id>   </Ids>   <Description>     <Title>Metagenome-assembled genome: SRR17635517_bin.1_metaWRAP_v1.3_MAG</Title>     <Organism taxonomy_id="216816" taxonomy_name="Bifidobacterium longum">       <OrganismName>Bifidobacterium longum</OrganismName>     </Organism>     <Comment>       <Paragraph>This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR17635517 of study SRP355266.</Paragraph>     </Comment>   </Description>   <Owner>     <Name>EBI</Name>   </Owner>   <Models>     <Model>Generic</Model>   </Models>   <Package display_name="Generic">Generic.1.0</Package>   <Attributes>     <Attribute attribute_name="ENA-CHECKLIST">ERC000047</Attribute>     <Attribute attribute_name="ENA-FIRST-PUBLIC">2022-11-02</Attribute>     <Attribute attribute_name="ENA-LAST-UPDATE">2022-11-02</Attribute>     <Attribute attribute_name="External Id">SAMEA111539080</Attribute>     <Attribute attribute_name="INSDC center alias">EMG</Attribute>     <Attribute attribute_name="INSDC center name">EMG</Attribute>     <Attribute attribute_name="INSDC first public">2022-11-02T04:23:11Z</Attribute>     <Attribute attribute_name="INSDC last update">2022-11-02T04:23:11Z</Attribute>     <Attribute attribute_name="INSDC status">public</Attribute>     <Attribute attribute_name="Submitter Id">SRR17635517_bin.1_metaWRAP_v1.3_MAG</Attribute>     <Attribute attribute_name="assembly quality">Many fragments with little to no review of assembly other than reporting of standard assembly statistics</Attribute>     <Attribute attribute_name="assembly software">metaSPAdes v3.15.3</Attribute>     <Attribute attribute_name="binning parameters">MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.</Attribute>     <Attribute attribute_name="binning software">metaWRAP v1.3</Attribute>     <Attribute attribute_name="broad-scale environmental context" harmonized_name="env_broad_scale" display_name="broad-scale environmental context">Human reproductive system</Attribute>     <Attribute attribute_name="broker name">EMG broker account, EMBL-EBI</Attribute>     <Attribute attribute_name="collection date" harmonized_name="collection_date" display_name="collection date">2008-01-01</Attribute>     <Attribute attribute_name="completeness score">99.54</Attribute>     <Attribute attribute_name="completeness software">CheckM</Attribute>     <Attribute attribute_name="contamination score">0.69</Attribute>     <Attribute attribute_name="environmental medium" harmonized_name="env_medium" display_name="environmental medium">Vagina</Attribute>     <Attribute attribute_name="geographic location (country and/or sea)" harmonized_name="geo_loc_name" display_name="geographic location">USA</Attribute>     <Attribute attribute_name="geographic location (latitude)">39.2904</Attribute>     <Attribute attribute_name="geographic location (longitude)">-76.6122</Attribute>     <Attribute attribute_name="investigation type" harmonized_name="investigation_type" display_name="investigation type">metagenome-assembled genome</Attribute>     <Attribute attribute_name="isolation_source" harmonized_name="isolation_source" display_name="isolation source">vaginal metagenome</Attribute>     <Attribute attribute_name="local environmental context">Vagina</Attribute>     <Attribute attribute_name="metagenomic source">vaginal metagenome</Attribute>     <Attribute attribute_name="project name" harmonized_name="project_name" display_name="project name">The overarching goal of the VMRC is to identify correlates of stability and resilience in the vaginal microbiota and leverage these features to devise a framework for an intervention to maintain/restore vaginal health.</Attribute>     <Attribute attribute_name="sample derived from">SAMN25037394</Attribute>     <Attribute attribute_name="sample name" harmonized_name="sample_name" display_name="sample name">SRR17635517_bin.1_metaWRAP_v1.3_MAG</Attribute>     <Attribute attribute_name="sequencing method">Illumina HiSeq 4000</Attribute>     <Attribute attribute_name="taxonomic classification">The taxonomy of this metagenome-assembled genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Bifidobacteriales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium longum</Attribute>     <Attribute attribute_name="taxonomic identity marker">multi-marker approach</Attribute>   </Attributes>   <Status status="live" when="2022-11-04T08:58:03.567"/> </BioSample> </BioSampleSet>
