[2023-06-14 01:07:23,399] [INFO] DFAST_QC pipeline started.
[2023-06-14 01:07:23,400] [INFO] DFAST_QC version: 0.5.7
[2023-06-14 01:07:23,401] [INFO] DQC Reference Directory: /var/lib/cwl/stgb9999f2e-b313-4ac3-84aa-c1ea031efb8f/dqc_reference
[2023-06-14 01:07:24,707] [INFO] ===== Start taxonomy check using ANI =====
[2023-06-14 01:07:24,708] [INFO] Task started: Prodigal
[2023-06-14 01:07:24,708] [INFO] Running command: gunzip -c /var/lib/cwl/stg55083201-6f3e-4c4a-8a36-1a73e62abb25/GCA_947259565.1_ERZ12284415_genomic.fna.gz | prodigal -d GCA_947259565.1_ERZ12284415_genomic.fna/cds.fna -a GCA_947259565.1_ERZ12284415_genomic.fna/protein.faa -g 11 -q > /dev/null
[2023-06-14 01:07:34,302] [INFO] Task succeeded: Prodigal
[2023-06-14 01:07:34,303] [INFO] Task started: HMMsearch
[2023-06-14 01:07:34,303] [INFO] Running command: hmmsearch --tblout GCA_947259565.1_ERZ12284415_genomic.fna/hmmer_result.tsv -E 1E-50 /var/lib/cwl/stgb9999f2e-b313-4ac3-84aa-c1ea031efb8f/dqc_reference/reference_markers.hmm GCA_947259565.1_ERZ12284415_genomic.fna/protein.faa > /dev/null
[2023-06-14 01:07:34,549] [INFO] Task succeeded: HMMsearch
[2023-06-14 01:07:34,550] [INFO] Found 6/6 markers.
[2023-06-14 01:07:34,584] [INFO] Query marker FASTA was written to GCA_947259565.1_ERZ12284415_genomic.fna/markers.fasta
[2023-06-14 01:07:34,584] [INFO] Task started: Blastn
[2023-06-14 01:07:34,584] [INFO] Running command: blastn -query GCA_947259565.1_ERZ12284415_genomic.fna/markers.fasta -db /var/lib/cwl/stgb9999f2e-b313-4ac3-84aa-c1ea031efb8f/dqc_reference/reference_markers.fasta -out GCA_947259565.1_ERZ12284415_genomic.fna/blast.markers.tsv -outfmt 6 -max_hsps 1 -num_alignments 5
[2023-06-14 01:07:35,316] [INFO] Task succeeded: Blastn
[2023-06-14 01:07:35,321] [INFO] Selected 40 target genomes.
[2023-06-14 01:07:35,322] [INFO] Target genome list was writen to GCA_947259565.1_ERZ12284415_genomic.fna/target_genomes.txt
[2023-06-14 01:07:35,361] [INFO] Task started: fastANI
[2023-06-14 01:07:35,362] [INFO] Running command: fastANI --query /var/lib/cwl/stg55083201-6f3e-4c4a-8a36-1a73e62abb25/GCA_947259565.1_ERZ12284415_genomic.fna.gz --refList GCA_947259565.1_ERZ12284415_genomic.fna/target_genomes.txt --output GCA_947259565.1_ERZ12284415_genomic.fna/fastani_result.tsv --threads 1
[2023-06-14 01:07:57,855] [INFO] Task succeeded: fastANI
[2023-06-14 01:07:57,855] [INFO] Loading species specific ANI threshold from /var/lib/cwl/stgb9999f2e-b313-4ac3-84aa-c1ea031efb8f/dqc_reference/prokaryote_ANI_species_specific_threshold.txt
[2023-06-14 01:07:57,856] [WARNING] Species-specific ANI threshold file not found. Will use the default threshold for all species. [/var/lib/cwl/stgb9999f2e-b313-4ac3-84aa-c1ea031efb8f/dqc_reference/prokaryote_ANI_species_specific_threshold.txt]
[2023-06-14 01:07:57,891] [INFO] Found 40 fastANI hits (0 hits with ANI > threshold)
[2023-06-14 01:07:57,891] [INFO] The taxonomy check result is classified as 'below_threshold'.
[2023-06-14 01:07:57,891] [INFO] DFAST Taxonomy check final result
--------------------------------------------------------------------------------
organism_name	strain	accession	taxid	species_taxid	relation_to_type	validated	ani	matched_fragments	total_fragments	ani_threshold	status
Parasphingopyxis lamellibrachiae	strain=DSM 26725	GCA_003385775.1	680125	680125	type	True	81.9669	236	1042	95	below_threshold
Parasphingopyxis algicola	strain=JCM 31719	GCA_013378075.1	2026624	2026624	type	True	79.1927	241	1042	95	below_threshold
Parasphingopyxis marina	strain=GrpM-11	GCA_014237875.1	2761622	2761622	type	True	78.3194	215	1042	95	below_threshold
Croceibacterium ferulae	strain=SX2RGS8	GCA_003660445.1	1854641	1854641	type	True	77.9126	173	1042	95	below_threshold
Croceibacterium atlanticum	strain=26DY36	GCA_001008165.2	1267766	1267766	type	True	77.9115	237	1042	95	below_threshold
Croceibacterium atlanticum	strain=DSM 100738	GCA_014199315.1	1267766	1267766	type	True	77.884	240	1042	95	below_threshold
Pelagerythrobacter marinus	strain=H32	GCA_009827515.1	538382	538382	type	True	77.8493	255	1042	95	below_threshold
Caenibius tardaugens	strain=NBRC 16725	GCA_003860345.1	169176	169176	type	True	77.8033	212	1042	95	below_threshold
Pelagerythrobacter marensis	strain=KCTC 22370	GCA_001028625.1	543877	543877	type	True	77.777	226	1042	95	below_threshold
Caenibius tardaugens	strain=NBRC 16725	GCA_000466945.1	169176	169176	type	True	77.7159	212	1042	95	below_threshold
Pelagerythrobacter marensis	strain=DSM 21428	GCA_001461885.1	543877	543877	type	True	77.6589	231	1042	95	below_threshold
Novosphingobium marinum	strain=CGMCC 1.12918	GCA_014640055.1	1514948	1514948	type	True	77.576	196	1042	95	below_threshold
Novosphingobium marinum	strain=DSM 29043	GCA_013408095.1	1514948	1514948	type	True	77.5751	199	1042	95	below_threshold
Pelagerythrobacter rhizovicinus	strain=AY-3R	GCA_004135625.1	2268576	2268576	type	True	77.5021	224	1042	95	below_threshold
Tsuneonella deserti	strain=CGMCC 1.15959	GCA_014644315.1	2035528	2035528	type	True	77.4836	155	1042	95	below_threshold
Pelagerythrobacter aerophilus	strain=Ery1	GCA_003581645.1	2306995	2306995	type	True	77.4747	225	1042	95	below_threshold
Croceicoccus gelatinilyticus	strain=1NDH52	GCA_018398395.1	2835536	2835536	type	True	77.4717	200	1042	95	below_threshold
Novosphingobium huizhouense	strain=c7	GCA_020179475.1	2866625	2866625	type	True	77.4674	214	1042	95	below_threshold
Qipengyuania nanhaisediminis	strain=CGMCC 1.7715	GCA_900115585.1	604088	604088	type	True	77.4617	195	1042	95	below_threshold
Qipengyuania proteolytica	strain=6B39	GCA_019711565.1	2867239	2867239	type	True	77.4515	218	1042	95	below_threshold
Novosphingobium lentum	strain=NBRC 107847	GCA_001590965.1	145287	145287	type	True	77.4376	244	1042	95	below_threshold
Aurantiacibacter luteus	strain=KA37	GCA_001010945.1	1581420	1581420	type	True	77.4311	182	1042	95	below_threshold
Novosphingobium olei	strain=TW-4	GCA_012927405.1	2728851	2728851	type	True	77.4112	204	1042	95	below_threshold
Alteripontixanthobacter maritimus	strain=HME9302	GCA_003340475.1	2161824	2161824	type	True	77.3328	142	1042	95	below_threshold
Sphingomonas changnyeongensis	strain=C33	GCA_009913435.1	2698679	2698679	type	True	77.2847	162	1042	95	below_threshold
Qipengyuania xiamenensis	strain=1XM1-15A	GCA_019711495.1	2867237	2867237	type	True	77.2061	194	1042	95	below_threshold
Croceibacterium xixiisoli	strain=S36	GCA_009827305.1	1476466	1476466	type	True	77.1813	203	1042	95	below_threshold
Erythrobacter cryptus	strain=DSM 12079	GCA_000422985.1	196588	196588	type	True	77.176	198	1042	95	below_threshold
Erythrobacter donghaensis	strain=DSM 16220	GCA_002155425.1	267135	267135	suspected-type	True	77.1752	204	1042	95	below_threshold
Erythrobacter ramosus	strain=JCM 10282	GCA_009828055.1	35811	35811	type	True	77.1625	176	1042	95	below_threshold
Novosphingobium ginsenosidimutans	strain=FW-6	GCA_007954425.1	1176536	1176536	type	True	77.1522	185	1042	95	below_threshold
Aurantiacibacter rhizosphaerae	strain=GH3-10	GCA_009807005.1	2691582	2691582	type	True	77.1093	162	1042	95	below_threshold
Sphingomonas fennica	strain=K101	GCA_003034225.1	114404	114404	type	True	77.0911	171	1042	95	below_threshold
Erythrobacter rubeus	strain=KMU-140	GCA_014705715.1	2760803	2760803	type	True	76.993	157	1042	95	below_threshold
Sphingomonas suaedae	strain=XS-10	GCA_007833215.1	2599297	2599297	type	True	76.9776	159	1042	95	below_threshold
Sphingomonas oleivorans	strain=FW-11	GCA_003050615.1	1735121	1735121	type	True	76.88	143	1042	95	below_threshold
Altererythrobacter lutimaris	strain=JGD-16	GCA_013371495.1	2743979	2743979	type	True	76.8462	102	1042	95	below_threshold
Sphingomonas alpina	strain=DSM 22537	GCA_025370095.1	653931	653931	type	True	76.7424	175	1042	95	below_threshold
Sphingomonas morindae	strain=NBD5	GCA_023822065.1	1541170	1541170	type	True	76.651	146	1042	95	below_threshold
Sphingomonas profundi	strain=LMO-1	GCA_009739515.1	2681549	2681549	type	True	76.5981	151	1042	95	below_threshold
--------------------------------------------------------------------------------
[2023-06-14 01:07:57,894] [INFO] DFAST Taxonomy check result was written to GCA_947259565.1_ERZ12284415_genomic.fna/tc_result.tsv
[2023-06-14 01:07:57,894] [INFO] ===== Taxonomy check completed =====
[2023-06-14 01:07:57,895] [INFO] ===== Start completeness check using CheckM =====
[2023-06-14 01:07:57,895] [INFO] Setting CHECKM_DATA_PATH to /var/lib/cwl/stgb9999f2e-b313-4ac3-84aa-c1ea031efb8f/dqc_reference/checkm_data
[2023-06-14 01:07:57,896] [INFO] Selected 'Prokaryote' markers (life, taxid=0) for CheckM
[2023-06-14 01:07:57,932] [INFO] Task started: CheckM
[2023-06-14 01:07:57,933] [INFO] Running command: checkm taxonomy_wf --tab_table -f GCA_947259565.1_ERZ12284415_genomic.fna/cc_result.tsv -t 1 life "Prokaryote" GCA_947259565.1_ERZ12284415_genomic.fna/checkm_input GCA_947259565.1_ERZ12284415_genomic.fna/checkm_result
[2023-06-14 01:08:29,933] [INFO] Task succeeded: CheckM
[2023-06-14 01:08:29,940] [INFO] Completeness check finished.
--------------------------------------------------------------------------------
Completeness: 100.00%
Contamintation: 12.50%
Strain heterogeneity: 0.00%
--------------------------------------------------------------------------------
[2023-06-14 01:08:29,964] [INFO] ===== Completeness check finished =====
[2023-06-14 01:08:29,964] [INFO] ===== Start GTDB Search =====
[2023-06-14 01:08:29,965] [INFO] Query marker FASTA already exists. Will reuse it. (GCA_947259565.1_ERZ12284415_genomic.fna/markers.fasta)
[2023-06-14 01:08:29,965] [INFO] Task started: Blastn
[2023-06-14 01:08:29,965] [INFO] Running command: blastn -query GCA_947259565.1_ERZ12284415_genomic.fna/markers.fasta -db /var/lib/cwl/stgb9999f2e-b313-4ac3-84aa-c1ea031efb8f/dqc_reference/reference_markers_gtdb.fasta -out GCA_947259565.1_ERZ12284415_genomic.fna/blast.markers.gtdb.tsv -outfmt 6 -max_hsps 1 -num_alignments 5
[2023-06-14 01:08:31,087] [INFO] Task succeeded: Blastn
[2023-06-14 01:08:31,092] [INFO] Selected 37 target genomes.
[2023-06-14 01:08:31,093] [INFO] Target genome list was writen to GCA_947259565.1_ERZ12284415_genomic.fna/target_genomes_gtdb.txt
[2023-06-14 01:08:31,175] [INFO] Task started: fastANI
[2023-06-14 01:08:31,176] [INFO] Running command: fastANI --query /var/lib/cwl/stg55083201-6f3e-4c4a-8a36-1a73e62abb25/GCA_947259565.1_ERZ12284415_genomic.fna.gz --refList GCA_947259565.1_ERZ12284415_genomic.fna/target_genomes_gtdb.txt --output GCA_947259565.1_ERZ12284415_genomic.fna/fastani_result_gtdb.tsv --threads 1
[2023-06-14 01:08:51,091] [INFO] Task succeeded: fastANI
[2023-06-14 01:08:51,123] [INFO] Found 37 fastANI hits (0 hits with ANI > circumscription radius)
[2023-06-14 01:08:51,124] [INFO] GTDB search result
--------------------------------------------------------------------------------
accession	gtdb_species	ani	matched_fragments	total_fragments	gtdb_taxonomy	ani_circumscription_radius	mean_intra_species_ani	min_intra_species_ani	mean_intra_species_af	min_intra_species_af	num_clustered_genomes	status
GCF_003385775.1	s__Parasphingopyxis lamellibrachiae	82.0314	234	1042	d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Parasphingopyxis	95.0	N/A	N/A	N/A	N/A	1	-
GCA_905479515.1	s__Parasphingopyxis sp905479515	81.7848	169	1042	d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Parasphingopyxis	95.0	N/A	N/A	N/A	N/A	1	-
GCF_013378075.1	s__Parasphingopyxis algicola	79.1929	241	1042	d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Parasphingopyxis	95.0	N/A	N/A	N/A	N/A	1	-
GCF_014237875.1	s__Parasphingopyxis sp014237875	78.3014	216	1042	d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Parasphingopyxis	95.0	N/A	N/A	N/A	N/A	1	-
GCF_003569745.1	s__Croceibacterium sp003569745	78.2307	245	1042	d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Croceibacterium	95.0	N/A	N/A	N/A	N/A	1	-
GCF_013378055.1	s__Parasphingopyxis sp013378055	78.0406	173	1042	d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Parasphingopyxis	95.0	N/A	N/A	N/A	N/A	1	-
GCF_003660445.1	s__Croceibacterium ferulae	77.9126	173	1042	d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Croceibacterium	95.0	N/A	N/A	N/A	N/A	1	-
GCF_001008165.2	s__Croceibacterium atlanticum	77.9115	237	1042	d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Croceibacterium	95.0	100.00	100.00	1.00	1.00	2	-
GCF_009827535.1	s__Altererythrobacter_F oceanensis	77.8742	206	1042	d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Altererythrobacter_F	95.0	N/A	N/A	N/A	N/A	1	-
GCF_009827515.1	s__Pelagerythrobacter marinus	77.8493	255	1042	d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Pelagerythrobacter	95.0	N/A	N/A	N/A	N/A	1	-
GCA_017308255.1	s__Croceibacterium sp001897135	77.817	233	1042	d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Croceibacterium	95.0	99.96	99.96	0.98	0.98	2	-
GCF_003860345.1	s__Caenibius tardaugens	77.8033	212	1042	d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Caenibius	95.0	100.00	100.00	1.00	1.00	2	-
GCA_013001755.1	s__Parasphingopyxis sp013001755	77.7283	147	1042	d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Parasphingopyxis	95.0	N/A	N/A	N/A	N/A	1	-
GCA_014763545.1	s__JACXVD01 sp014763545	77.7252	253	1042	d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__JACXVD01	95.0	99.92	99.92	0.96	0.96	2	-
GCF_001427865.1	s__Croceibacterium sp001427865	77.7011	185	1042	d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Croceibacterium	95.0	N/A	N/A	N/A	N/A	1	-
GCA_017744735.1	s__Caenibius sp017744735	77.6968	250	1042	d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Caenibius	95.0	99.56	99.56	0.78	0.78	2	-
GCF_009828065.1	s__Croceibacterium soli	77.6885	206	1042	d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Croceibacterium	95.0	N/A	N/A	N/A	N/A	1	-
GCF_001625325.1	s__Caenibius estronivorus	77.6486	197	1042	d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Caenibius	95.0	N/A	N/A	N/A	N/A	1	-
GCF_001698205.1	s__Tsuneonella dongtanensis	77.6448	179	1042	d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Tsuneonella	95.0	N/A	N/A	N/A	N/A	1	-
GCF_001014975.1	s__Novosphingobium sp002336885	77.6057	222	1042	d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Novosphingobium	95.0	97.66	97.51	0.82	0.80	4	-
GCF_002556635.1	s__Novosphingobium sp002556635	77.5818	241	1042	d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Novosphingobium	95.0	N/A	N/A	N/A	N/A	1	-
GCA_011765465.1	s__Erythrobacter sp011765465	77.578	210	1042	d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Erythrobacter	95.0	N/A	N/A	N/A	N/A	1	-
GCF_005145025.1	s__Novosphingobium sp005145025	77.53	216	1042	d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Novosphingobium	95.0	N/A	N/A	N/A	N/A	1	-
GCF_004135625.1	s__Pelagerythrobacter rhizovicinus	77.5021	224	1042	d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Pelagerythrobacter	95.0	N/A	N/A	N/A	N/A	1	-
GCA_003248395.1	s__Qipengyuania sp003248395	77.4872	177	1042	d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Qipengyuania	95.0	N/A	N/A	N/A	N/A	1	-
GCA_001898545.1	s__Caenibius sp001898545	77.4668	221	1042	d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Caenibius	95.0	N/A	N/A	N/A	N/A	1	-
GCF_003581645.1	s__Pelagerythrobacter aerophilus	77.4555	225	1042	d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Pelagerythrobacter	95.0	N/A	N/A	N/A	N/A	1	-
GCF_001590965.1	s__Novosphingobium lentum	77.4505	243	1042	d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Novosphingobium	95.0	N/A	N/A	N/A	N/A	1	-
GCF_013336795.1	s__Pseudopontixanthobacter muriae	77.3924	161	1042	d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Pseudopontixanthobacter	95.0	N/A	N/A	N/A	N/A	1	-
GCF_001281485.1	s__Erythrobacter epoxidivorans	77.3634	190	1042	d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Erythrobacter	95.0	N/A	N/A	N/A	N/A	1	-
GCF_009828115.1	s__Pseudopontixanthobacter_A sediminis	77.3631	196	1042	d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Pseudopontixanthobacter_A	95.0	N/A	N/A	N/A	N/A	1	-
GCA_002337385.1	s__Alteraurantiacibacter sp002337385	77.297	162	1042	d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Alteraurantiacibacter	95.0	N/A	N/A	N/A	N/A	1	-
GCF_014652555.1	s__Novosphingobium colocasiae	77.2914	221	1042	d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Novosphingobium	95.0	N/A	N/A	N/A	N/A	1	-
GCF_002855555.1	s__Novosphingobium sp002855555	77.2035	217	1042	d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Novosphingobium	95.0	N/A	N/A	N/A	N/A	1	-
GCF_009807005.1	s__Alteraurantiacibacter rhizosphaerae	77.1093	162	1042	d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Alteraurantiacibacter	95.0	N/A	N/A	N/A	N/A	1	-
GCA_018819685.1	s__Qipengyuania sp018819685	76.9157	131	1042	d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Qipengyuania	95.0	99.48	99.48	0.85	0.85	2	-
GCA_017987575.1	s__Novosphingobium sp017987575	76.7249	142	1042	d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Novosphingobium	95.0	99.30	99.30	0.83	0.83	2	-
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[2023-06-14 01:08:51,126] [INFO] GTDB search result was written to GCA_947259565.1_ERZ12284415_genomic.fna/result_gtdb.tsv
[2023-06-14 01:08:51,126] [INFO] ===== GTDB Search completed =====
[2023-06-14 01:08:51,133] [INFO] DFAST_QC result json was written to GCA_947259565.1_ERZ12284415_genomic.fna/dqc_result.json
[2023-06-14 01:08:51,134] [INFO] DFAST_QC completed!
[2023-06-14 01:08:51,134] [INFO] Total running time: 0h1m28s