{
    "type": "genome",
    "identifier": "GCA_947365455.1",
    "organism": "uncultured Porphyromonadaceae bacterium",
    "title": "uncultured Porphyromonadaceae bacterium",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "EMG",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_947365455.1",
        "bioproject": "PRJEB56769",
        "biosample": "SAMEA112144165",
        "wgs_master": "CANAWZ000000000.1",
        "refseq_category": "na",
        "taxid": "348578",
        "species_taxid": "348578",
        "organism_name": "uncultured Porphyromonadaceae bacterium",
        "infraspecific_name": "",
        "isolate": "SRR16350250_bin.15_metawrap_v1.3_MAG",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/11/27",
        "asm_name": "SRR16350250_bin.15_metawrap_v1.3_MAG",
        "submitter": "EMG",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/947/365/455/GCA_947365455.1_SRR16350250_bin.15_metawrap_v1.3_MAG",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-11-27",
    "dateModified": "2022-11-27",
    "datePublished": "2022-11-27",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Porphyromonadaceae bacterium"
        ],
        "sample_taxid": [
            "348578"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China"
        ],
        "sample_host_location_id": [],
        "data_size": "0.515 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 74.77,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1781669",
        "Number of Sequences": "237",
        "Longest Sequences (bp)": "30502",
        "N50 (bp)": "9623",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "53.0",
        "Number of CDSs": "1305",
        "Average Protein Length": "347.3",
        "Coding Ratio (%)": "76.3",
        "Number of rRNAs": "0",
        "Number of tRNAs": "22",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Duncaniella muris",
                "strain": "strain=DSM 103720",
                "accession": "GCA_003024805.1",
                "taxid": 2094150,
                "species_taxid": 2094150,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.5552,
                "matched_fragments": 59,
                "total_fragments": 469,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paramuribaculum intestinale",
                "strain": "strain=DSM 100749",
                "accession": "GCA_003024925.1",
                "taxid": 2094151,
                "species_taxid": 2094151,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.1749,
                "matched_fragments": 57,
                "total_fragments": 469,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 74.77,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_011959405.1",
                "gtdb_species": "s__UBA3263 sp001689615",
                "ani": 99.0183,
                "matched_fragments": 353,
                "total_fragments": 469,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;g__UBA3263",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.21",
                "min_intra_species_ani": "99.09",
                "mean_intra_species_af": "0.70",
                "min_intra_species_af": "0.66",
                "num_clustered_genomes": 12,
                "status": "conclusive"
            },
            {
                "accession": "GCA_002490725.1",
                "gtdb_species": "s__UBA3263 sp002490725",
                "ani": 78.0008,
                "matched_fragments": 73,
                "total_fragments": 469,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;g__UBA3263",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.93",
                "min_intra_species_ani": "99.92",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.85",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_900759865.1",
                "gtdb_species": "s__UBA3263 sp900759865",
                "ani": 77.4528,
                "matched_fragments": 73,
                "total_fragments": 469,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;g__UBA3263",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_014801955.1",
                "gtdb_species": "s__UBA3263 sp014801955",
                "ani": 77.1502,
                "matched_fragments": 61,
                "total_fragments": 469,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;g__UBA3263",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.82",
                "min_intra_species_ani": "97.69",
                "mean_intra_species_af": "0.84",
                "min_intra_species_af": "0.82",
                "num_clustered_genomes": 6,
                "status": "-"
            },
            {
                "accession": "GCA_014802435.1",
                "gtdb_species": "s__UBA3263 sp014802435",
                "ani": 76.9693,
                "matched_fragments": 51,
                "total_fragments": 469,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;g__UBA3263",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.99",
                "min_intra_species_ani": "97.67",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.83",
                "num_clustered_genomes": 9,
                "status": "-"
            },
            {
                "accession": "GCA_014801075.1",
                "gtdb_species": "s__UBA7173 sp014801075",
                "ani": 76.7207,
                "matched_fragments": 60,
                "total_fragments": 469,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;g__UBA7173",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.74",
                "min_intra_species_ani": "97.55",
                "mean_intra_species_af": "0.90",
                "min_intra_species_af": "0.88",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_009775265.1",
                "gtdb_species": "s__CAG-873 sp009775265",
                "ani": 76.5628,
                "matched_fragments": 52,
                "total_fragments": 469,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;g__CAG-873",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.34",
                "min_intra_species_ani": "99.23",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.92",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCF_003024805.1",
                "gtdb_species": "s__Duncaniella muris",
                "ani": 76.5552,
                "matched_fragments": 59,
                "total_fragments": 469,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;g__Duncaniella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.34",
                "min_intra_species_ani": "97.90",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.80",
                "num_clustered_genomes": 17,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.296,
        "cell_length": 0.109,
        "doubling_h": 0.809,
        "growth_tmp": 36.714,
        "optimum_tmp": 36.937,
        "optimum_ph": 7.462,
        "genome_size": 2637645.685,
        "gc_content": 46.475,
        "coding_genes": 2143.52,
        "rRNA16S_genes": 2.5,
        "tRNA_genes": 49.6,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.1,
        "range_salinity": 0.0,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__Muribaculaceae",
        "g__UBA3263",
        "s__UBA3263 sp001689615"
    ],
    "_genome_taxon": [
        "uncultured",
        "Porphyromonadaceae",
        "bacterium",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__Muribaculaceae",
        "g__UBA3263",
        "s__UBA3263 sp001689615",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Bacteroidales",
        "Muribaculaceae",
        "UBA3263",
        "UBA3263",
        "sp001689615"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}