{
    "type": "genome",
    "identifier": "GCA_947367295.1",
    "organism": "uncultured Alistipes sp.",
    "title": "uncultured Alistipes sp.",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "EMG",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_947367295.1",
        "bioproject": "PRJEB57439",
        "biosample": "SAMEA112146691",
        "wgs_master": "CANBEB000000000.1",
        "refseq_category": "na",
        "taxid": "538949",
        "species_taxid": "538949",
        "organism_name": "uncultured Alistipes sp.",
        "infraspecific_name": "",
        "isolate": "SRR15429246_bin.4_metawrap_v1.3_MAG",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/11/27",
        "asm_name": "SRR15429246_bin.4_metawrap_v1.3_MAG",
        "submitter": "EMG",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/947/367/295/GCA_947367295.1_SRR15429246_bin.4_metawrap_v1.3_MAG",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-11-27",
    "dateModified": "2022-11-27",
    "datePublished": "2022-11-27",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Alistipes sp."
        ],
        "sample_taxid": [
            "538949"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Bangladesh"
        ],
        "sample_host_location_id": [],
        "data_size": "0.515 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 85.61,
        "contamination": 4.17,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1792038",
        "Number of Sequences": "121",
        "Longest Sequences (bp)": "53504",
        "N50 (bp)": "20684",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "49.2",
        "Number of CDSs": "1450",
        "Average Protein Length": "363.8",
        "Coding Ratio (%)": "88.3",
        "Number of rRNAs": "1",
        "Number of tRNAs": "23",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 85.61,
            "contamination": 4.17,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
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                "gtdb_species": "s__Alistipes sp904502285",
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                "total_fragments": 533,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Rikenellaceae;g__Alistipes",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "100.00",
                "min_intra_species_ani": "100.00",
                "mean_intra_species_af": "1.00",
                "min_intra_species_af": "1.00",
                "num_clustered_genomes": 2,
                "status": "conclusive"
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            {
                "accession": "GCA_017555905.1",
                "gtdb_species": "s__Alistipes sp017555905",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Rikenellaceae;g__Alistipes",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
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                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017630455.1",
                "gtdb_species": "s__Alistipes sp017630455",
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                "total_fragments": 533,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Rikenellaceae;g__Alistipes",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017647625.1",
                "gtdb_species": "s__Alistipes sp017647625",
                "ani": 80.9256,
                "matched_fragments": 270,
                "total_fragments": 533,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Rikenellaceae;g__Alistipes",
                "ani_circumscription_radius": 95.0,
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                "min_intra_species_ani": "98.38",
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                "num_clustered_genomes": 2,
                "status": "-"
            },
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                "accession": "GCA_017380955.1",
                "gtdb_species": "s__Alistipes sp017380955",
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                "matched_fragments": 249,
                "total_fragments": 533,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Rikenellaceae;g__Alistipes",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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                "status": "-"
            },
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            },
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            {
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Rikenellaceae;g__Alistipes",
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                "num_clustered_genomes": 2,
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            },
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            },
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            {
                "accession": "GCA_017629035.1",
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            {
                "accession": "GCA_017646625.1",
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        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.6,
        "cell_length": -0.098,
        "doubling_h": null,
        "growth_tmp": 37.0,
        "optimum_tmp": 37.0,
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        "gc_content": 56.414,
        "coding_genes": 2833.0,
        "rRNA16S_genes": 2.0,
        "tRNA_genes": 48.0,
        "gram_stain": 0.166,
        "sporulation": 0.0,
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        "facultative_respiration": 0.0,
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        "bacillus_cell_shape": 0.833,
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    "_gtdb_taxon": [
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        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__Rikenellaceae",
        "g__Alistipes",
        "s__Alistipes sp904502285"
    ],
    "_genome_taxon": [
        "uncultured",
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        "sp.",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__Rikenellaceae",
        "g__Alistipes",
        "s__Alistipes sp904502285",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Bacteroidales",
        "Rikenellaceae",
        "Alistipes",
        "Alistipes",
        "sp904502285"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}