{ "type": "genome", "identifier": "GCA_947384085.1", "organism": "uncultured Erysipelotrichaceae bacterium", "title": "uncultured Erysipelotrichaceae bacterium", "description": "derived from environmental source; derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "EMG", "publication": [ {} ], "properties": { "assembly_accession": "GCA_947384085.1", "bioproject": "PRJEB55478", "biosample": "SAMEA112151369", "wgs_master": "CANDFT000000000.1", "refseq_category": "na", "taxid": "331630", "species_taxid": "331630", "organism_name": "uncultured Erysipelotrichaceae bacterium", "infraspecific_name": "", "isolate": "ERR6760071_bin.12_metawrap_v1.3_MAG", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/11/27", "asm_name": "ERR6760071_bin.12_metawrap_v1.3_MAG", "submitter": "EMG", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/947/384/085/GCA_947384085.1_ERR6760071_bin.12_metawrap_v1.3_MAG", "excluded_from_refseq": "derived from environmental source; derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-11-27", "dateModified": "2022-11-27", "datePublished": "2022-11-27", "_annotation": { "sample_count": 1, "sample_organism": [ "uncultured Erysipelotrichaceae bacterium" ], "sample_taxid": [ "331630" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "USA" ], "sample_host_location_id": [], "data_size": "0.503 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 60.19, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "1839275", "Number of Sequences": "342", "Longest Sequences (bp)": "22293", "N50 (bp)": "5927", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "27.8", "Number of CDSs": "1589", "Average Protein Length": "274.3", "Coding Ratio (%)": "71.1", "Number of rRNAs": "0", "Number of tRNAs": "14", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Longibaculum muris", "strain": "strain=DSM 29487", "accession": "GCA_024622235.1", "taxid": 1796628, "species_taxid": 1796628, "relation_to_type": "type", "validated": true, "ani": 79.735, "matched_fragments": 227, "total_fragments": 445, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Longibaculum muris", "strain": "strain=DSM 29487", "accession": "GCA_004343035.1", "taxid": 1796628, "species_taxid": 1796628, "relation_to_type": "type", "validated": true, "ani": 79.7292, "matched_fragments": 225, "total_fragments": 445, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Coprobacillus cateniformis", "strain": "strain=JCM 10604", "accession": "GCA_001312445.1", "taxid": 100884, "species_taxid": 100884, "relation_to_type": "type", "validated": true, "ani": 79.5425, "matched_fragments": 224, "total_fragments": 445, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Coprobacillus cateniformis", "strain": "strain=RCA1-24", "accession": "GCA_009767585.1", "taxid": 100884, "species_taxid": 100884, "relation_to_type": "type", "validated": true, "ani": 79.5396, "matched_fragments": 232, "total_fragments": 445, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "[Clostridium] spiroforme", "strain": "strain=DSM 1552", "accession": "GCA_000154805.1", "taxid": 29348, "species_taxid": 29348, "relation_to_type": "type", "validated": true, "ani": 77.075, "matched_fragments": 108, "total_fragments": 445, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "[Clostridium] cocleatum", "strain": "strain=DSM 1551", "accession": "GCA_024622895.1", "taxid": 69824, "species_taxid": 69824, "relation_to_type": "type", "validated": true, "ani": 76.9955, "matched_fragments": 94, "total_fragments": 445, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Erysipelatoclostridium ramosum", "strain": "", "accession": "GCA_900660185.1", "taxid": 1547, "species_taxid": 1547, "relation_to_type": "type", "validated": true, "ani": 76.704, "matched_fragments": 93, "total_fragments": 445, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Erysipelatoclostridium ramosum", "strain": "strain=DSM 1402", "accession": "GCA_014131695.1", "taxid": 1547, "species_taxid": 1547, "relation_to_type": "type", "validated": true, "ani": 76.5663, "matched_fragments": 94, "total_fragments": 445, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tannockella kyphosi", "strain": "strain=BP52G", "accession": "GCA_021054785.1", "taxid": 2899121, "species_taxid": 2899121, "relation_to_type": "type", "validated": true, "ani": 76.5014, "matched_fragments": 76, "total_fragments": 445, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Eggerthia catenaformis", "strain": "strain=DSM 20559", "accession": "GCA_000422605.1", "taxid": 31973, "species_taxid": 31973, "relation_to_type": "type", "validated": true, "ani": 76.0964, "matched_fragments": 51, "total_fragments": 445, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 60.19, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_910588075.1", "gtdb_species": "s__MGBC163490 sp910588075", "ani": 98.2506, "matched_fragments": 377, "total_fragments": 445, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Erysipelotrichales;f__Coprobacillaceae;g__MGBC163490", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": 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