{
    "type": "genome",
    "identifier": "GCA_947384285.1",
    "organism": "uncultured Lachnospiraceae bacterium",
    "title": "uncultured Lachnospiraceae bacterium",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "EMG",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_947384285.1",
        "bioproject": "PRJEB55478",
        "biosample": "SAMEA112151376",
        "wgs_master": "CANDGI000000000.1",
        "refseq_category": "na",
        "taxid": "297314",
        "species_taxid": "297314",
        "organism_name": "uncultured Lachnospiraceae bacterium",
        "infraspecific_name": "",
        "isolate": "ERR6760071_bin.51_metawrap_v1.3_MAG",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/11/27",
        "asm_name": "ERR6760071_bin.51_metawrap_v1.3_MAG",
        "submitter": "EMG",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/947/384/285/GCA_947384285.1_ERR6760071_bin.51_metawrap_v1.3_MAG",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-11-27",
    "dateModified": "2022-11-27",
    "datePublished": "2022-11-27",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Lachnospiraceae bacterium"
        ],
        "sample_taxid": [
            "297314"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA"
        ],
        "sample_host_location_id": [],
        "data_size": "0.916 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 97.92,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3232474",
        "Number of Sequences": "74",
        "Longest Sequences (bp)": "206589",
        "N50 (bp)": "68820",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "45.4",
        "Number of CDSs": "2918",
        "Average Protein Length": "321.6",
        "Coding Ratio (%)": "87.1",
        "Number of rRNAs": "0",
        "Number of tRNAs": "30",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Eisenbergiella porci",
                "strain": "strain=WCA-389-WT-23B",
                "accession": "GCA_009696275.1",
                "taxid": 2652274,
                "species_taxid": 2652274,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.3696,
                "matched_fragments": 52,
                "total_fragments": 1036,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseburia intestinalis",
                "strain": "strain=L1 82",
                "accession": "GCA_025151715.1",
                "taxid": 166486,
                "species_taxid": 166486,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.3661,
                "matched_fragments": 65,
                "total_fragments": 1036,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Eisenbergiella massiliensis",
                "strain": "strain=AT11",
                "accession": "GCA_900243045.1",
                "taxid": 1720294,
                "species_taxid": 1720294,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.1951,
                "matched_fragments": 64,
                "total_fragments": 1036,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Blautia pseudococcoides",
                "strain": "strain=YL58",
                "accession": "GCA_001689125.2",
                "taxid": 1796616,
                "species_taxid": 1796616,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.8254,
                "matched_fragments": 50,
                "total_fragments": 1036,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Eisenbergiella tayi",
                "strain": "strain=DSM 26961",
                "accession": "GCA_001881565.1",
                "taxid": 1432052,
                "species_taxid": 1432052,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.7716,
                "matched_fragments": 57,
                "total_fragments": 1036,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 97.92,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
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                "accession": "GCA_000403255.2",
                "gtdb_species": "s__14-2 sp000403255",
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                "matched_fragments": 725,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__14-2",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.01",
                "min_intra_species_ani": "99.01",
                "mean_intra_species_af": "0.96",
                "min_intra_species_af": "0.96",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_910575555.1",
                "gtdb_species": "s__14-2 sp011960065",
                "ani": 80.0135,
                "matched_fragments": 569,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__14-2",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.61",
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                "min_intra_species_af": "0.76",
                "num_clustered_genomes": 7,
                "status": "-"
            },
            {
                "accession": "GCA_910584585.1",
                "gtdb_species": "s__14-2 sp910584585",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__14-2",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_004793545.1",
                "gtdb_species": "s__14-2 sp004793545",
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                "total_fragments": 1036,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__14-2",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_000403315.2",
                "gtdb_species": "s__14-2 sp000403315",
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                "matched_fragments": 548,
                "total_fragments": 1036,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__14-2",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.01",
                "min_intra_species_ani": "98.74",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.92",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCF_000403845.2",
                "gtdb_species": "s__14-2 sp000403845",
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                "matched_fragments": 482,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__14-2",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "status": "-"
            },
            {
                "accession": "GCA_910580195.1",
                "gtdb_species": "s__14-2 sp910580195",
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                "mean_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCA_910585295.1",
                "gtdb_species": "s__14-2 sp009774455",
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                "min_intra_species_af": "0.81",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_910575155.1",
                "gtdb_species": "s__14-2 sp910575155",
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                "matched_fragments": 264,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__14-2",
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                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_910575075.1",
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            {
                "accession": "GCA_910588845.1",
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            },
            {
                "accession": "GCA_910577785.1",
                "gtdb_species": "s__14-2 sp910577785",
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                "matched_fragments": 235,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__14-2",
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                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_910588885.1",
                "gtdb_species": "s__14-2 sp910588885",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__14-2",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.239,
        "cell_length": 0.277,
        "doubling_h": 0.394,
        "growth_tmp": 37.0,
        "optimum_tmp": 36.16,
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        "genome_size": 3641163.5,
        "gc_content": 42.852,
        "coding_genes": 3283.347,
        "rRNA16S_genes": 6.0,
        "tRNA_genes": 63.727,
        "gram_stain": 0.885,
        "sporulation": 0.414,
        "motility": 0.448,
        "range_salinity": 0.0,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 0.988,
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        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 0.8,
        "coccus_cell_shape": 0.133,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.033,
        "vibrio_cell_shape": 0.033,
        "spiral_cell_shape": 0.0
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    "_gtdb_taxon": [
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        "p__Bacillota_A",
        "c__Clostridia",
        "o__Lachnospirales",
        "f__Lachnospiraceae",
        "g__Petralouisia",
        "s__Petralouisia sp947384285"
    ],
    "_genome_taxon": [
        "uncultured",
        "Lachnospiraceae",
        "bacterium",
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Lachnospirales",
        "f__Lachnospiraceae",
        "g__Petralouisia",
        "s__Petralouisia sp947384285",
        "Bacteria",
        "Bacillota",
        "A",
        "Clostridia",
        "Lachnospirales",
        "Lachnospiraceae",
        "Petralouisia",
        "Petralouisia",
        "sp947384285"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}