{
    "type": "genome",
    "identifier": "GCA_947428855.1",
    "organism": "uncultured Alistipes sp.",
    "title": "uncultured Alistipes sp.",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "EMG",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_947428855.1",
        "bioproject": "PRJEB57762",
        "biosample": "SAMEA112165093",
        "wgs_master": "CANENK000000000.1",
        "refseq_category": "na",
        "taxid": "538949",
        "species_taxid": "538949",
        "organism_name": "uncultured Alistipes sp.",
        "infraspecific_name": "",
        "isolate": "SRR12506361_bin.10_metawrap_v1.3_MAG",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/11/29",
        "asm_name": "SRR12506361_bin.10_metawrap_v1.3_MAG",
        "submitter": "EMG",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/947/428/855/GCA_947428855.1_SRR12506361_bin.10_metawrap_v1.3_MAG",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-11-29",
    "dateModified": "2022-11-29",
    "datePublished": "2022-11-29",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Alistipes sp."
        ],
        "sample_taxid": [
            "538949"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "not provided"
        ],
        "sample_host_location_id": [],
        "data_size": "0.449 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 49.25,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1576008",
        "Number of Sequences": "300",
        "Longest Sequences (bp)": "28524",
        "N50 (bp)": "5696",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "58.5",
        "Number of CDSs": "1176",
        "Average Protein Length": "320.7",
        "Coding Ratio (%)": "71.8",
        "Number of rRNAs": "0",
        "Number of tRNAs": "16",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Alistipes onderdonkii",
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                "accession": "GCA_025145285.1",
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                "species_taxid": 328813,
                "relation_to_type": "type",
                "validated": true,
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                "total_fragments": 376,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Alistipes onderdonkii",
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                "accession": "GCA_000374505.1",
                "taxid": 328813,
                "species_taxid": 328813,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.1213,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Alistipes shahii",
                "strain": "strain=WAL 8301",
                "accession": "GCA_000210575.1",
                "taxid": 328814,
                "species_taxid": 328814,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 78.0833,
                "matched_fragments": 135,
                "total_fragments": 376,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Alistipes senegalensis",
                "strain": "strain=JC50",
                "accession": "GCA_025145645.1",
                "taxid": 1288121,
                "species_taxid": 1288121,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.0662,
                "matched_fragments": 141,
                "total_fragments": 376,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Alistipes shahii",
                "strain": "strain=WAL 8301",
                "accession": "GCA_025145845.1",
                "taxid": 328814,
                "species_taxid": 328814,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 78.0097,
                "matched_fragments": 137,
                "total_fragments": 376,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Alistipes finegoldii",
                "strain": "strain=DSM 17242",
                "accession": "GCA_000265365.1",
                "taxid": 214856,
                "species_taxid": 214856,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.0068,
                "matched_fragments": 113,
                "total_fragments": 376,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Alistipes dispar",
                "strain": "strain=5CPEGH6",
                "accession": "GCA_006542685.1",
                "taxid": 2585119,
                "species_taxid": 2585119,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.9775,
                "matched_fragments": 127,
                "total_fragments": 376,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Alistipes timonensis",
                "strain": "strain=DSM 25383",
                "accession": "GCA_900107675.1",
                "taxid": 1465754,
                "species_taxid": 1465754,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.8763,
                "matched_fragments": 125,
                "total_fragments": 376,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Alistipes communis",
                "strain": "strain=5CBH24",
                "accession": "GCA_006542665.1",
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                "species_taxid": 2585118,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.8131,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Alistipes onderdonkii subsp. vulgaris",
                "strain": "strain=3BBH6",
                "accession": "GCA_006542645.1",
                "taxid": 2585117,
                "species_taxid": 328813,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.651,
                "matched_fragments": 109,
                "total_fragments": 376,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 49.25,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
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        "gtdb_result": [
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                "accession": "GCA_910587675.1",
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                "matched_fragments": 372,
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Rikenellaceae;g__Alistipes",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCA_900546065.1",
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                "matched_fragments": 221,
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Rikenellaceae;g__Alistipes",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.89",
                "min_intra_species_ani": "97.88",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.90",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_902362705.1",
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                "total_fragments": 376,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Rikenellaceae;g__Alistipes",
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                "mean_intra_species_ani": "99.62",
                "min_intra_species_ani": "98.83",
                "mean_intra_species_af": "0.97",
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                "num_clustered_genomes": 7,
                "status": "-"
            },
            {
                "accession": "GCA_910575495.1",
                "gtdb_species": "s__Alistipes sp910575495",
                "ani": 78.3124,
                "matched_fragments": 114,
                "total_fragments": 376,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Rikenellaceae;g__Alistipes",
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                "mean_intra_species_ani": "99.23",
                "min_intra_species_ani": "98.47",
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                "num_clustered_genomes": 3,
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            },
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                "accession": "GCA_910576555.1",
                "gtdb_species": "s__Alistipes sp910576555",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Rikenellaceae;g__Alistipes",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_900544265.1",
                "gtdb_species": "s__Alistipes merdavium",
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                "num_clustered_genomes": 5,
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            },
            {
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Rikenellaceae;g__Alistipes",
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            },
            {
                "accession": "GCA_009774895.1",
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            },
            {
                "accession": "GCA_019115605.1",
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                "mean_intra_species_ani": "N/A",
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            {
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            },
            {
                "accession": "GCA_019119615.1",
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        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.6,
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        "coding_genes": 2833.0,
        "rRNA16S_genes": 2.0,
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        "bacillus_cell_shape": 0.833,
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    "_gtdb_taxon": [
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        "p__Bacteroidota",
        "c__Bacteroidia",
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        "g__Alistipes",
        "s__Alistipes sp910587675"
    ],
    "_genome_taxon": [
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        "sp.",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__Rikenellaceae",
        "g__Alistipes",
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        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
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        "Rikenellaceae",
        "Alistipes",
        "Alistipes",
        "sp910587675"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}