{
    "type": "genome",
    "identifier": "GCA_947445565.1",
    "organism": "Betaproteobacteria bacterium",
    "title": "Betaproteobacteria bacterium",
    "description": "derived from metagenome; fragmented assembly; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_947445565.1",
        "bioproject": "PRJEB35770",
        "biosample": "SAMEA112172261",
        "wgs_master": "CANFEV000000000.1",
        "refseq_category": "na",
        "taxid": "1891241",
        "species_taxid": "1891241",
        "organism_name": "Betaproteobacteria bacterium",
        "infraspecific_name": "",
        "isolate": "CH-Jul18-59",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/12/02",
        "asm_name": "CH-Jul18-59",
        "submitter": "BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/947/445/565/GCA_947445565.1_CH-Jul18-59",
        "excluded_from_refseq": "derived from metagenome; fragmented assembly; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-12-02",
    "dateModified": "2022-12-02",
    "datePublished": "2022-12-02",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Betaproteobacteria bacterium"
        ],
        "sample_taxid": [
            "1891241"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Switzerland"
        ],
        "sample_host_location_id": [],
        "data_size": "0.651 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 15.91,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2329186",
        "Number of Sequences": "461",
        "Longest Sequences (bp)": "23589",
        "N50 (bp)": "4971",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "63.0",
        "Number of CDSs": "1948",
        "Average Protein Length": "282.5",
        "Coding Ratio (%)": "70.9",
        "Number of rRNAs": "0",
        "Number of tRNAs": "15",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "relation_to_type": "type",
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                "ani_threshold": 95,
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            {
                "organism_name": "Aromatoleum tolulyticum",
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                "species_taxid": 34027,
                "relation_to_type": "type",
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            {
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Thauera butanivorans",
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                "accession": "GCA_001591165.1",
                "taxid": 86174,
                "species_taxid": 86174,
                "relation_to_type": "type",
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                "matched_fragments": 76,
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            },
            {
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                "accession": "GCA_004345725.1",
                "taxid": 1452487,
                "species_taxid": 1452487,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.1608,
                "matched_fragments": 80,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Aromatoleum toluolicum",
                "strain": "strain=T",
                "accession": "GCA_012911005.2",
                "taxid": 90060,
                "species_taxid": 90060,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.0326,
                "matched_fragments": 86,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cupriavidus malaysiensis",
                "strain": "strain=USMAA1020",
                "accession": "GCA_001854325.1",
                "taxid": 367825,
                "species_taxid": 367825,
                "relation_to_type": "type",
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                "matched_fragments": 113,
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                "ani_threshold": 95,
                "status": "below_threshold"
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        "cc_result": {
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            "contamination": 0.0,
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        "gtdb_result": [
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                "accession": "GCA_903889565.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-41;g__PALSA-1004",
                "ani_circumscription_radius": 95.0,
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                "mean_intra_species_af": "0.96",
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                "status": "-"
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            },
            {
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_003153455.1",
                "gtdb_species": "s__PALSA-1004 sp003153455",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-41;g__PALSA-1004",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCA_011046905.1",
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                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_001771985.1",
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                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCA_001897745.1",
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            },
            {
                "accession": "GCA_014860355.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-39;g__2-12-FULL-64-23",
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                "mean_intra_species_ani": "N/A",
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            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Burkholderiales",
        "f__SG8-41",
        "g__PALSA-1004",
        "s__"
    ],
    "_genome_taxon": [
        "Betaproteobacteria",
        "bacterium",
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Burkholderiales",
        "f__SG8-41",
        "g__PALSA-1004",
        "s__",
        "Bacteria",
        "Pseudomonadota",
        "Gammaproteobacteria",
        "Burkholderiales",
        "SG8-41",
        "PALSA-1004",
        "s",
        "",
        ""
    ],
    "_meo": [
        {
            "id": "MEO_0000038",
            "label": "freshwater"
        },
        {
            "id": "MEO_0000024",
            "label": "lake"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}