{
    "type": "genome",
    "identifier": "GCA_947445685.1",
    "organism": "Acidobacteriaceae bacterium",
    "title": "Acidobacteriaceae bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_947445685.1",
        "bioproject": "PRJEB35770",
        "biosample": "SAMEA112172223",
        "wgs_master": "CANFEM000000000.1",
        "refseq_category": "na",
        "taxid": "2052142",
        "species_taxid": "2052142",
        "organism_name": "Acidobacteriaceae bacterium",
        "infraspecific_name": "",
        "isolate": "CH-Jul18-202",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/12/02",
        "asm_name": "CH-Jul18-202",
        "submitter": "BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/947/445/685/GCA_947445685.1_CH-Jul18-202",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-12-02",
    "dateModified": "2022-12-02",
    "datePublished": "2022-12-02",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Acidobacteriaceae bacterium"
        ],
        "sample_taxid": [
            "2052142"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Switzerland"
        ],
        "sample_host_location_id": [],
        "data_size": "0.663 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 87.5,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2374872",
        "Number of Sequences": "356",
        "Longest Sequences (bp)": "26725",
        "N50 (bp)": "7494",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "65.2",
        "Number of CDSs": "1860",
        "Average Protein Length": "325.5",
        "Coding Ratio (%)": "76.5",
        "Number of rRNAs": "1",
        "Number of tRNAs": "25",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Luteitalea pratensis",
                "strain": "strain=DSM 100886; HEG_-6_39",
                "accession": "GCA_001618865.1",
                "taxid": 1855912,
                "species_taxid": 1855912,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.6307,
                "matched_fragments": 113,
                "total_fragments": 636,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Corallococcus sicarius",
                "strain": "strain=CA040B",
                "accession": "GCA_003611735.1",
                "taxid": 2316726,
                "species_taxid": 2316726,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.0814,
                "matched_fragments": 57,
                "total_fragments": 636,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Azospirillum agricola",
                "strain": "strain=CC-HIH038",
                "accession": "GCA_017876095.1",
                "taxid": 1720247,
                "species_taxid": 1720247,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.0495,
                "matched_fragments": 62,
                "total_fragments": 636,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 87.5,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
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                "accession": "GCA_002737365.1",
                "gtdb_species": "s__12-FULL-67-14b sp002737365",
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                "total_fragments": 636,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA2999;g__12-FULL-67-14b",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.27",
                "min_intra_species_ani": "96.58",
                "mean_intra_species_af": "0.83",
                "min_intra_species_af": "0.80",
                "num_clustered_genomes": 6,
                "status": "conclusive"
            },
            {
                "accession": "GCA_009694735.1",
                "gtdb_species": "s__12-FULL-67-14b sp009694735",
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                "matched_fragments": 425,
                "total_fragments": 636,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA2999;g__12-FULL-67-14b",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_001768615.1",
                "gtdb_species": "s__12-FULL-67-14b sp001768615",
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                "matched_fragments": 406,
                "total_fragments": 636,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA2999;g__12-FULL-67-14b",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016871275.1",
                "gtdb_species": "s__12-FULL-67-14b sp016871275",
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                "matched_fragments": 363,
                "total_fragments": 636,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA2999;g__12-FULL-67-14b",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016789705.1",
                "gtdb_species": "s__CADEFD01 sp016789705",
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                "matched_fragments": 236,
                "total_fragments": 636,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA2999;g__CADEFD01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902826065.1",
                "gtdb_species": "s__CADEFD01 sp902826065",
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                "matched_fragments": 219,
                "total_fragments": 636,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA2999;g__CADEFD01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_018000455.1",
                "gtdb_species": "s__CADEFD01 sp018000455",
                "ani": 77.6807,
                "matched_fragments": 226,
                "total_fragments": 636,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA2999;g__CADEFD01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016871195.1",
                "gtdb_species": "s__VFZN01 sp016871195",
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                "matched_fragments": 174,
                "total_fragments": 636,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA2999;g__VFZN01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
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            },
            {
                "accession": "GCA_902826515.1",
                "gtdb_species": "s__CADEFD01 sp902826515",
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                "matched_fragments": 241,
                "total_fragments": 636,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA2999;g__CADEFD01",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016210845.1",
                "gtdb_species": "s__Gp6-AA40 sp016210845",
                "ani": 76.9868,
                "matched_fragments": 103,
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                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA2999;g__Gp6-AA40",
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                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_013813075.1",
                "gtdb_species": "s__JACCSI01 sp013813075",
                "ani": 76.8787,
                "matched_fragments": 96,
                "total_fragments": 636,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA2999;g__JACCSI01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCA_013362195.1",
                "gtdb_species": "s__QHWT01 sp013362195",
                "ani": 76.2104,
                "matched_fragments": 94,
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                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__2-12-FULL-66-21;g__QHWT01",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.219,
        "cell_length": 0.203,
        "doubling_h": 1.138,
        "growth_tmp": 24.739,
        "optimum_tmp": 23.933,
        "optimum_ph": 4.825,
        "genome_size": 5521971.95,
        "gc_content": 60.4,
        "coding_genes": 3773.833,
        "rRNA16S_genes": 1.5,
        "tRNA_genes": 49.0,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.214,
        "range_salinity": null,
        "facultative_respiration": 0.058,
        "anaerobic_respiration": 0.0,
        "aerobic_respiration": 0.941,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Acidobacteriota",
        "c__Vicinamibacteria",
        "o__Vicinamibacterales",
        "f__UBA2999",
        "g__12-FULL-67-14b",
        "s__12-FULL-67-14b sp002737365"
    ],
    "_genome_taxon": [
        "Acidobacteriaceae",
        "bacterium",
        "d__Bacteria",
        "p__Acidobacteriota",
        "c__Vicinamibacteria",
        "o__Vicinamibacterales",
        "f__UBA2999",
        "g__12-FULL-67-14b",
        "s__12-FULL-67-14b sp002737365",
        "Bacteria",
        "Acidobacteriota",
        "Vicinamibacteria",
        "Vicinamibacterales",
        "UBA2999",
        "12-FULL-67-14b",
        "12-FULL-67-14b",
        "sp002737365"
    ],
    "_meo": [
        {
            "id": "MEO_0000038",
            "label": "freshwater"
        },
        {
            "id": "MEO_0000024",
            "label": "lake"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}