{
    "type": "genome",
    "identifier": "GCA_947448355.1",
    "organism": "Comamonadaceae bacterium",
    "title": "Comamonadaceae bacterium",
    "description": "derived from metagenome; fragmented assembly; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Institute of Hydrobiology, Department of Aquatic Microbial Ecology, Biology Centre, CAS",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_947448355.1",
        "bioproject": "PRJNA429145",
        "biosample": "SAMEA112172565",
        "wgs_master": "CANFMZ000000000.1",
        "refseq_category": "na",
        "taxid": "1871071",
        "species_taxid": "1871071",
        "organism_name": "Comamonadaceae bacterium",
        "infraspecific_name": "",
        "isolate": "Jr-12mar18-45",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/12/02",
        "asm_name": "Jr-12mar18-45",
        "submitter": "Institute of Hydrobiology, Department of Aquatic Microbial Ecology, Biology Centre, CAS",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/947/448/355/GCA_947448355.1_Jr-12mar18-45",
        "excluded_from_refseq": "derived from metagenome; fragmented assembly; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-12-02",
    "dateModified": "2022-12-02",
    "datePublished": "2022-12-02",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Comamonadaceae bacterium"
        ],
        "sample_taxid": [
            "1871071"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Czech Republic"
        ],
        "sample_host_location_id": [],
        "data_size": "0.408 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 42.05,
        "contamination": 11.11,
        "strain_heterogeneity": 50.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1421449",
        "Number of Sequences": "299",
        "Longest Sequences (bp)": "15284",
        "N50 (bp)": "4690",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "50.3",
        "Number of CDSs": "1098",
        "Average Protein Length": "296.4",
        "Coding Ratio (%)": "68.7",
        "Number of rRNAs": "0",
        "Number of tRNAs": "12",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "relation_to_type": "type",
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                "ani_threshold": 95,
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            },
            {
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            {
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Rhodoferax ferrireducens",
                "strain": "strain=DSM 15236",
                "accession": "GCA_000013605.1",
                "taxid": 192843,
                "species_taxid": 192843,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.6329,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Rhodoferax lacus",
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                "taxid": 2184758,
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                "matched_fragments": 60,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Limnohabitans parvus",
                "strain": "strain=II-B4",
                "accession": "GCA_003063455.1",
                "taxid": 540061,
                "species_taxid": 540061,
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                "matched_fragments": 62,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Rhodoferax saidenbachensis",
                "strain": "strain=ED16",
                "accession": "GCA_000498435.1",
                "taxid": 1484693,
                "species_taxid": 1484693,
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                "ani": 76.3346,
                "matched_fragments": 64,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Rhodoferax saidenbachensis",
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                "accession": "GCA_001955715.1",
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                "matched_fragments": 65,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Acidovorax carolinensis",
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                "accession": "GCA_002157145.1",
                "taxid": 553814,
                "species_taxid": 553814,
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                "mean_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
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                "mean_intra_species_ani": "N/A",
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            {
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            {
                "accession": "GCA_001795455.1",
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        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.247,
        "cell_length": 0.176,
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        "mesophilic_range_tmp": 0.96,
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        "bacillus_cell_shape": 0.855,
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    "_gtdb_taxon": [
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        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Burkholderiales",
        "f__Burkholderiaceae",
        "g__JAAFJR01",
        "s__"
    ],
    "_genome_taxon": [
        "Comamonadaceae",
        "bacterium",
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Burkholderiales",
        "f__Burkholderiaceae",
        "g__JAAFJR01",
        "s__",
        "Bacteria",
        "Pseudomonadota",
        "Gammaproteobacteria",
        "Burkholderiales",
        "Burkholderiaceae",
        "JAAFJR01",
        "s",
        "",
        ""
    ],
    "_meo": [
        {
            "id": "MEO_0000038",
            "label": "freshwater"
        },
        {
            "id": "MEO_0000024",
            "label": "lake"
        }
    ],
    "quality": 1,
    "quality_label": "\u2b50\ufe0f"
}