{
    "type": "genome",
    "identifier": "GCA_947451585.1",
    "organism": "Chitinophagaceae bacterium",
    "title": "Chitinophagaceae bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Institute of Hydrobiology, Department of Aquatic Microbial Ecology, Biology Centre, CAS",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_947451585.1",
        "bioproject": "PRJNA429145",
        "biosample": "SAMEA112172908",
        "wgs_master": "CANFZW000000000.1",
        "refseq_category": "na",
        "taxid": "1869212",
        "species_taxid": "1869212",
        "organism_name": "Chitinophagaceae bacterium",
        "infraspecific_name": "",
        "isolate": "Jr-20nov17-44",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/12/02",
        "asm_name": "Jr-20nov17-44",
        "submitter": "Institute of Hydrobiology, Department of Aquatic Microbial Ecology, Biology Centre, CAS",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/947/451/585/GCA_947451585.1_Jr-20nov17-44",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-12-02",
    "dateModified": "2022-12-02",
    "datePublished": "2022-12-02",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Chitinophagaceae bacterium"
        ],
        "sample_taxid": [
            "1869212"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Czech Republic"
        ],
        "sample_host_location_id": [],
        "data_size": "1.225 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 84.13,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "4265205",
        "Number of Sequences": "292",
        "Longest Sequences (bp)": "147627",
        "N50 (bp)": "22520",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "45.3",
        "Number of CDSs": "3399",
        "Average Protein Length": "321.2",
        "Coding Ratio (%)": "76.8",
        "Number of rRNAs": "0",
        "Number of tRNAs": "30",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Flavipsychrobacter stenotrophus",
                "strain": "strain=RB1R16",
                "accession": "GCA_002954265.1",
                "taxid": 2077091,
                "species_taxid": 2077091,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.3118,
                "matched_fragments": 141,
                "total_fragments": 1294,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 84.13,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
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                "accession": "GCA_903887415.1",
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                "total_fragments": 1294,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Flavipsychrobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.97",
                "min_intra_species_ani": "99.94",
                "mean_intra_species_af": "0.98",
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                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Flavipsychrobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "status": "-"
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Flavipsychrobacter",
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                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_903851455.1",
                "gtdb_species": "s__Flavipsychrobacter sp903851455",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Flavipsychrobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_903821975.1",
                "gtdb_species": "s__Flavipsychrobacter sp903821975",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Flavipsychrobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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            },
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                "status": "-"
            },
            {
                "accession": "GCA_013288285.1",
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                "mean_intra_species_ani": "N/A",
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            },
            {
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Flavipsychrobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.41",
                "min_intra_species_ani": "96.14",
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            },
            {
                "accession": "GCA_013285595.1",
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        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.322,
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        "bacillus_cell_shape": 1.0,
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        "o__Chitinophagales",
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        "s__Flavipsychrobacter sp947446645"
    ],
    "_genome_taxon": [
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        "bacterium",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Chitinophagales",
        "f__Chitinophagaceae",
        "g__Flavipsychrobacter",
        "s__Flavipsychrobacter sp947446645",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Chitinophagales",
        "Chitinophagaceae",
        "Flavipsychrobacter",
        "Flavipsychrobacter",
        "sp947446645"
    ],
    "_meo": [
        {
            "id": "MEO_0000038",
            "label": "freshwater"
        },
        {
            "id": "MEO_0000024",
            "label": "lake"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}