{ "type": "genome", "identifier": "GCA_947451835.1", "organism": "Microbacteriaceae bacterium", "title": "Microbacteriaceae bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO", "publication": [ {} ], "properties": { "assembly_accession": "GCA_947451835.1", "bioproject": "PRJEB35770", "biosample": "SAMEA112173105", "wgs_master": "CANGAR000000000.1", "refseq_category": "na", "taxid": "1873462", "species_taxid": "1873462", "organism_name": "Microbacteriaceae bacterium", "infraspecific_name": "", "isolate": "Jr-28aug17-251", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/12/02", "asm_name": "Jr-28aug17-251", "submitter": "BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/947/451/835/GCA_947451835.1_Jr-28aug17-251", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-12-02", "dateModified": "2022-12-02", "datePublished": "2022-12-02", "_annotation": { "sample_count": 1, "sample_organism": [ "Microbacteriaceae bacterium" ], "sample_taxid": [ "1873462" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Czech Republic" ], "sample_host_location_id": [], "data_size": "0.340 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 88.13, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": 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"below_threshold" }, { "organism_name": "Rathayibacter festucae", "strain": "strain=DSM 15932", "accession": "GCA_004011135.1", "taxid": 110937, "species_taxid": 110937, "relation_to_type": "type", "validated": true, "ani": 76.5246, "matched_fragments": 54, "total_fragments": 367, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microterricola viridarii", "strain": "strain=DSM 21772", "accession": "GCA_900104895.1", "taxid": 412690, "species_taxid": 412690, "relation_to_type": "type", "validated": true, "ani": 76.5079, "matched_fragments": 54, "total_fragments": 367, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microterricola pindariensis", "strain": "strain=PON 10", "accession": "GCA_002936985.1", "taxid": 478010, "species_taxid": 478010, "relation_to_type": "type", "validated": true, "ani": 76.435, "matched_fragments": 54, "total_fragments": 367, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 88.13, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_903820955.1", "gtdb_species": "s__Rhodoluna sp903820955", "ani": 97.263, "matched_fragments": 267, "total_fragments": 367, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Rhodoluna", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.52", "min_intra_species_ani": "98.11", "mean_intra_species_af": "0.83", "min_intra_species_af": "0.79", "num_clustered_genomes": 6, "status": "inconclusive" }, { "accession": "GCA_009698805.1", "gtdb_species": "s__Rhodoluna sp009698805", "ani": 95.9905, "matched_fragments": 274, "total_fragments": 367, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Rhodoluna", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", 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