{
    "type": "genome",
    "identifier": "GCA_947459535.1",
    "organism": "Rickettsiales bacterium",
    "title": "Rickettsiales bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_947459535.1",
        "bioproject": "PRJEB35770",
        "biosample": "SAMEA112173583",
        "wgs_master": "CANHDY000000000.1",
        "refseq_category": "na",
        "taxid": "2026788",
        "species_taxid": "2026788",
        "organism_name": "Rickettsiales bacterium",
        "infraspecific_name": "",
        "isolate": "RE-15aug16-6",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/12/02",
        "asm_name": "RE-15aug16-6",
        "submitter": "BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/947/459/535/GCA_947459535.1_RE-15aug16-6",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-12-02",
    "dateModified": "2022-12-02",
    "datePublished": "2022-12-02",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Rickettsiales bacterium"
        ],
        "sample_taxid": [
            "2026788"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Czech Republic"
        ],
        "sample_host_location_id": [],
        "data_size": "0.536 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 87.5,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1888775",
        "Number of Sequences": "130",
        "Longest Sequences (bp)": "69739",
        "N50 (bp)": "19624",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "54.2",
        "Number of CDSs": "1890",
        "Average Protein Length": "287.3",
        "Coding Ratio (%)": "86.3",
        "Number of rRNAs": "0",
        "Number of tRNAs": "33",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 87.5,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_019243895.1",
                "gtdb_species": "s__JAFATP01 sp019243895",
                "ani": 75.79,
                "matched_fragments": 65,
                "total_fragments": 571,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__SXRF01;g__JAFATP01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.42,
        "cell_length": -0.048,
        "doubling_h": 1.099,
        "growth_tmp": 34.8,
        "optimum_tmp": 35.2,
        "optimum_ph": 7.283,
        "genome_size": 1329876.456,
        "gc_content": 33.926,
        "coding_genes": 1120.069,
        "rRNA16S_genes": 1.0,
        "tRNA_genes": 34.221,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.041,
        "range_salinity": 0.0,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 0.0,
        "aerobic_respiration": 1.0,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 0.782,
        "coccus_cell_shape": 0.173,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.043,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Alphaproteobacteria",
        "o__Rickettsiales",
        "f__SXRF01",
        "g__JAJTHB01",
        "s__JAJTHB01 sp947459535"
    ],
    "_genome_taxon": [
        "Rickettsiales",
        "bacterium",
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Alphaproteobacteria",
        "o__Rickettsiales",
        "f__SXRF01",
        "g__JAJTHB01",
        "s__JAJTHB01 sp947459535",
        "Bacteria",
        "Pseudomonadota",
        "Alphaproteobacteria",
        "Rickettsiales",
        "SXRF01",
        "JAJTHB01",
        "JAJTHB01",
        "sp947459535"
    ],
    "_meo": [
        {
            "id": "MEO_0000038",
            "label": "freshwater"
        },
        {
            "id": "MEO_0000024",
            "label": "lake"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}