{ "type": "genome", "identifier": "GCA_947465645.1", "organism": "Acidobacteriota bacterium", "title": "Acidobacteriota bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO", "publication": [ {} ], "properties": { "assembly_accession": "GCA_947465645.1", "bioproject": "PRJEB35770", "biosample": "SAMEA112172179", "wgs_master": "CANIBQ000000000.1", "refseq_category": "na", "taxid": "1978231", "species_taxid": "1978231", "organism_name": "Acidobacteriota bacterium", "infraspecific_name": "", "isolate": "CH-Jul18-126", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/12/04", "asm_name": "CH-Jul18-126", "submitter": "BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/947/465/645/GCA_947465645.1_CH-Jul18-126", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-12-04", "dateModified": "2022-12-04", "datePublished": "2022-12-04", "_annotation": { "sample_count": 1, "sample_organism": [ "Acidobacteriota bacterium" ], "sample_taxid": [ "1978231" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Switzerland" ], "sample_host_location_id": [], "data_size": "1.545 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 46.53, "contamination": 4.17, "strain_heterogeneity": 100.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { 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"ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Caballeronia catudaia", "strain": "", "accession": "GCA_001544755.2", "taxid": 1777136, "species_taxid": 1777136, "relation_to_type": "type", "validated": true, "ani": 75.1172, "matched_fragments": 81, "total_fragments": 1752, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vulgatibacter incomptus", "strain": "strain=DSM 27710", "accession": "GCA_001263175.1", "taxid": 1391653, "species_taxid": 1391653, "relation_to_type": "type", "validated": true, "ani": 75.1076, "matched_fragments": 90, "total_fragments": 1752, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tahibacter caeni", "strain": "strain=BUT-6", "accession": "GCA_024609805.1", "taxid": 1453545, "species_taxid": 1453545, "relation_to_type": "type", "validated": true, "ani": 75.1048, "matched_fragments": 141, "total_fragments": 1752, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cohnella xylanilytica", "strain": "strain=DSM 25239", "accession": "GCA_014212175.1", "taxid": 557555, "species_taxid": 557555, "relation_to_type": "type", "validated": true, "ani": 75.0582, "matched_fragments": 57, "total_fragments": 1752, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halorhodospira neutriphila", "strain": "strain=DSM 15116", "accession": "GCA_016584055.1", "taxid": 168379, "species_taxid": 168379, "relation_to_type": "type", "validated": true, "ani": 75.0538, "matched_fragments": 61, "total_fragments": 1752, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stigmatella erecta", "strain": "strain=DSM 16858", "accession": "GCA_900111745.1", "taxid": 83460, "species_taxid": 83460, "relation_to_type": "type", "validated": true, "ani": 75.0398, "matched_fragments": 109, "total_fragments": 1752, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corallococcus soli", "strain": "strain=ZKHCc1 1396", "accession": "GCA_014930455.1", "taxid": 2710757, "species_taxid": 2710757, "relation_to_type": "type", "validated": true, "ani": 75.0226, "matched_fragments": 124, "total_fragments": 1752, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Massilia rhizosphaerae", "strain": "strain=NEAU-GH312", "accession": "GCA_016093545.1", "taxid": 2784389, "species_taxid": 2784389, "relation_to_type": "type", "validated": true, "ani": 75.0099, "matched_fragments": 140, "total_fragments": 1752, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces plumbidurans", "strain": "strain=KC 17012", "accession": "GCA_019857225.1", "taxid": 2814589, "species_taxid": 2814589, "relation_to_type": "type", "validated": true, "ani": 75.0065, "matched_fragments": 110, "total_fragments": 1752, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Caballeronia temeraria", "strain": "", "accession": "GCA_001544795.2", "taxid": 1777137, "species_taxid": 1777137, "relation_to_type": "type", "validated": true, "ani": 74.9974, "matched_fragments": 90, "total_fragments": 1752, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mangrovactinospora gilvigriseus", "strain": "strain=MUSC 26", "accession": "GCA_001879105.1", "taxid": 1428644, "species_taxid": 1428644, "relation_to_type": "type", "validated": true, "ani": 74.9261, "matched_fragments": 105, "total_fragments": 1752, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomadura nitritigenes", "strain": "strain=L46", "accession": "GCA_017573545.1", "taxid": 134602, "species_taxid": 134602, "relation_to_type": "type", "validated": true, "ani": 74.9257, "matched_fragments": 189, "total_fragments": 1752, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomadura violacea", "strain": "strain=LCR2-06", "accession": "GCA_017573465.1", "taxid": 2819934, "species_taxid": 2819934, "relation_to_type": 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"matched_fragments": 56, "total_fragments": 1752, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardia higoensis", "strain": "strain=NBRC 100133", "accession": "GCA_000308595.1", "taxid": 228599, "species_taxid": 228599, "relation_to_type": "type", "validated": true, "ani": 74.8515, "matched_fragments": 104, "total_fragments": 1752, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Caballeronia insecticola", "strain": "strain=RPE64", "accession": "GCA_000402035.1", "taxid": 758793, "species_taxid": 758793, "relation_to_type": "type", "validated": true, "ani": 74.85, "matched_fragments": 83, "total_fragments": 1752, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardia bhagyanarayanae", "strain": "strain=DSM 103495", "accession": "GCA_006716565.1", "taxid": 1215925, "species_taxid": 1215925, "relation_to_type": "type", "validated": true, "ani": 74.8491, "matched_fragments": 114, "total_fragments": 1752, 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