{ "type": "genome", "identifier": "GCA_947473045.1", "organism": "Myxococcales bacterium", "title": "Myxococcales bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO", "publication": [ {} ], "properties": { "assembly_accession": "GCA_947473045.1", "bioproject": "PRJEB35770", "biosample": "SAMEA112175154", "wgs_master": "CANJCO000000000.1", "refseq_category": "na", "taxid": "2026763", "species_taxid": "2026763", "organism_name": "Myxococcales bacterium", "infraspecific_name": "", "isolate": "RH-23may17-1049", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/12/04", "asm_name": "RH-23may17-1049", "submitter": "BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/947/473/045/GCA_947473045.1_RH-23may17-1049", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-12-04", "dateModified": "2022-12-04", "datePublished": "2022-12-04", "_annotation": { "sample_count": 1, "sample_organism": [ "Myxococcales bacterium" ], "sample_taxid": [ "2026763" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Czech Republic" ], "sample_host_location_id": [], "data_size": "1.417 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "5150796", "Number of Sequences": "138", "Longest Sequences (bp)": "257723", "N50 (bp)": "65273", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "67.4", "Number of CDSs": "4286", "Average Protein Length": "365.4", "Coding Ratio (%)": "91.2", "Number of rRNAs": "0", "Number of tRNAs": "50", "Number of CRISPRs": "1" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Labilithrix luteola", "strain": "strain=DSM 27648", "accession": "GCA_001263205.1", "taxid": 1391654, "species_taxid": 1391654, "relation_to_type": "type", "validated": true, "ani": 76.2616, "matched_fragments": 410, "total_fragments": 1650, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Polyangium aurulentum", "strain": "strain=SDU3-1", "accession": "GCA_005144635.2", "taxid": 2567896, "species_taxid": 2567896, "relation_to_type": "type", "validated": true, "ani": 75.4729, "matched_fragments": 403, "total_fragments": 1650, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Polyangium spumosum", "strain": "strain=DSM 14734", "accession": "GCA_009649845.1", "taxid": 889282, "species_taxid": 889282, "relation_to_type": "type", "validated": true, "ani": 75.3787, "matched_fragments": 348, "total_fragments": 1650, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Polyangium fumosum", "strain": "strain=DSM 14668", "accession": "GCA_005144585.1", "taxid": 889272, "species_taxid": 889272, "relation_to_type": "neotype", "validated": true, "ani": 75.3682, "matched_fragments": 360, "total_fragments": 1650, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chondromyces crocatus", "strain": "strain=Cm c5", "accession": "GCA_001189295.1", "taxid": 52, "species_taxid": 52, "relation_to_type": "type", "validated": true, "ani": 75.32, "matched_fragments": 213, "total_fragments": 1650, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Luteibacter yeojuensis", "strain": "strain=DSM 17673", "accession": "GCA_011742875.1", "taxid": 345309, "species_taxid": 345309, "relation_to_type": "type", "validated": true, "ani": 75.1262, "matched_fragments": 63, "total_fragments": 1650, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tistlia consotensis", "strain": "strain=USBA 355", "accession": "GCA_900177295.1", "taxid": 1321365, "species_taxid": 1321365, "relation_to_type": "type", "validated": true, "ani": 74.8908, "matched_fragments": 156, "total_fragments": 1650, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tistlia consotensis", "strain": "strain=DSM 21585", "accession": "GCA_900188055.1", "taxid": 1321365, "species_taxid": 1321365, "relation_to_type": "type", "validated": true, "ani": 74.886, "matched_fragments": 157, "total_fragments": 1650, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium kyungheense", "strain": "strain=DSM 105492", "accession": "GCA_006783905.1", "taxid": 1263636, "species_taxid": 1263636, "relation_to_type": "type", "validated": true, "ani": 74.8792, "matched_fragments": 100, "total_fragments": 1650, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomadura pelletieri", "strain": "strain=DSM 43383", "accession": "GCA_003634705.1", "taxid": 111805, "species_taxid": 111805, "relation_to_type": "type", "validated": true, "ani": 74.8777, "matched_fragments": 98, "total_fragments": 1650, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Clavibacter phaseoli", "strain": "strain=LPPA 982", "accession": "GCA_021922925.1", "taxid": 1734031, "species_taxid": 1734031, "relation_to_type": "type", "validated": true, "ani": 74.8172, "matched_fragments": 126, "total_fragments": 1650, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arenimonas terrae", "strain": "strain=R29", "accession": "GCA_006265115.1", "taxid": 2546226, "species_taxid": 2546226, "relation_to_type": "type", "validated": true, "ani": 74.8112, "matched_fragments": 83, "total_fragments": 1650, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Herbidospora sakaeratensis", "strain": "strain=NBRC 102641", "accession": "GCA_001570525.1", "taxid": 564415, "species_taxid": 564415, "relation_to_type": "type", "validated": true, "ani": 74.7847, "matched_fragments": 125, "total_fragments": 1650, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces olivoverticillatus", "strain": "strain=CECT 3266", "accession": "GCA_014203555.1", "taxid": 66427, "species_taxid": 66427, "relation_to_type": "type", "validated": true, "ani": 74.7822, "matched_fragments": 80, "total_fragments": 1650, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomadura spongiicola", "strain": "strain=LHW52907", "accession": "GCA_003432485.1", "taxid": 2303421, "species_taxid": 2303421, "relation_to_type": "type", "validated": true, "ani": 74.7631, "matched_fragments": 97, "total_fragments": 1650, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomycetospora soli", "strain": "strain=SF1", "accession": "GCA_021026295.1", "taxid": 2893887, "species_taxid": 2893887, "relation_to_type": "type", "validated": true, "ani": 74.7584, "matched_fragments": 151, "total_fragments": 1650, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agrococcus pavilionensis", "strain": "strain=RW1", "accession": "GCA_000400485.1", "taxid": 1346502, "species_taxid": 1346502, "relation_to_type": "type", "validated": true, "ani": 74.7545, "matched_fragments": 136, "total_fragments": 1650, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoclavibacter chungangensis", "strain": "strain=DSM 23821", "accession": "GCA_013410545.1", "taxid": 587635, "species_taxid": 587635, "relation_to_type": "type", "validated": true, "ani": 74.7524, "matched_fragments": 99, "total_fragments": 1650, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoclavibacter chungangensis", "strain": "strain=DSM 23821", "accession": "GCA_008831135.1", "taxid": 587635, "species_taxid": 587635, "relation_to_type": "type", "validated": true, "ani": 74.7508, "matched_fragments": 100, "total_fragments": 1650, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Fulvimonas soli", "strain": "strain=DSM 14263", "accession": "GCA_003148905.1", "taxid": 155197, "species_taxid": 155197, "relation_to_type": "type", "validated": true, "ani": 74.743, "matched_fragments": 102, "total_fragments": 1650, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Fulvimonas soli", "strain": "strain=LMG 19981", "accession": "GCA_006352285.1", "taxid": 155197, "species_taxid": 155197, "relation_to_type": "type", "validated": true, "ani": 74.7406, "matched_fragments": 103, "total_fragments": 1650, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agrococcus jenensis", "strain": "strain=DSM 9580", "accession": "GCA_003752465.1", "taxid": 46353, "species_taxid": 46353, "relation_to_type": "type", "validated": true, "ani": 74.707, "matched_fragments": 134, "total_fragments": 1650, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Clavibacter michiganensis subsp. tessellarius", "strain": "strain=ATCC 33566", "accession": "GCA_002240635.1", "taxid": 31965, "species_taxid": 28447, "relation_to_type": "type", "validated": true, "ani": 74.7045, "matched_fragments": 125, "total_fragments": 1650, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium helvum", "strain": "strain=NEAU-LLC", "accession": "GCA_014779795.1", "taxid": 2773713, "species_taxid": 2773713, "relation_to_type": "type", "validated": true, "ani": 74.7014, "matched_fragments": 114, "total_fragments": 1650, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium flavescens", "strain": "strain=JCM 3877", "accession": "GCA_018588945.1", "taxid": 69366, "species_taxid": 69366, "relation_to_type": "type", "validated": true, "ani": 74.6904, "matched_fragments": 78, "total_fragments": 1650, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces stelliscabiei", "strain": "strain=DSM 41803", "accession": "GCA_014873495.1", "taxid": 146820, "species_taxid": 146820, "relation_to_type": "type", "validated": true, "ani": 74.6494, "matched_fragments": 111, "total_fragments": 1650, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces fulvorobeus", "strain": "strain=DSM 41455", "accession": "GCA_013409565.1", "taxid": 284028, "species_taxid": 284028, "relation_to_type": "type", "validated": true, "ani": 74.6046, "matched_fragments": 62, "total_fragments": 1650, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces fulvorobeus", "strain": "strain=NBRC 15897", "accession": "GCA_013167895.1", "taxid": 284028, "species_taxid": 284028, "relation_to_type": "type", "validated": true, "ani": 74.6046, "matched_fragments": 62, "total_fragments": 1650, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_016703425.1", "gtdb_species": "s__JADJCA01 sp016703425", "ani": 76.4239, "matched_fragments": 320, "total_fragments": 1650, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__JADJCA01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016712525.1", "gtdb_species": "s__JAAFHV01 sp016712525", "ani": 76.3218, "matched_fragments": 398, "total_fragments": 1650, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__JAAFHV01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001263205.1", "gtdb_species": "s__Labilithrix luteola", "ani": 76.2814, "matched_fragments": 405, "total_fragments": 1650, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__Labilithrix", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_001899635.1", "gtdb_species": "s__Labilithrix sp001899635", "ani": 76.1665, "matched_fragments": 457, "total_fragments": 1650, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__Labilithrix", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_903893335.1", "gtdb_species": "s__CAITLX01 sp903893335", "ani": 76.1591, "matched_fragments": 310, "total_fragments": 1650, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__CAITLX01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016720545.1", "gtdb_species": "s__JAAFHV01 sp016720545", "ani": 76.1271, "matched_fragments": 396, "total_fragments": 1650, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__JAAFHV01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.45", "min_intra_species_ani": "99.45", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.94", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_003151595.1", "gtdb_species": "s__PALSA-1152 sp003151595", "ani": 76.0953, "matched_fragments": 370, "total_fragments": 1650, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__PALSA-1152", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_003153495.1", "gtdb_species": "s__Palsa-1150 sp003153495", "ani": 76.013, "matched_fragments": 210, "total_fragments": 1650, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__Palsa-1150", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_003139415.1", "gtdb_species": "s__Palsa-1150 sp003139415", "ani": 75.9866, "matched_fragments": 215, "total_fragments": 1650, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__Palsa-1150", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_013297655.1", "gtdb_species": "s__JAAFHV01 sp013297655", "ani": 75.8784, "matched_fragments": 357, "total_fragments": 1650, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__JAAFHV01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_903906315.1", "gtdb_species": "s__CAIVJW01 sp903906315", "ani": 75.7924, "matched_fragments": 386, "total_fragments": 1650, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__CAIVJW01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_005777185.1", "gtdb_species": "s__SXNL01 sp005777185", "ani": 75.6321, "matched_fragments": 296, "total_fragments": 1650, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__SXNL01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.91", "min_intra_species_ani": "99.91", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.95", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCA_013298325.1", "gtdb_species": "s__JAAFHJ01 sp013298325", "ani": 75.5923, "matched_fragments": 113, "total_fragments": 1650, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__JAAFHJ01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001931535.1", "gtdb_species": "s__Minicystis rosea", "ani": 75.4929, "matched_fragments": 440, "total_fragments": 1650, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__Minicystis", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_005144635.1", "gtdb_species": "s__Polyangium sp005144635", "ani": 75.4639, "matched_fragments": 404, "total_fragments": 1650, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__Polyangium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_017881185.1", "gtdb_species": "s__JADGRF01 sp017881185", "ani": 75.451, "matched_fragments": 117, "total_fragments": 1650, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__JAFGIB01;g__JADGRF01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016704445.1", "gtdb_species": "s__SCUS01 sp016704445", "ani": 75.2828, "matched_fragments": 241, "total_fragments": 1650, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Ga0077539;g__SCUS01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.47", "min_intra_species_ani": "98.28", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.89", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCA_016212965.1", "gtdb_species": "s__JACRDA01 sp016212965", "ani": 75.2251, "matched_fragments": 361, "total_fragments": 1650, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__JACRDA01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_004297725.1", "gtdb_species": "s__SCUS01 sp004297725", "ani": 75.1853, "matched_fragments": 257, "total_fragments": 1650, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Ga0077539;g__SCUS01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016879935.1", "gtdb_species": "s__JAEUJQ01 sp016879935", "ani": 75.0746, "matched_fragments": 218, "total_fragments": 1650, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Myxococcia;o__Myxococcales;f__Myxococcaceae;g__JAEUJQ01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003432485.1", "gtdb_species": "s__Spirillospora sp003432485", "ani": 74.76, "matched_fragments": 98, "total_fragments": 1650, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptosporangiales;f__Streptosporangiaceae;g__Spirillospora", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_006715355.1", "gtdb_species": "s__Agromyces sp006715355", "ani": 74.6702, "matched_fragments": 122, "total_fragments": 1650, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": -0.126, "cell_length": 0.61, "doubling_h": 0.801, "growth_tmp": 28.761, "optimum_tmp": 29.364, "optimum_ph": 7.8, "genome_size": 9965390.721, "gc_content": 69.329, "coding_genes": 8198.189, "rRNA16S_genes": 3.222, "tRNA_genes": 63.782, "gram_stain": 0.0, "sporulation": 0.928, "motility": 0.941, "range_salinity": 0.75, "facultative_respiration": 0.0, "anaerobic_respiration": 0.0, "aerobic_respiration": 1.0, "mesophilic_range_tmp": 1.0, "thermophilic_range_tmp": 0.0, "psychrophilic_range_tmp": 0.0, "bacillus_cell_shape": 1.0, "coccus_cell_shape": 0.0, "filament_cell_shape": 0.0, "coccobacillus_cell_shape": 0.0, "vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.0 }, "_gtdb_taxon": [ "d__Bacteria", "p__Myxococcota", "c__Polyangia", "o__Polyangiales", "f__Polyangiaceae", "g__JANYHY01", "s__JANYHY01 sp947473045" ], "_genome_taxon": [ "Myxococcales", "bacterium", "d__Bacteria", "p__Myxococcota", "c__Polyangia", "o__Polyangiales", "f__Polyangiaceae", "g__JANYHY01", "s__JANYHY01 sp947473045", "Bacteria", "Myxococcota", "Polyangia", "Polyangiales", "Polyangiaceae", "JANYHY01", "JANYHY01", "sp947473045" ], "_meo": [ { "id": "MEO_0000038", "label": "freshwater" }, { "id": "MEO_0000024", "label": "lake" } ], "quality": 3, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }