{ "type": "genome", "identifier": "GCA_947481545.1", "organism": "Acetobacteraceae bacterium", "title": "Acetobacteraceae bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO", "publication": [ {} ], "properties": { "assembly_accession": "GCA_947481545.1", "bioproject": "PRJEB35770", "biosample": "SAMEA112175827", "wgs_master": "CANKGZ000000000.1", "refseq_category": "na", "taxid": "1909293", "species_taxid": "1909293", "organism_name": "Acetobacteraceae bacterium", "infraspecific_name": "", "isolate": "RH-27jun17-349", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/12/04", "asm_name": "RH-27jun17-349", "submitter": "BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/947/481/545/GCA_947481545.1_RH-27jun17-349", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-12-04", "dateModified": "2022-12-04", "datePublished": "2022-12-04", "_annotation": { "sample_count": 1, "sample_organism": [ "Acetobacteraceae bacterium" ], "sample_taxid": [ "1909293" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Czech Republic" ], "sample_host_location_id": [], "data_size": "1.463 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 91.67, "contamination": 13.89, "strain_heterogeneity": 25.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", 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"status": "below_threshold" }, { "organism_name": "Rhodovastum atsumiense", "strain": "strain=G2-11", "accession": "GCA_937425535.1", "taxid": 504468, "species_taxid": 504468, "relation_to_type": "type", "validated": true, "ani": 76.5389, "matched_fragments": 297, "total_fragments": 1521, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acidiphilium multivorum", "strain": "strain=AIU301", "accession": "GCA_000964345.1", "taxid": 62140, "species_taxid": 62140, "relation_to_type": "type", "validated": true, "ani": 76.5022, "matched_fragments": 164, "total_fragments": 1521, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acidisoma cellulosilyticum", "strain": "strain=HW T5.17", "accession": "GCA_020621385.1", "taxid": 2802395, "species_taxid": 2802395, "relation_to_type": "type", "validated": true, "ani": 76.3916, "matched_fragments": 131, "total_fragments": 1521, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseomonas cervicalis", "strain": "strain=ATCC 49957", "accession": "GCA_000164635.1", "taxid": 204525, "species_taxid": 204525, "relation_to_type": "type", "validated": true, "ani": 76.3559, "matched_fragments": 199, "total_fragments": 1521, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Endobacter medicaginis", "strain": "strain=LMG 26838", "accession": "GCA_013376135.1", "taxid": 1181271, "species_taxid": 1181271, "relation_to_type": "type", "validated": true, "ani": 76.3516, "matched_fragments": 90, "total_fragments": 1521, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseomonas coralli", "strain": "strain=M0104", "accession": "GCA_009829925.1", "taxid": 2545983, "species_taxid": 2545983, "relation_to_type": "type", "validated": true, "ani": 76.321, "matched_fragments": 189, "total_fragments": 1521, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acidiphilium multivorum", "strain": "strain=AIU301", "accession": "GCA_000202835.1", "taxid": 62140, "species_taxid": 62140, "relation_to_type": "type", "validated": true, "ani": 76.3181, "matched_fragments": 192, "total_fragments": 1521, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acidisoma silvae", "strain": "strain=HW T2.11", "accession": "GCA_020618775.1", "taxid": 2802396, "species_taxid": 2802396, "relation_to_type": "type", "validated": true, "ani": 76.2488, "matched_fragments": 148, "total_fragments": 1521, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseomonas deserti", "strain": "strain=M3", "accession": "GCA_001982615.1", "taxid": 1817963, "species_taxid": 1817963, "relation_to_type": "type", "validated": true, "ani": 76.2319, "matched_fragments": 235, "total_fragments": 1521, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gluconacetobacter liquefaciens", "strain": "strain=LMG 1382", "accession": "GCA_014174285.1", "taxid": 89584, "species_taxid": 89584, "relation_to_type": "type", "validated": true, "ani": 76.1839, "matched_fragments": 114, "total_fragments": 1521, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Endobacter medicaginis", "strain": "strain=CECT 8088", "accession": "GCA_014192375.1", "taxid": 1181271, "species_taxid": 1181271, "relation_to_type": "type", "validated": true, "ani": 76.1837, "matched_fragments": 137, "total_fragments": 1521, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseomonas arctica", "strain": "strain=LMG 28251", "accession": "GCA_018128965.1", "taxid": 1509237, "species_taxid": 1509237, "relation_to_type": "type", "validated": true, "ani": 75.9009, "matched_fragments": 173, "total_fragments": 1521, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bradyrhizobium sediminis", "strain": "strain=S2-20-1", "accession": "GCA_018736085.1", "taxid": 2840469, "species_taxid": 2840469, "relation_to_type": "type", "validated": true, "ani": 75.8503, "matched_fragments": 118, "total_fragments": 1521, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Magnetospirillum moscoviense", "strain": "strain=BB-1", "accession": "GCA_001650635.1", "taxid": 1437059, "species_taxid": 1437059, "relation_to_type": "type", "validated": true, "ani": 75.8156, "matched_fragments": 106, "total_fragments": 1521, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nisaea acidiphila", "strain": "strain=MEBiC11861", "accession": "GCA_024662015.1", "taxid": 1862145, "species_taxid": 1862145, "relation_to_type": "type", "validated": true, "ani": 75.8082, "matched_fragments": 79, "total_fragments": 1521, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acetobacter nitrogenifigens", "strain": "strain=DSM 23921", "accession": "GCA_000429165.1", "taxid": 285268, "species_taxid": 285268, "relation_to_type": "type", "validated": true, "ani": 75.7987, "matched_fragments": 82, "total_fragments": 1521, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhizobium multihospitium", "strain": "strain=HAMBI 2975", "accession": "GCA_900094585.1", "taxid": 410764, "species_taxid": 410764, "relation_to_type": "type", "validated": true, "ani": 75.5526, "matched_fragments": 69, "total_fragments": 1521, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bradyrhizobium ivorense", "strain": "strain=CI-1B", "accession": "GCA_900696085.2", "taxid": 2511166, "species_taxid": 2511166, "relation_to_type": "type", "validated": true, "ani": 75.5257, "matched_fragments": 168, "total_fragments": 1521, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aestuariivirga litoralis", "strain": "strain=KCTC 52945", "accession": "GCA_003234965.1", "taxid": 2650924, "species_taxid": 2650924, "relation_to_type": "type", "validated": true, "ani": 75.5005, "matched_fragments": 81, "total_fragments": 1521, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phenylobacterium glaciei", "strain": "strain=20VBR1", "accession": "GCA_016772415.2", "taxid": 2803784, "species_taxid": 2803784, "relation_to_type": "type", "validated": true, "ani": 75.4616, "matched_fragments": 78, "total_fragments": 1521, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodobacter viridis", "strain": "strain=JA737", "accession": "GCA_003217355.1", "taxid": 1054202, "species_taxid": 1054202, "relation_to_type": "type", "validated": true, "ani": 75.2934, "matched_fragments": 82, "total_fragments": 1521, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paracoccus binzhouensis", "strain": "strain=wg1", "accession": "GCA_016446475.1", "taxid": 2796149, "species_taxid": 2796149, "relation_to_type": "type", "validated": true, "ani": 75.2158, "matched_fragments": 117, "total_fragments": 1521, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas 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