{
    "type": "genome",
    "identifier": "GCA_947484455.1",
    "organism": "Hyphomonadaceae bacterium",
    "title": "Hyphomonadaceae bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_947484455.1",
        "bioproject": "PRJEB35770",
        "biosample": "SAMEA112176178",
        "wgs_master": "CANKPI000000000.1",
        "refseq_category": "na",
        "taxid": "2026748",
        "species_taxid": "2026748",
        "organism_name": "Hyphomonadaceae bacterium",
        "infraspecific_name": "",
        "isolate": "TH-Jun18-202",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/12/04",
        "asm_name": "TH-Jun18-202",
        "submitter": "BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/947/484/455/GCA_947484455.1_TH-Jun18-202",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-12-04",
    "dateModified": "2022-12-04",
    "datePublished": "2022-12-04",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Hyphomonadaceae bacterium"
        ],
        "sample_taxid": [
            "2026748"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Switzerland"
        ],
        "sample_host_location_id": [],
        "data_size": "0.586 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 16.67,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2088790",
        "Number of Sequences": "403",
        "Longest Sequences (bp)": "23676",
        "N50 (bp)": "5217",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "64.7",
        "Number of CDSs": "1777",
        "Average Protein Length": "270.4",
        "Coding Ratio (%)": "69.0",
        "Number of rRNAs": "0",
        "Number of tRNAs": "19",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Brevundimonas alba",
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                "taxid": 74314,
                "species_taxid": 74314,
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                "status": "below_threshold"
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            {
                "organism_name": "Bradyrhizobium campsiandrae",
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                "relation_to_type": "type",
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                "ani": 76.4225,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Hyphomonas johnsonii",
                "strain": "strain=MHS-2",
                "accession": "GCA_000685275.1",
                "taxid": 81031,
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                "relation_to_type": "type",
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                "ani": 76.262,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Bradyrhizobium hipponense",
                "strain": "strain=aSej3",
                "accession": "GCA_008123965.1",
                "taxid": 2605638,
                "species_taxid": 2605638,
                "relation_to_type": "type",
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                "matched_fragments": 61,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Methylorubrum zatmanii",
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                "accession": "GCA_014845115.1",
                "taxid": 29429,
                "species_taxid": 29429,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.1914,
                "matched_fragments": 60,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Hyphomonas sediminis",
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                "accession": "GCA_019679475.1",
                "taxid": 2866160,
                "species_taxid": 2866160,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.1821,
                "matched_fragments": 63,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bradyrhizobium ottawaense",
                "strain": "strain=OO99",
                "accession": "GCA_002278135.2",
                "taxid": 931866,
                "species_taxid": 931866,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.1339,
                "matched_fragments": 81,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bosea thiooxidans",
                "strain": "strain=DSM 9653",
                "accession": "GCA_900168195.1",
                "taxid": 53254,
                "species_taxid": 53254,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.1222,
                "matched_fragments": 66,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Chelatococcus caeni",
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                "accession": "GCA_014196925.1",
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                "species_taxid": 1348468,
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                "matched_fragments": 55,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Bosea lathyri",
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                "ani": 76.0488,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bosea vaviloviae",
                "strain": "strain=Vaf18",
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                "ani": 76.0089,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Methylobacterium nonmethylotrophicum",
                "strain": "strain=6HR-1",
                "accession": "GCA_004745635.1",
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                "species_taxid": 1141884,
                "relation_to_type": "type",
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                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 0.0,
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        "gtdb_result": [
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                "accession": "GCA_903831485.1",
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                "mean_intra_species_ani": "N/A",
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        ]
    },
    "_bac2feature": {
        "phenotypes": null,
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        "Hyphomonadaceae",
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    "_meo": [
        {
            "id": "MEO_0000038",
            "label": "freshwater"
        },
        {
            "id": "MEO_0000024",
            "label": "lake"
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    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}