{ "type": "genome", "identifier": "GCA_947488065.1", "organism": "Verrucomicrobiota bacterium", "title": "Verrucomicrobiota bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO", "publication": [ {} ], "properties": { "assembly_accession": "GCA_947488065.1", "bioproject": "PRJEB35770", "biosample": "SAMEA112176018", "wgs_master": "CANLCP000000000.1", "refseq_category": "na", "taxid": "2026799", "species_taxid": "2026799", "organism_name": "Verrucomicrobiota bacterium", "infraspecific_name": "", "isolate": "RH-9nov16-394", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/12/04", "asm_name": "RH-9nov16-394", "submitter": "BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/947/488/065/GCA_947488065.1_RH-9nov16-394", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-12-04", "dateModified": "2022-12-04", "datePublished": "2022-12-04", "_annotation": { "sample_count": 1, "sample_organism": [ "Verrucomicrobiota bacterium" ], "sample_taxid": [ "2026799" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Czech Republic" ], "sample_host_location_id": [], "data_size": "0.920 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 66.95, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "3333184", "Number of Sequences": "523", "Longest Sequences (bp)": "41317", "N50 (bp)": "6909", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "67.6", "Number of CDSs": "2152", "Average Protein Length": "356.4", "Coding Ratio (%)": "69.0", "Number of rRNAs": "0", "Number of tRNAs": "28", "Number of CRISPRs": "1" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Chthoniobacter flavus", "strain": "strain=Ellin428", "accession": "GCA_000173075.1", "taxid": 191863, "species_taxid": 191863, "relation_to_type": "type", "validated": true, "ani": 75.4223, "matched_fragments": 62, "total_fragments": 895, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chthoniobacter flavus", "strain": "strain=DSM 22515", "accession": "GCA_004341915.1", "taxid": 191863, "species_taxid": 191863, "relation_to_type": "type", "validated": true, "ani": 75.4066, "matched_fragments": 63, "total_fragments": 895, "ani_threshold": 95, "status": 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