{
    "type": "genome",
    "identifier": "GCA_947488455.1",
    "organism": "Acidimicrobiaceae bacterium",
    "title": "Acidimicrobiaceae bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_947488455.1",
        "bioproject": "PRJEB35770",
        "biosample": "SAMEA112176249",
        "wgs_master": "CANLAX000000000.1",
        "refseq_category": "na",
        "taxid": "2024894",
        "species_taxid": "2024894",
        "organism_name": "Acidimicrobiaceae bacterium",
        "infraspecific_name": "",
        "isolate": "TH-Jun18-89",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/12/04",
        "asm_name": "TH-Jun18-89",
        "submitter": "BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/947/488/455/GCA_947488455.1_TH-Jun18-89",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-12-04",
    "dateModified": "2022-12-04",
    "datePublished": "2022-12-04",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Acidimicrobiaceae bacterium"
        ],
        "sample_taxid": [
            "2024894"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Switzerland"
        ],
        "sample_host_location_id": [],
        "data_size": "0.337 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 48.44,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1180857",
        "Number of Sequences": "158",
        "Longest Sequences (bp)": "46046",
        "N50 (bp)": "8882",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "51.5",
        "Number of CDSs": "1059",
        "Average Protein Length": "303.9",
        "Coding Ratio (%)": "81.8",
        "Number of rRNAs": "0",
        "Number of tRNAs": "18",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 48.44,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
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                "accession": "GCA_005805045.1",
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                "total_fragments": 326,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__Ilumatobacteraceae;g__BACL27",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.25",
                "min_intra_species_ani": "99.23",
                "mean_intra_species_af": "0.81",
                "min_intra_species_af": "0.81",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_002737635.1",
                "gtdb_species": "s__BACL27 sp002737635",
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                "total_fragments": 326,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__Ilumatobacteraceae;g__BACL27",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_014190055.1",
                "gtdb_species": "s__BACL27 sp014190055",
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                "matched_fragments": 131,
                "total_fragments": 326,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__Ilumatobacteraceae;g__BACL27",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.53",
                "min_intra_species_ani": "95.36",
                "mean_intra_species_af": "0.86",
                "min_intra_species_af": "0.77",
                "num_clustered_genomes": 8,
                "status": "-"
            },
            {
                "accession": "GCA_009923685.1",
                "gtdb_species": "s__BACL27 sp009923685",
                "ani": 79.6928,
                "matched_fragments": 56,
                "total_fragments": 326,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__Ilumatobacteraceae;g__BACL27",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_009927565.1",
                "gtdb_species": "s__BACL27 sp009927565",
                "ani": 79.199,
                "matched_fragments": 125,
                "total_fragments": 326,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__Ilumatobacteraceae;g__BACL27",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016462185.1",
                "gtdb_species": "s__BACL27 sp016462185",
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                "matched_fragments": 145,
                "total_fragments": 326,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__Ilumatobacteraceae;g__BACL27",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.92",
                "min_intra_species_ani": "98.92",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.88",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_003569125.1",
                "gtdb_species": "s__BACL27 sp003569125",
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                "matched_fragments": 118,
                "total_fragments": 326,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__Ilumatobacteraceae;g__BACL27",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_014190295.1",
                "gtdb_species": "s__BACL27 sp014190295",
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                "total_fragments": 326,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__Ilumatobacteraceae;g__BACL27",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_009703975.1",
                "gtdb_species": "s__BACL27 sp009703975",
                "ani": 78.4433,
                "matched_fragments": 87,
                "total_fragments": 326,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__Ilumatobacteraceae;g__BACL27",
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                "mean_intra_species_ani": "97.18",
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                "mean_intra_species_af": "0.73",
                "min_intra_species_af": "0.69",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_016463105.1",
                "gtdb_species": "s__BACL27 sp016463105",
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                "matched_fragments": 104,
                "total_fragments": 326,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__Ilumatobacteraceae;g__BACL27",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016870935.1",
                "gtdb_species": "s__BACL27 sp016870935",
                "ani": 77.8344,
                "matched_fragments": 113,
                "total_fragments": 326,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__Ilumatobacteraceae;g__BACL27",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.302,
        "cell_length": 0.343,
        "doubling_h": null,
        "growth_tmp": 37.25,
        "optimum_tmp": 39.0,
        "optimum_ph": 1.9,
        "genome_size": 2693748.75,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": 0.25,
        "sporulation": 0.0,
        "motility": 0.5,
        "range_salinity": null,
        "facultative_respiration": 0.333,
        "anaerobic_respiration": 0.0,
        "aerobic_respiration": 0.666,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Actinomycetota",
        "c__Acidimicrobiia",
        "o__Acidimicrobiales",
        "f__Ilumatobacteraceae",
        "g__BACL27",
        "s__BACL27 sp945893395"
    ],
    "_genome_taxon": [
        "Acidimicrobiaceae",
        "bacterium",
        "d__Bacteria",
        "p__Actinomycetota",
        "c__Acidimicrobiia",
        "o__Acidimicrobiales",
        "f__Ilumatobacteraceae",
        "g__BACL27",
        "s__BACL27 sp945893395",
        "Bacteria",
        "Actinomycetota",
        "Acidimicrobiia",
        "Acidimicrobiales",
        "Ilumatobacteraceae",
        "BACL27",
        "BACL27",
        "sp945893395"
    ],
    "_meo": [
        {
            "id": "MEO_0000038",
            "label": "freshwater"
        },
        {
            "id": "MEO_0000024",
            "label": "lake"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}