{
    "type": "genome",
    "identifier": "GCA_947500905.1",
    "organism": "Microbacteriaceae bacterium",
    "title": "Microbacteriaceae bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "University of Zurich",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_947500905.1",
        "bioproject": "PRJNA428721",
        "biosample": "SAMEA112176501",
        "wgs_master": "CANMTZ000000000.1",
        "refseq_category": "na",
        "taxid": "1873462",
        "species_taxid": "1873462",
        "organism_name": "Microbacteriaceae bacterium",
        "infraspecific_name": "",
        "isolate": "ZE-3nov15-126",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/12/04",
        "asm_name": "ZE-3nov15-126",
        "submitter": "University of Zurich",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/947/500/905/GCA_947500905.1_ZE-3nov15-126",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-12-04",
    "dateModified": "2022-12-04",
    "datePublished": "2022-12-04",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Microbacteriaceae bacterium"
        ],
        "sample_taxid": [
            "1873462"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Switzerland"
        ],
        "sample_host_location_id": [],
        "data_size": "0.259 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 66.67,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "904790",
        "Number of Sequences": "95",
        "Longest Sequences (bp)": "62910",
        "N50 (bp)": "12970",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "53.8",
        "Number of CDSs": "782",
        "Average Protein Length": "317.3",
        "Coding Ratio (%)": "82.3",
        "Number of rRNAs": "1",
        "Number of tRNAs": "27",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 66.67,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_903831585.1",
                "gtdb_species": "s__Rhodoluna sp903831585",
                "ani": 94.8155,
                "matched_fragments": 164,
                "total_fragments": 261,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Rhodoluna",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_009702455.1",
                "gtdb_species": "s__Rhodoluna sp009702455",
                "ani": 82.9052,
                "matched_fragments": 188,
                "total_fragments": 261,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Rhodoluna",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.81",
                "min_intra_species_ani": "95.81",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.88",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_017983965.1",
                "gtdb_species": "s__Rhodoluna sp017983965",
                "ani": 80.9989,
                "matched_fragments": 118,
                "total_fragments": 261,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Rhodoluna",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.54",
                "min_intra_species_ani": "99.54",
                "mean_intra_species_af": "0.80",
                "min_intra_species_af": "0.80",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_903893675.1",
                "gtdb_species": "s__Rhodoluna sp903893675",
                "ani": 78.5395,
                "matched_fragments": 74,
                "total_fragments": 261,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Rhodoluna",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_903909605.1",
                "gtdb_species": "s__Rhodoluna sp903909605",
                "ani": 78.0059,
                "matched_fragments": 85,
                "total_fragments": 261,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Rhodoluna",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.84",
                "min_intra_species_ani": "99.84",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.93",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_903880095.1",
                "gtdb_species": "s__Rhodoluna sp903880095",
                "ani": 76.9511,
                "matched_fragments": 56,
                "total_fragments": 261,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Rhodoluna",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_009703445.1",
                "gtdb_species": "s__Rhodoluna sp009703445",
                "ani": 76.9231,
                "matched_fragments": 50,
                "total_fragments": 261,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Rhodoluna",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_903820955.1",
                "gtdb_species": "s__Rhodoluna sp903820955",
                "ani": 76.789,
                "matched_fragments": 51,
                "total_fragments": 261,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Rhodoluna",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.52",
                "min_intra_species_ani": "98.11",
                "mean_intra_species_af": "0.83",
                "min_intra_species_af": "0.79",
                "num_clustered_genomes": 6,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.394,
        "cell_length": 0.01,
        "doubling_h": 0.667,
        "growth_tmp": 27.726,
        "optimum_tmp": 27.345,
        "optimum_ph": 7.263,
        "genome_size": 3377974.942,
        "gc_content": 67.665,
        "coding_genes": 2863.624,
        "rRNA16S_genes": 1.882,
        "tRNA_genes": 48.931,
        "gram_stain": 0.994,
        "sporulation": 0.037,
        "motility": 0.26,
        "range_salinity": 0.5,
        "facultative_respiration": 0.004,
        "anaerobic_respiration": 0.0,
        "aerobic_respiration": 0.995,
        "mesophilic_range_tmp": 0.96,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.04,
        "bacillus_cell_shape": 0.96,
        "coccus_cell_shape": 0.007,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.015,
        "vibrio_cell_shape": 0.015,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Actinomycetota",
        "c__Actinomycetes",
        "o__Actinomycetales",
        "f__Microbacteriaceae",
        "g__Rhodoluna",
        "s__Rhodoluna sp021741685"
    ],
    "_genome_taxon": [
        "Microbacteriaceae",
        "bacterium",
        "d__Bacteria",
        "p__Actinomycetota",
        "c__Actinomycetes",
        "o__Actinomycetales",
        "f__Microbacteriaceae",
        "g__Rhodoluna",
        "s__Rhodoluna sp021741685",
        "Bacteria",
        "Actinomycetota",
        "Actinomycetes",
        "Actinomycetales",
        "Microbacteriaceae",
        "Rhodoluna",
        "Rhodoluna",
        "sp021741685"
    ],
    "_meo": [
        {
            "id": "MEO_0000038",
            "label": "freshwater"
        },
        {
            "id": "MEO_0000024",
            "label": "lake"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}