{
    "type": "genome",
    "identifier": "GCA_947646335.1",
    "organism": "uncultured Roseburia sp.",
    "title": "uncultured Roseburia sp.",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "EMG",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_947646335.1",
        "bioproject": "PRJEB57835",
        "biosample": "SAMEA112233837",
        "wgs_master": "CANSGF000000000.1",
        "refseq_category": "na",
        "taxid": "512314",
        "species_taxid": "512314",
        "organism_name": "uncultured Roseburia sp.",
        "infraspecific_name": "",
        "isolate": "SRR15730524_bin.78_metawrap_v1.3_MAG",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/12/21",
        "asm_name": "SRR15730524_bin.78_metawrap_v1.3_MAG",
        "submitter": "EMG",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/947/646/335/GCA_947646335.1_SRR15730524_bin.78_metawrap_v1.3_MAG",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-12-21",
    "dateModified": "2022-12-21",
    "datePublished": "2022-12-21",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Roseburia sp."
        ],
        "sample_taxid": [
            "512314"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "not provided"
        ],
        "sample_host_location_id": [],
        "data_size": "0.846 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 4.63,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2976161",
        "Number of Sequences": "100",
        "Longest Sequences (bp)": "208284",
        "N50 (bp)": "48341",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "45.6",
        "Number of CDSs": "2620",
        "Average Protein Length": "338.5",
        "Coding Ratio (%)": "89.4",
        "Number of rRNAs": "0",
        "Number of tRNAs": "26",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Roseburia inulinivorans",
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                "accession": "GCA_000174195.1",
                "taxid": 360807,
                "species_taxid": 360807,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 77.5302,
                "matched_fragments": 74,
                "total_fragments": 941,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseburia hominis",
                "strain": "strain=A2-183",
                "accession": "GCA_000225345.1",
                "taxid": 301301,
                "species_taxid": 301301,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.7332,
                "matched_fragments": 82,
                "total_fragments": 941,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseburia intestinalis",
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                "accession": "GCA_900537995.1",
                "taxid": 166486,
                "species_taxid": 166486,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.7251,
                "matched_fragments": 83,
                "total_fragments": 941,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseburia intestinalis",
                "strain": "strain=L1 82",
                "accession": "GCA_025151715.1",
                "taxid": 166486,
                "species_taxid": 166486,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.7198,
                "matched_fragments": 82,
                "total_fragments": 941,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseburia intestinalis",
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                "accession": "GCA_000156535.1",
                "taxid": 166486,
                "species_taxid": 166486,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.7116,
                "matched_fragments": 81,
                "total_fragments": 941,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Marvinbryantia formatexigens",
                "strain": "strain=DSM 14469",
                "accession": "GCA_025148285.1",
                "taxid": 168384,
                "species_taxid": 168384,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.4078,
                "matched_fragments": 50,
                "total_fragments": 941,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 4.63,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
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                "accession": "GCA_011959925.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__1XD42-69",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.99",
                "min_intra_species_ani": "98.99",
                "mean_intra_species_af": "0.83",
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                "num_clustered_genomes": 2,
                "status": "conclusive"
            },
            {
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                "matched_fragments": 326,
                "total_fragments": 941,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__1XD42-69",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_910585825.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__1XD42-69",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_910586645.1",
                "gtdb_species": "s__1XD42-69 sp910586645",
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                "total_fragments": 941,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__1XD42-69",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_009911505.1",
                "gtdb_species": "s__1XD42-69 sp009911505",
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                "matched_fragments": 204,
                "total_fragments": 941,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__1XD42-69",
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            },
            {
                "accession": "GCA_910588565.1",
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                "mean_intra_species_ani": "N/A",
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            },
            {
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__1XD42-69",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
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            },
            {
                "accession": "GCA_910589105.1",
                "gtdb_species": "s__1XD42-69 sp910589105",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__1XD42-69",
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                "mean_intra_species_ani": "N/A",
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            {
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            {
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            {
                "accession": "GCF_014287635.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__1XD42-69",
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            },
            {
                "accession": "GCA_900548205.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Roseburia",
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                "mean_intra_species_ani": "99.97",
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                "num_clustered_genomes": 2,
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            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.35,
        "cell_length": null,
        "doubling_h": 0.301,
        "growth_tmp": 37.0,
        "optimum_tmp": 37.0,
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        "gc_content": 41.886,
        "coding_genes": 3554.0,
        "rRNA16S_genes": null,
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        "gram_stain": 1.0,
        "sporulation": 0.0,
        "motility": 1.0,
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        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 1.0,
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        "vibrio_cell_shape": 0.0,
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    "_gtdb_taxon": [
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        "p__Bacillota_A",
        "c__Clostridia",
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        "g__Roseburia_B",
        "s__Roseburia_B sp011959925"
    ],
    "_genome_taxon": [
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        "sp.",
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Lachnospirales",
        "f__Lachnospiraceae",
        "g__Roseburia_B",
        "s__Roseburia_B sp011959925",
        "Bacteria",
        "Bacillota",
        "A",
        "Clostridia",
        "Lachnospirales",
        "Lachnospiraceae",
        "Roseburia",
        "B",
        "Roseburia",
        "B",
        "sp011959925"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}