{
    "type": "genome",
    "identifier": "GCA_947652465.1",
    "organism": "uncultured Dorea sp.",
    "title": "uncultured Dorea sp.",
    "description": "derived from environmental source; derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "EMG",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_947652465.1",
        "bioproject": "PRJEB58022",
        "biosample": "SAMEA112250353",
        "wgs_master": "CANTDF000000000.1",
        "refseq_category": "na",
        "taxid": "286138",
        "species_taxid": "286138",
        "organism_name": "uncultured Dorea sp.",
        "infraspecific_name": "",
        "isolate": "SRR18243804_bin.63_metawrap_v1.3_MAG",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/12/21",
        "asm_name": "SRR18243804_bin.63_metawrap_v1.3_MAG",
        "submitter": "EMG",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/947/652/465/GCA_947652465.1_SRR18243804_bin.63_metawrap_v1.3_MAG",
        "excluded_from_refseq": "derived from environmental source; derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-12-21",
    "dateModified": "2022-12-21",
    "datePublished": "2022-12-21",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "uncultured Dorea sp."
        ],
        "sample_taxid": [
            "286138"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Germany"
        ],
        "sample_host_location_id": [],
        "data_size": "0.890 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 65.97,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3092839",
        "Number of Sequences": "205",
        "Longest Sequences (bp)": "110096",
        "N50 (bp)": "20983",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "47.2",
        "Number of CDSs": "2693",
        "Average Protein Length": "328.9",
        "Coding Ratio (%)": "85.9",
        "Number of rRNAs": "0",
        "Number of tRNAs": "21",
        "Number of CRISPRs": "2"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Sporofaciens musculi",
                "strain": "strain=WCA-9-b2",
                "accession": "GCA_009830285.1",
                "taxid": 2681861,
                "species_taxid": 2681861,
                "relation_to_type": "type",
                "validated": true,
                "ani": 81.5274,
                "matched_fragments": 583,
                "total_fragments": 926,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "[Clostridium] scindens",
                "strain": "strain=ATCC 35704",
                "accession": "GCA_000154505.1",
                "taxid": 29347,
                "species_taxid": 29347,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 77.0511,
                "matched_fragments": 144,
                "total_fragments": 926,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "[Clostridium] scindens",
                "strain": "strain=ATCC 35704",
                "accession": "GCA_004295125.1",
                "taxid": 29347,
                "species_taxid": 29347,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 77.0097,
                "matched_fragments": 144,
                "total_fragments": 926,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Merdimonas faecis",
                "strain": "strain=BR31",
                "accession": "GCA_001754075.1",
                "taxid": 1653435,
                "species_taxid": 1653435,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.6925,
                "matched_fragments": 110,
                "total_fragments": 926,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Dorea phocaeensis",
                "strain": "strain=Marseille-P4003",
                "accession": "GCA_900240315.1",
                "taxid": 2040291,
                "species_taxid": 2040291,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.6296,
                "matched_fragments": 98,
                "total_fragments": 926,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Dorea longicatena",
                "strain": "strain=DSM 13814",
                "accession": "GCA_000154065.1",
                "taxid": 88431,
                "species_taxid": 88431,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.3004,
                "matched_fragments": 83,
                "total_fragments": 926,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Massilistercora timonensis",
                "strain": "strain=Marseille-P3756",
                "accession": "GCA_900312975.1",
                "taxid": 2086584,
                "species_taxid": 2086584,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.2848,
                "matched_fragments": 102,
                "total_fragments": 926,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Dorea longicatena",
                "strain": "strain=DSM 13814",
                "accession": "GCA_025150085.1",
                "taxid": 88431,
                "species_taxid": 88431,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.2801,
                "matched_fragments": 88,
                "total_fragments": 926,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Dorea formicigenerans",
                "strain": "strain=ATCC 27755",
                "accession": "GCA_025150245.1",
                "taxid": 39486,
                "species_taxid": 39486,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 76.0628,
                "matched_fragments": 64,
                "total_fragments": 926,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 65.97,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_910574885.1",
                "gtdb_species": "s__Sporofaciens sp910574885",
                "ani": 99.1671,
                "matched_fragments": 864,
                "total_fragments": 926,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Sporofaciens",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.41",
                "min_intra_species_ani": "98.81",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.83",
                "num_clustered_genomes": 5,
                "status": "conclusive"
            },
            {
                "accession": "GCA_910577685.1",
                "gtdb_species": "s__Sporofaciens sp910577685",
                "ani": 82.7995,
                "matched_fragments": 582,
                "total_fragments": 926,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Sporofaciens",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_011960625.1",
                "gtdb_species": "s__Sporofaciens sp011960625",
                "ani": 82.0719,
                "matched_fragments": 309,
                "total_fragments": 926,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Sporofaciens",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_910584575.1",
                "gtdb_species": "s__Sporofaciens sp910584575",
                "ani": 81.967,
                "matched_fragments": 562,
                "total_fragments": 926,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Sporofaciens",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_910587575.1",
                "gtdb_species": "s__Sporofaciens sp910587575",
                "ani": 81.8237,
                "matched_fragments": 525,
                "total_fragments": 926,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Sporofaciens",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_009830285.1",
                "gtdb_species": "s__Sporofaciens musculi",
                "ani": 81.5476,
                "matched_fragments": 581,
                "total_fragments": 926,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Sporofaciens",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.72",
                "min_intra_species_ani": "97.71",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_910579925.1",
                "gtdb_species": "s__Sporofaciens sp910579925",
                "ani": 80.6408,
                "matched_fragments": 501,
                "total_fragments": 926,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Sporofaciens",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_004295125.1",
                "gtdb_species": "s__Clostridium_AP scindens",
                "ani": 77.0097,
                "matched_fragments": 144,
                "total_fragments": 926,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Clostridium_AP",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.44",
                "min_intra_species_ani": "99.12",
                "mean_intra_species_af": "0.90",
                "min_intra_species_af": "0.78",
                "num_clustered_genomes": 13,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.199,
        "cell_length": 0.301,
        "doubling_h": null,
        "growth_tmp": 37.0,
        "optimum_tmp": 37.0,
        "optimum_ph": null,
        "genome_size": 3492665.666,
        "gc_content": 40.912,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": 1.0,
        "sporulation": 0.0,
        "motility": 0.0,
        "range_salinity": 0.0,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Lachnospirales",
        "f__Lachnospiraceae",
        "g__Sporofaciens",
        "s__Sporofaciens sp910574885"
    ],
    "_genome_taxon": [
        "uncultured",
        "Dorea",
        "sp.",
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Lachnospirales",
        "f__Lachnospiraceae",
        "g__Sporofaciens",
        "s__Sporofaciens sp910574885",
        "Bacteria",
        "Bacillota",
        "A",
        "Clostridia",
        "Lachnospirales",
        "Lachnospiraceae",
        "Sporofaciens",
        "Sporofaciens",
        "sp910574885"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}