{ "type": "genome", "identifier": "GCA_948439895.1", "organism": "uncultured Lachnospiraceae bacterium", "title": "uncultured Lachnospiraceae bacterium", "description": "derived from environmental source; derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "EMG", "publication": [ {} ], "properties": { "assembly_accession": "GCA_948439895.1", "bioproject": "PRJEB58022", "biosample": "SAMEA112250275", "wgs_master": "CAOJNN000000000.1", "refseq_category": "na", "taxid": "297314", "species_taxid": "297314", "organism_name": "uncultured Lachnospiraceae bacterium", "infraspecific_name": "", "isolate": "SRR18243795_bin.23_metawrap_v1.3_MAG", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2023/02/03", "asm_name": "SRR18243795_bin.23_metawrap_v1.3_MAG", "submitter": "EMG", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/948/439/895/GCA_948439895.1_SRR18243795_bin.23_metawrap_v1.3_MAG", "excluded_from_refseq": "derived from environmental source; derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2023-02-03", "dateModified": "2023-02-03", "datePublished": "2023-02-03", "_annotation": { "sample_count": 1, "sample_organism": [ "uncultured Lachnospiraceae bacterium" ], "sample_taxid": [ "297314" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Germany" ], "sample_host_location_id": [], "data_size": "0.823 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 95.83, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2861526", "Number of Sequences": "78", "Longest Sequences (bp)": "131005", "N50 (bp)": "54733", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "45.9", "Number of CDSs": "2736", "Average Protein Length": "312.9", "Coding Ratio (%)": "89.8", "Number of rRNAs": "0", "Number of tRNAs": "24", "Number of CRISPRs": "1" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "[Clostridium] scindens", "strain": "strain=ATCC 35704", "accession": "GCA_000154505.1", "taxid": 29347, "species_taxid": 29347, "relation_to_type": "suspected-type", "validated": true, "ani": 77.4822, "matched_fragments": 147, "total_fragments": 919, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Merdimonas faecis", "strain": "strain=BR31", "accession": "GCA_001754075.1", "taxid": 1653435, "species_taxid": 1653435, "relation_to_type": "type", "validated": true, "ani": 77.4801, "matched_fragments": 135, 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"status": "below_threshold" }, { "organism_name": "Schaedlerella arabinosiphila", "strain": "strain=DSM 106076", "accession": "GCA_003885045.1", "taxid": 2044587, "species_taxid": 2044587, "relation_to_type": "type", "validated": true, "ani": 77.3326, "matched_fragments": 123, "total_fragments": 919, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Faecalimonas umbilicata", "strain": "strain=DSM 103426", "accession": "GCA_004346095.1", "taxid": 1912855, "species_taxid": 1912855, "relation_to_type": "type", "validated": true, "ani": 77.1495, "matched_fragments": 56, "total_fragments": 919, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Dorea formicigenerans", "strain": "strain=ATCC 27755", "accession": "GCA_000169235.1", "taxid": 39486, "species_taxid": 39486, "relation_to_type": "suspected-type", "validated": true, "ani": 77.0928, "matched_fragments": 103, "total_fragments": 919, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Dorea formicigenerans", "strain": "strain=ATCC 27755", "accession": "GCA_025150245.1", "taxid": 39486, "species_taxid": 39486, "relation_to_type": "suspected-type", "validated": true, "ani": 77.0431, "matched_fragments": 104, "total_fragments": 919, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bariatricus massiliensis", "strain": "strain=AT12", "accession": "GCA_900086725.1", "taxid": 1745713, "species_taxid": 1745713, "relation_to_type": "type", "validated": true, "ani": 76.9665, "matched_fragments": 73, "total_fragments": 919, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mediterraneibacter butyricigenes", "strain": "strain=KCTC 15684", "accession": "GCA_003574295.1", "taxid": 2316025, "species_taxid": 2316025, "relation_to_type": "type", "validated": true, "ani": 76.8289, "matched_fragments": 59, "total_fragments": 919, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Marvinbryantia 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