{ "tc_result": [ { "organism_name": "Prevotella stercorea", "strain": "strain=DSM 18206", "accession": "GCA_000235885.1", "taxid": 363265, "species_taxid": 363265, "relation_to_type": "suspected-type", "validated": true, "ani": 76.9984, "matched_fragments": 124, "total_fragments": 779, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hallella faecis", "strain": "strain=CLA-AA-H145", "accession": "GCA_018789675.1", "taxid": 2841596, "species_taxid": 2841596, "relation_to_type": "type", "validated": true, "ani": 76.8543, "matched_fragments": 95, "total_fragments": 779, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prevotella pectinovora", "strain": "strain=P4-76", "accession": "GCA_000834015.1", "taxid": 1602169, "species_taxid": 1602169, "relation_to_type": "type", "validated": true, "ani": 76.7461, "matched_fragments": 86, "total_fragments": 779, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prevotella ruminicola", "strain": "strain=ATCC 19189", "accession": "GCA_900108375.1", "taxid": 839, "species_taxid": 839, "relation_to_type": "type", "validated": true, "ani": 76.3329, "matched_fragments": 67, "total_fragments": 779, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prevotella lascolaii", "strain": "strain=khD1", "accession": "GCA_900079775.1", "taxid": 1776379, "species_taxid": 1776379, "relation_to_type": "type", "validated": true, "ani": 76.3286, "matched_fragments": 80, "total_fragments": 779, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prevotella brevis", "strain": "strain=ATCC 19188", "accession": "GCA_000621725.1", "taxid": 83231, "species_taxid": 83231, "relation_to_type": "type", "validated": true, "ani": 76.324, "matched_fragments": 76, "total_fragments": 779, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prevotella baroniae", "strain": "strain=JCM 13447", "accession": "GCA_000613565.1", "taxid": 305719, "species_taxid": 305719, "relation_to_type": "type", "validated": true, "ani": 76.1191, "matched_fragments": 57, "total_fragments": 779, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prevotella baroniae", "strain": "strain=DSM 16972", "accession": "GCA_000426585.1", "taxid": 305719, "species_taxid": 305719, "relation_to_type": "type", "validated": true, "ani": 76.0818, "matched_fragments": 59, "total_fragments": 779, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prevotella mizrahii", "strain": "strain=LKV-178-WT-2A", "accession": "GCA_009695775.1", "taxid": 2606637, "species_taxid": 2606637, "relation_to_type": "type", "validated": true, "ani": 76.0667, "matched_fragments": 61, "total_fragments": 779, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 57.64, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_900552675.1", "gtdb_species": "s__Prevotella sp900552675", "ani": 96.9725, "matched_fragments": 532, "total_fragments": 779, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.55", "min_intra_species_ani": "95.81", "mean_intra_species_af": "0.80", "min_intra_species_af": "0.75", "num_clustered_genomes": 5, "status": "conclusive" }, { "accession": "GCA_900543975.1", "gtdb_species": "s__Prevotella sp900543975", "ani": 79.2113, "matched_fragments": 282, "total_fragments": 779, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.48", "min_intra_species_ani": "97.34", "mean_intra_species_af": "0.84", "min_intra_species_af": "0.79", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCA_900553155.1", "gtdb_species": "s__Prevotella sp900553155", "ani": 77.3627, "matched_fragments": 107, "total_fragments": 779, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.04", "min_intra_species_ani": "96.93", "mean_intra_species_af": "0.80", "min_intra_species_af": "0.75", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCA_900552515.1", "gtdb_species": "s__Prevotella sp900552515", "ani": 77.3384, "matched_fragments": 116, "total_fragments": 779, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.61", "min_intra_species_ani": "97.50", "mean_intra_species_af": "0.85", "min_intra_species_af": "0.85", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCA_900550035.1", "gtdb_species": "s__Prevotella sp900550035", "ani": 77.1831, "matched_fragments": 162, "total_fragments": 779, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.97", "min_intra_species_ani": "99.93", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.97", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_019052365.1", "gtdb_species": "s__Prevotella sp000434975", "ani": 77.1627, "matched_fragments": 124, "total_fragments": 779, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.22", "min_intra_species_ani": "96.59", "mean_intra_species_af": "0.82", "min_intra_species_af": "0.74", "num_clustered_genomes": 11, "status": "-" }, { "accession": "GCF_002265625.1", "gtdb_species": "s__Prevotella sp002265625", "ani": 77.1057, "matched_fragments": 109, "total_fragments": 779, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.90", "min_intra_species_ani": "96.80", "mean_intra_species_af": "0.88", "min_intra_species_af": "0.86", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCA_900546575.1", "gtdb_species": "s__Prevotella sp900546575", "ani": 77.0418, "matched_fragments": 125, "total_fragments": 779, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.21", "min_intra_species_ani": "95.49", "mean_intra_species_af": "0.86", "min_intra_species_af": "0.86", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_000235885.1", "gtdb_species": "s__Prevotella stercorea", "ani": 77.0197, "matched_fragments": 123, "total_fragments": 779, "gtdb_taxonomy": 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"d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.22", "min_intra_species_ani": "99.22", "mean_intra_species_af": "0.83", "min_intra_species_af": "0.83", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_017458125.1", "gtdb_species": "s__Prevotella sp017458125", "ani": 75.7346, "matched_fragments": 55, "total_fragments": 779, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.42", "min_intra_species_ani": "97.42", "mean_intra_species_af": "0.81", "min_intra_species_af": "0.81", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_017478085.1", "gtdb_species": "s__Prevotella sp017478085", "ani": 75.7145, "matched_fragments": 64, "total_fragments": 779, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }