{ "type": "genome", "identifier": "GCA_948468835.1", "organism": "uncultured Eubacteriaceae bacterium", "title": "uncultured Eubacteriaceae bacterium", "description": "derived from environmental source; derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "EMG", "publication": [ {} ], "properties": { "assembly_accession": "GCA_948468835.1", "bioproject": "PRJEB58054", "biosample": "SAMEA112353679", "wgs_master": "CAOKJT000000000.1", "refseq_category": "na", "taxid": "203524", "species_taxid": "203524", "organism_name": "uncultured Eubacteriaceae bacterium", "infraspecific_name": "", "isolate": "SRR17684623_bin.47_metawrap_v1.3_MAG", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2023/02/03", "asm_name": "SRR17684623_bin.47_metawrap_v1.3_MAG", "submitter": "EMG", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/948/468/835/GCA_948468835.1_SRR17684623_bin.47_metawrap_v1.3_MAG", "excluded_from_refseq": "derived from environmental source; derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2023-02-03", "dateModified": "2023-02-03", "datePublished": "2023-02-03", "_annotation": { "sample_count": 1, "sample_organism": [ "uncultured Eubacteriaceae bacterium" ], "sample_taxid": [ "203524" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Canada" ], "sample_host_location_id": [], "data_size": "0.701 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 90.91, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2447824", "Number of Sequences": "93", "Longest Sequences (bp)": "198191", "N50 (bp)": "45057", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "47.1", "Number of CDSs": "2344", "Average Protein Length": "307.7", "Coding Ratio (%)": "88.4", "Number of rRNAs": "0", "Number of tRNAs": "26", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Merdimonas faecis", "strain": "strain=BR31", "accession": "GCA_001754075.1", "taxid": 1653435, "species_taxid": 1653435, "relation_to_type": "type", "validated": true, "ani": 77.2116, "matched_fragments": 116, "total_fragments": 763, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bariatricus massiliensis", "strain": "strain=AT12", "accession": "GCA_900086725.1", "taxid": 1745713, "species_taxid": 1745713, "relation_to_type": "type", "validated": true, "ani": 77.0856, "matched_fragments": 80, "total_fragments": 763, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "[Clostridium] scindens", "strain": "strain=ATCC 35704", "accession": "GCA_000154505.1", "taxid": 29347, "species_taxid": 29347, "relation_to_type": "suspected-type", "validated": true, "ani": 76.9891, "matched_fragments": 122, "total_fragments": 763, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "[Clostridium] scindens", "strain": "strain=ATCC 35704", "accession": "GCA_004295125.1", "taxid": 29347, "species_taxid": 29347, "relation_to_type": "suspected-type", "validated": true, "ani": 76.9237, "matched_fragments": 123, "total_fragments": 763, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Dorea phocaeensis", "strain": "strain=Marseille-P4003", "accession": "GCA_900240315.1", "taxid": 2040291, "species_taxid": 2040291, "relation_to_type": "type", "validated": true, "ani": 76.8977, "matched_fragments": 104, "total_fragments": 763, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Marvinbryantia formatexigens", "strain": "strain=DSM 14469", "accession": "GCA_000173815.1", "taxid": 168384, "species_taxid": 168384, "relation_to_type": "type", "validated": true, "ani": 76.711, "matched_fragments": 56, "total_fragments": 763, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mediterraneibacter massiliensis", "strain": "strain=Marseille-P2086", "accession": "GCA_001487105.1", "taxid": 1720300, "species_taxid": 1720300, "relation_to_type": "type", "validated": true, "ani": 76.7089, "matched_fragments": 59, "total_fragments": 763, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Dorea formicigenerans", "strain": "strain=ATCC 27755", "accession": "GCA_025150245.1", "taxid": 39486, "species_taxid": 39486, "relation_to_type": "suspected-type", "validated": true, "ani": 76.6848, "matched_fragments": 82, "total_fragments": 763, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Dorea formicigenerans", "strain": "strain=ATCC 27755", "accession": "GCA_000169235.1", "taxid": 39486, "species_taxid": 39486, "relation_to_type": "suspected-type", "validated": true, "ani": 76.6829, "matched_fragments": 82, "total_fragments": 763, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Marvinbryantia formatexigens", "strain": "strain=I-52", "accession": "GCA_900102475.1", "taxid": 168384, "species_taxid": 168384, "relation_to_type": "type", "validated": true, "ani": 76.6692, "matched_fragments": 57, "total_fragments": 763, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Coprococcus comes", "strain": "strain=ATCC 27758", "accession": "GCA_025149785.1", "taxid": 410072, "species_taxid": 410072, "relation_to_type": "type", "validated": true, "ani": 76.6363, "matched_fragments": 78, "total_fragments": 763, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Marvinbryantia formatexigens", "strain": "strain=DSM 14469", "accession": "GCA_025148285.1", "taxid": 168384, "species_taxid": 168384, "relation_to_type": "type", "validated": true, "ani": 76.629, "matched_fragments": 57, "total_fragments": 763, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Faecalicatena faecalis", "strain": "strain=AGMB00832", "accession": "GCA_012524165.2", "taxid": 2726362, "species_taxid": 2726362, "relation_to_type": "type", "validated": true, "ani": 76.554, "matched_fragments": 81, "total_fragments": 763, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Luxibacter massiliensis", "strain": "strain=Marseille-P5551", "accession": "GCA_900604355.1", "taxid": 2219695, "species_taxid": 2219695, "relation_to_type": "type", "validated": true, "ani": 76.5135, "matched_fragments": 60, "total_fragments": 763, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Dorea longicatena", "strain": "strain=DSM 13814", "accession": "GCA_025150085.1", "taxid": 88431, "species_taxid": 88431, "relation_to_type": "type", "validated": true, "ani": 76.4405, "matched_fragments": 94, "total_fragments": 763, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "[Ruminococcus] gnavus", "strain": "strain=ATCC 29149", "accession": "GCA_002959615.1", "taxid": 33038, "species_taxid": 33038, "relation_to_type": "suspected-type", "validated": true, "ani": 76.4189, "matched_fragments": 83, "total_fragments": 763, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Muricomes intestini", "strain": "strain=DSM 29489", "accession": "GCA_004346165.1", "taxid": 1796634, "species_taxid": 1796634, "relation_to_type": "type", "validated": true, "ani": 76.2489, "matched_fragments": 52, "total_fragments": 763, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 90.91, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": 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