{ "type": "genome", "identifier": "GCF_000007085.1", "organism": "Caldanaerobacter subterraneus subsp. tengcongensis MB4", "title": "Caldanaerobacter subterraneus subsp. tengcongensis MB4", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Beijing Center.HGP", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000007085.1", "bioproject": "PRJNA224116", "biosample": "SAMN02603009", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "273068", "species_taxid": "911092", "organism_name": "Caldanaerobacter subterraneus subsp. tengcongensis MB4", "infraspecific_name": "strain=MB4", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2002/05/14", "asm_name": "ASM708v1", "asm_submitter": "Beijing Center.HGP", "gbrs_paired_asm": "GCA_000007085.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/085/GCF_000007085.1_ASM708v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "2689445", "genome_size_ungapped": "2689445", "gc_percent": "37.500000", "replicon_count": "1", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_000007085.1-RS_2024_12_09", "annotation_date": "2024-12-09", "total_gene_count": "2728", "protein_coding_gene_count": "2548", "non_coding_gene_count": "73", "pubmed_id": "11997336" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2002-05-14", "dateModified": "2002-05-14", "datePublished": "2002-05-14", "_annotation": { "sample_count": 1, "sample_organism": [ "Caldanaerobacter subterraneus subsp. tengcongensis MB4" ], "sample_taxid": [ "273068" ], 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"d__Bacteria;p__Firmicutes_A;c__Thermoanaerobacteria;o__Thermoanaerobacterales;f__Thermoanaerobacteraceae;g__Thermoanaerobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.59", "min_intra_species_ani": "96.59", "mean_intra_species_af": "0.87", "min_intra_species_af": "0.87", "num_clustered_genomes": 2, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": -0.398, "cell_length": 0.0, "doubling_h": 0.029, "growth_tmp": 70.975, "optimum_tmp": 73.0, "optimum_ph": 7.25, "genome_size": 2649090.75, "gc_content": 37.575, "coding_genes": 2519.333, "rRNA16S_genes": 4.0, "tRNA_genes": 56.0, "gram_stain": 1.0, "sporulation": 1.0, "motility": 0.0, "range_salinity": null, "facultative_respiration": 0.0, "anaerobic_respiration": 1.0, "aerobic_respiration": 0.0, "mesophilic_range_tmp": 0.0, "thermophilic_range_tmp": 1.0, "psychrophilic_range_tmp": 0.0, "bacillus_cell_shape": 1.0, "coccus_cell_shape": 0.0, "filament_cell_shape": 0.0, "coccobacillus_cell_shape": 0.0, "vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.0 }, "_genome_taxon": [ "Caldanaerobacter", "subterraneus", "subsp.", "tengcongensis", "MB4" ], "quality": 5, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }