# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_5	LOCUS_00050	sequence1:9395..11191(-)	partial			WP_010943656.1	acyl-[ACP]--phospholipid O-acyltransferase	90.0	47.3	39.3
MGA_16	LOCUS_00160	sequence1:29874..31583(+)	partial			WP_004080167.1	chromosome segregation protein SMC	71.5	31.7	19.6
MGA_24	LOCUS_00240	sequence1:37531..42066(-)	partial			WP_011105498.1	RHS repeat-associated core domain-containing protein	39.9	36.9	24.5
MGA_25	LOCUS_00250	sequence1:42300..43094(+)	partial			WP_001145827.1	50S ribosomal protein L11 methyltransferase	73.5	67.2	31.7
MGA_33	LOCUS_00330	sequence1:54446..54745(+)	frameshift		54648,54417,54291	WP_000469134.1	GNAT family N-acetyltransferase	77.8	45.8	41.6
MGA_35	LOCUS_00350	sequence1:56119..57060(+)	partial			WP_015039930.1	M4 family metallopeptidase	75.7	73.3	29.7
MGA_36	LOCUS_00360	sequence1:57233..60103(-)	partial			WP_002694989.1	leucine-rich repeat domain-containing protein	51.0	75.4	32.4
MGA_38	LOCUS_00380	sequence1:61805..65227(-)	partial			WP_011020246.1	tetratricopeptide repeat protein	30.4	40.8	26.5
MGA_43	LOCUS_00430	sequence1:77584..81045(-)	partial			WP_011022220.1	tetratricopeptide repeat protein	32.8	51.3	23.1
MGA_48	LOCUS_00480	sequence1:91605..95060(-)	partial			WP_118837886.1	CHAT domain-containing protein	61.8	79.4	21.0
MGA_49	LOCUS_00490	sequence1:95214..96353(-)	partial			WP_118837886.1	CHAT domain-containing protein	63.6	27.5	23.4
MGA_51	LOCUS_00510	sequence1:98629..101544(-)	partial			WP_011020246.1	tetratricopeptide repeat protein	31.5	35.3	27.1
MGA_56	LOCUS_00560	sequence1:110545..113988(-)	partial			WP_010875712.1	tetratricopeptide repeat protein	29.2	71.2	24.4
MGA_57	LOCUS_00570	sequence1:114884..115738(-)	partial			WP_005766322.1	M4 family metallopeptidase	65.1	60.1	27.1
MGA_65	LOCUS_00650	sequence1:124467..125519(-)	partial			WP_010883377.1	rod shape-determining protein MreC	70.6	65.0	32.8
MGA_86	LOCUS_00860	sequence1:150867..151676(-)	partial			WP_002858148.1	glycosyltransferase	91.8	48.7	41.3
MGA_104	LOCUS_01040	sequence1:174928..175764(-)	partial			WP_002361277.1	amino acid ABC transporter substrate-binding protein/permease	89.2	34.3	25.0
MGA_132	LOCUS_01320	sequence1:211196..212272(+)	partial			WP_205161317.1	S-layer family protein	29.3	9.1	38.0
MGA_142	LOCUS_01420	sequence1:224284..224895(-)	partial			WP_002000673.1	aspartyl/asparaginyl beta-hydroxylase domain-containing protein	98.0	64.2	28.4
MGA_148	LOCUS_01480	sequence1:231569..232468(+)	frameshift		232465,232462	WP_116269310.1	tetratricopeptide repeat protein	65.2	45.2	56.9
MGA_158	LOCUS_01580	sequence1:244095..244775(-)	partial			WP_009872102.1	biotin--[acetyl-CoA-carboxylase] ligase	68.6	82.1	38.5
MGA_164	LOCUS_01640	sequence1:250492..252972(+)	partial			WP_048065734.1	tetratricopeptide repeat protein	35.7	72.5	22.6
MGA_165	LOCUS_01650	sequence1:253342..256755(+)	partial			WP_048065734.1	tetratricopeptide repeat protein	26.0	66.3	24.3
MGA_166	LOCUS_01660	sequence1:257123..260713(+)	partial			WP_048065734.1	tetratricopeptide repeat protein	26.1	77.5	24.1
MGA_171	LOCUS_01710	sequence1:268832..269689(+)	partial			WP_000959282.1	competence protein CoiA family protein	47.7	41.8	29.7
MGA_173	LOCUS_01730	sequence1:270611..271741(-)	partial			WP_011125413.1	acyltransferase family protein	89.9	47.0	29.2
MGA_187	LOCUS_01870	sequence1:290379..291191(-)	partial			WP_005766322.1	M4 family metallopeptidase	67.4	59.3	27.4
MGA_214	LOCUS_02140	sequence1:321638..322792(+)	partial			WP_003243259.1	assimilatory sulfite reductase (NADPH) flavoprotein subunit	99.2	62.1	41.1
MGA_216	LOCUS_02160	sequence1:323752..324840(+)	partial			WP_010890822.1	ATP-grasp domain-containing protein	67.4	56.1	26.8
MGA_218	LOCUS_02180	sequence1:326571..327614(+)	partial			WP_011118269.1	EF-P beta-lysylation protein EpmB	81.0	74.5	46.1
MGA_220	LOCUS_02200	sequence1:329603..330727(+)	partial			WP_012546043.1	ATP-dependent chaperone ClpB	81.3	35.6	39.6
MGA_235	LOCUS_02350	sequence1:347183..347602(+)	partial			WP_009871802.1	helix-turn-helix domain-containing protein	90.6	68.3	65.9
MGA_239	LOCUS_02390	sequence1:353704..358236(+)	partial			WP_009871805.1	protein translocase subunit SecD	70.9	73.7	36.7
MGA_242	LOCUS_02420	sequence1:360520..361380(+)	partial			WP_011337233.1	Mrp/NBP35 family ATP-binding protein	87.1	69.7	43.6
MGA_251	LOCUS_02510	sequence1:372491..377908(-)	partial			WP_010933192.1	leucine-rich repeat domain-containing protein	21.2	27.7	38.9
MGA_299	LOCUS_02990	sequence1:433249..434091(+)	partial			WP_009871615.1	N-acetylmuramoyl-L-alanine amidase	69.3	75.3	44.4
MGA_318	LOCUS_03180	sequence1:456154..458082(-)	partial			WP_047813794.1	adenylate cyclase	42.2	57.3	29.5
MGA_355	LOCUS_03550	sequence1:500248..502983(-)	partial			WP_010939362.1	DEAD/DEAH box helicase	61.5	53.2	37.3
MGA_378	LOCUS_03780	sequence1:534541..537063(+)	partial			WP_010880376.1	chromosome segregation protein SMC	73.5	52.6	21.0
MGA_384	LOCUS_03840	sequence1:542366..543193(-)	partial			WP_002295743.1	IS982-like element ISEfm1 family transposase	59.6	53.3	28.9
MGA_425	LOCUS_04250	sequence1:578222..578962(-)	partial			WP_003548298.1	RNA methyltransferase	66.3	65.1	25.4
MGA_434	LOCUS_04340	sequence1:589035..590210(-)	partial			WP_000550456.1	rhomboid family intramembrane serine protease GlpG	38.6	49.5	33.8
MGA_435	LOCUS_04350	sequence1:590214..590726(-)	partial			WP_000867682.1	bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE	88.2	31.7	44.4
MGA_440	LOCUS_04400	sequence1:599806..600489(+)	partial			WP_005817349.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	50.2	48.7	36.2
MGA_446	LOCUS_04460	sequence1:607191..608279(-)	partial			WP_011109032.1	ComEC/Rec2 family competence protein	77.1	39.1	29.1
MGA_447	LOCUS_04470	sequence1:608972..609778(+)	partial			WP_010882686.1	hypothetical protein	72.8	70.2	27.0
MGA_453	LOCUS_04530	sequence1:615896..617305(+)	partial			WP_015776294.1	DNA recombination protein RmuC	62.0	73.4	40.3
MGA_459	LOCUS_04590	sequence1:624276..625175(+)	partial			WP_011037997.1	MFS transporter	91.6	58.6	34.2
MGA_462	LOCUS_04620	sequence1:626793..627113(-)	partial			WP_011261941.1	GNAT family N-acetyltransferase	96.2	65.2	41.2
MGA_467	LOCUS_04670	sequence1:629484..629768(+)	internal_stop_codon	629457..629459(+),629433..629435(+)		WP_001058773.1	mep operon protein MepB	84.0	47.3	40.5
MGA_477	LOCUS_04770	sequence1:641984..642397(+)	partial			WP_143274470.1	DNA-3-methyladenine glycosylase	80.3	32.9	33.6
MGA_488	LOCUS_04880	sequence1:649432..649773(+)	frameshift,internal_stop_codon	649369..649371(+),650062..650064(+)	649770,649782	WP_011140159.1	IS982 family transposase	100.0	38.8	46.9
MGA_489	LOCUS_04890	sequence1:649781..650062(+)	frameshift,internal_stop_codon	650062..650064(+)	649770,649782	WP_011140159.1	IS982 family transposase	98.9	32.0	53.8
MGA_491	LOCUS_04910	sequence1:651777..656384(+)	partial			WP_013223320.1	RHS repeat-associated core domain-containing protein	47.2	55.8	21.9
MGA_493	LOCUS_04930	sequence1:657465..657944(-)	partial			WP_000335698.1	YfjI family protein	67.9	23.6	33.9
MGA_500	LOCUS_05000	sequence1:661780..662136(-)	frameshift,internal_stop_codon	662387..662389(-)	662299	WP_105749803.1	IS5 family transposase	99.2	45.1	65.5
MGA_501	LOCUS_05010	sequence1:662387..662572(-)	frameshift,internal_stop_codon	662387..662389(-)	662299	WP_105749803.1	IS5 family transposase	100.0	23.1	65.6
MGA_502	LOCUS_05020	sequence1:662659..662877(+)	partial			WP_005169134.1	ribosomal protein S5-alanine N-acetyltransferase	100.0	37.1	56.9
MGA_512	LOCUS_05120	sequence1:672738..672995(+)	frameshift		672735	WP_015444602.1	trifunctional transcriptional activator/DNA repair protein Ada/methylated-DNA--[protein]-cysteine S-methyltransferase	88.2	21.5	55.3
MGA_514	LOCUS_05140	sequence1:675942..676145(-)	partial			WP_048065891.1	DUF378 domain-containing protein	80.6	70.1	57.4
MGA_520	LOCUS_05200	sequence1:681611..681823(+)	frameshift		681527	WP_000636379.1	transposase	88.6	45.6	46.8
MGA_521	LOCUS_05210	sequence1:681838..682560(+)	frameshift,internal_stop_codon	682559..682561(+)	681769	WP_155887481.1	IS3 family transposase	98.8	57.6	53.8
MGA_530	LOCUS_05300	sequence1:694411..694716(-)	partial			WP_011963077.1	YchJ family metal-binding protein	96.0	71.8	40.8
MGA_538	LOCUS_05380	sequence1:701880..702236(-)	partial			WP_010725203.1	peptide chain release factor 2	58.5	20.1	51.4
MGA_545	LOCUS_05450	sequence1:712159..713076(-)	partial			WP_004081431.1	SDR family oxidoreductase	62.6	60.2	30.9
MGA_563	LOCUS_05630	sequence1:730083..731111(+)	partial			WP_010892004.1	DUF1207 domain-containing protein	76.3	62.9	40.5
MGA_579	LOCUS_05790	sequence1:748261..748740(+)	partial			WP_001017942.1	DUF2760 domain-containing protein	76.1	58.1	42.6
MGA_587	LOCUS_05870	sequence1:755961..756164(+)	frameshift		756107	WP_009873722.1	transcription termination/antitermination protein NusG	83.6	30.8	57.1
MGA_588	LOCUS_05880	sequence1:756161..756508(+)	frameshift		756107	WP_010892148.1	transcription termination/antitermination protein NusG	98.3	62.1	68.1
MGA_608	LOCUS_06080	sequence1:782675..782953(-)	partial			WP_009872566.1	exodeoxyribonuclease VII small subunit	63.0	80.6	53.4
MGA_609	LOCUS_06090	sequence1:782946..784433(-)	partial			WP_010942411.1	exodeoxyribonuclease VII large subunit	71.9	79.2	45.5
MGA_620	LOCUS_06200	sequence1:795462..798539(-)	partial			WP_010943302.1	efflux RND transporter permease subunit	98.6	68.0	38.6
MGA_621	LOCUS_06210	sequence1:798536..799348(-)	partial			WP_005784707.1	efflux RND transporter periplasmic adaptor subunit	90.0	61.4	30.9
MGA_622	LOCUS_06220	sequence1:799350..800618(-)	partial			WP_008760594.1	TolC family protein	75.6	65.3	20.2
MGA_624	LOCUS_06240	sequence1:802038..803099(-)	partial			WP_009873448.1	LptF/LptG family permease	32.0	31.9	32.7
MGA_626	LOCUS_06260	sequence1:803750..805090(+)	partial			WP_010725364.1	tRNA lysidine(34) synthetase TilS	59.4	80.1	35.2
MGA_629	LOCUS_06290	sequence1:809306..810049(-)	partial			WP_000970524.1	glycosyltransferase	38.9	28.5	33.3
MGA_632	LOCUS_06320	sequence1:814676..814951(-)	partial			WP_197530059.1	IS630 family transposase	91.2	28.5	44.6
MGA_643	LOCUS_06430	sequence1:823442..824110(+)	partial			WP_010882767.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	99.1	60.7	59.1
MGA_658	LOCUS_06580	sequence1:838725..839621(+)	partial			WP_011403492.1	TIGR01777 family oxidoreductase	99.3	64.3	47.7
MGA_667	LOCUS_06670	sequence1:850473..851639(+)	partial			WP_011263632.1	DUF368 domain-containing protein	34.8	43.2	41.5
MGA_695	LOCUS_06950	sequence1:881258..881734(-)	internal_stop_codon	881258..881260(-)		WP_010947931.1	Dot/Icm type IV secretion system effector LpnE	34.8	14.7	54.5
MGA_696	LOCUS_06960	sequence1:882023..882952(-)	partial			WP_116269310.1	tetratricopeptide repeat protein	65.7	47.1	52.2
MGA_698	LOCUS_06980	sequence1:883699..884484(-)	partial			WP_116269310.1	tetratricopeptide repeat protein	98.5	59.6	45.5
MGA_699	LOCUS_06990	sequence1:885267..886505(-)	partial			WP_116269310.1	tetratricopeptide repeat protein	71.8	68.7	45.3
MGA_701	LOCUS_07010	sequence1:888930..890267(-)	frameshift		888938,888941,888935	WP_116269310.1	tetratricopeptide repeat protein	62.0	64.0	57.6
MGA_704	LOCUS_07040	sequence1:892353..893006(+)	partial			WP_003226718.1	nucleoside triphosphate pyrophosphohydrolase	72.8	32.1	41.8
MGA_725	LOCUS_07250	sequence1:927202..932709(-)	partial			WP_025330854.1	RHS repeat-associated core domain-containing protein	53.0	61.5	23.9
MGA_728	LOCUS_07280	sequence1:935681..937216(-)	partial			WP_009873569.1	transglutaminase family protein	66.7	70.0	32.1
MGA_749	LOCUS_07490	sequence1:965905..966678(+)	partial			WP_013230598.1	aspartate kinase	94.2	57.5	49.0
MGA_772	LOCUS_07720	sequence1:992013..993464(-)	partial			WP_198127805.1	GMC family oxidoreductase	64.0	54.0	26.4
MGA_778	LOCUS_07780	sequence1:998556..999185(+)	frameshift		999032	WP_086016632.1	IS1-like element ISYps7 family transposase	70.3	61.2	28.2
MGA_782	LOCUS_07820	sequence1:1001722..1002516(+)	partial			WP_004081072.1	bifunctional phosphoglycerate kinase/triose-phosphate isomerase	92.4	37.3	47.3
MGA_783	LOCUS_07830	sequence1:1002513..1002806(+)	partial			WP_009872586.1	preprotein translocase subunit SecG	75.3	71.6	54.8
MGA_796	LOCUS_07960	sequence1:1018612..1020744(-)	partial			WP_010882901.1	FtsX-like permease family protein	47.9	65.0	30.6
MGA_800	LOCUS_08000	sequence1:1022904..1023980(-)	partial			WP_011143171.1	glucose-6-phosphate dehydrogenase assembly protein OpcA	65.4	63.5	26.4
MGA_810	LOCUS_08100	sequence1:1037993..1038169(+)	partial			WP_047373490.1	ATP-binding cassette domain-containing protein	100.0	17.3	60.3
MGA_823	LOCUS_08230	sequence1:1051571..1052218(+)	internal_stop_codon	1051562..1051564(+)		WP_010989779.1	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase	97.7	80.7	24.8
MGA_824	LOCUS_08240	sequence1:1052689..1053186(-)	partial			WP_086016632.1	IS1-like element ISYps7 family transposase	81.8	56.0	23.7
MGA_827	LOCUS_08270	sequence1:1054682..1056052(+)	frameshift		1056330	WP_011087420.1	protein-L-isoaspartate(D-aspartate) O-methyltransferase	95.4	63.8	55.4
MGA_828	LOCUS_08280	sequence1:1056521..1057234(+)	frameshift,internal_stop_codon	1056458..1056460(+),1056353..1056355(+),1056887..1056889(+)	1056832,1056330,1057208,1056895	WP_011087420.1	protein-L-isoaspartate(D-aspartate) O-methyltransferase	96.2	33.3	44.3
MGA_829	LOCUS_08290	sequence1:1057234..1057425(+)	frameshift		1057207	WP_011087420.1	protein-L-isoaspartate(D-aspartate) O-methyltransferase	93.7	8.7	57.6
MGA_832	LOCUS_08320	sequence1:1058844..1059506(+)	partial			WP_220358508.1	protein-L-isoaspartate(D-aspartate) O-methyltransferase	97.7	33.0	55.3
MGA_844	LOCUS_08440	sequence1:1071642..1072031(+)	frameshift,internal_stop_codon	1072029..1072031(+)	1071682,1071645	WP_011140159.1	IS982 family transposase	83.7	37.5	53.2
MGA_869	LOCUS_08690	sequence1:1099932..1103978(-)	partial			WP_010882840.1	hypothetical protein	36.4	42.9	23.6
MGA_875	LOCUS_08750	sequence1:1113215..1114192(+)	partial			WP_198677105.1	M48 family metallopeptidase	96.0	50.4	40.2
MGA_876	LOCUS_08760	sequence1:1114294..1114674(-)	frameshift		1114685	WP_164920657.1	IS5-like element ISTel4 family transposase	100.0	49.4	74.6
MGA_880	LOCUS_08800	sequence1:1118477..1119793(+)	partial			WP_010965624.1	glycosyltransferase	87.4	37.5	41.4
MGA_881	LOCUS_08810	sequence1:1119808..1121622(-)	partial			WP_050518129.1	glycosyltransferase	80.1	54.7	26.8
MGA_882	LOCUS_08820	sequence1:1122195..1122662(-)	partial			WP_011072655.1	DoxX family protein	61.9	50.8	41.0
MGA_883	LOCUS_08830	sequence1:1122677..1123528(-)	partial			WP_003112821.1	c-type cytochrome	83.4	35.0	36.3
MGA_893	LOCUS_08930	sequence1:1135325..1135594(+)	partial			WP_000177186.1	stress response translation initiation inhibitor YciH	70.8	59.2	44.6
MGA_913	LOCUS_09130	sequence1:1162092..1162670(+)	partial			WP_010942963.1	lipocalin family protein	74.0	72.4	42.0
MGA_917	LOCUS_09170	sequence1:1165402..1165836(-)	partial			WP_010879633.1	thioredoxin	55.6	76.2	35.0
MGA_929	LOCUS_09290	sequence1:1177325..1177600(+)	partial			WP_011070547.1	GIY-YIG nuclease family protein	93.4	68.3	40.7
MGA_938	LOCUS_09380	sequence1:1185667..1190484(-)	partial			WP_010933192.1	leucine-rich repeat domain-containing protein	13.1	15.2	39.0
MGA_953	LOCUS_09530	sequence1:1202792..1203052(+)	frameshift,internal_stop_codon	1203230..1203232(+),1203161..1203163(+)	1203043	WP_145162746.1	IS3-like element ISSme1 family transposase	98.8	21.9	56.5
MGA_954	LOCUS_09540	sequence1:1203421..1203594(+)	internal_stop_codon	1203229..1203231(+)		WP_156795633.1	IS3 family transposase	96.5	13.9	50.9
MGA_958	LOCUS_09580	sequence1:1205771..1207522(+)	partial			WP_011388592.1	leucine-rich repeat domain-containing protein	36.5	18.1	35.2
MGA_962	LOCUS_09620	sequence1:1210694..1211035(-)	frameshift,internal_stop_codon	1210694..1210696(-),1210691..1210693(-)	1210651	WP_105530349.1	putative addiction module antidote protein	79.6	46.4	47.8
MGA_965	LOCUS_09650	sequence1:1212555..1213367(-)	frameshift		1213435	WP_155887481.1	IS3 family transposase	97.4	63.9	53.8
MGA_966	LOCUS_09660	sequence1:1213382..1213759(-)	frameshift		1213423	WP_103153860.1	IS3 family transposase	86.4	26.8	48.1
MGA_970	LOCUS_09700	sequence1:1216202..1216465(+)	frameshift		1216453	WP_145162746.1	IS3-like element ISSme1 family transposase	97.7	21.9	65.9
MGA_971	LOCUS_09710	sequence1:1216879..1217304(+)	partial			WP_145162746.1	IS3-like element ISSme1 family transposase	94.3	34.2	57.1
MGA_978	LOCUS_09780	sequence1:1229539..1229904(+)	frameshift		1229488	WP_010946555.1	IS4-like element ISLpn9 family transposase	70.2	24.1	41.4
MGA_980	LOCUS_09800	sequence1:1230237..1230446(+)	partial			WP_000843587.1	type II toxin-antitoxin system RelE/ParE family toxin	91.3	57.3	41.3
MGA_987	LOCUS_09870	sequence1:1235628..1235876(-)	internal_stop_codon	1236012..1236014(-)		WP_010044806.1	site-specific integrase	100.0	24.4	41.0
MGA_989	LOCUS_09890	sequence1:1236850..1237227(+)	frameshift		1237185	WP_103153860.1	IS3 family transposase	86.4	26.8	48.1
MGA_990	LOCUS_09900	sequence1:1237242..1238054(+)	frameshift		1237173	WP_155887481.1	IS3 family transposase	99.6	65.4	54.4
MGA_993	LOCUS_09930	sequence1:1241220..1243424(-)	partial			WP_011388592.1	leucine-rich repeat domain-containing protein	46.9	28.9	35.0
MGA_994	LOCUS_09940	sequence1:1243699..1245696(-)	partial			WP_011388592.1	leucine-rich repeat domain-containing protein	48.1	27.4	34.8
MGA_996	LOCUS_09960	sequence1:1246630..1247241(-)	partial			WP_004596591.1	ParA family protein	94.6	74.5	35.8
MGA_1017	LOCUS_10160	sequence1:1275237..1275689(+)	partial			WP_015775754.1	rRNA maturation RNase YbeY	60.0	62.7	39.6
MGA_1018	LOCUS_10170	sequence1:1276063..1277436(+)	partial			WP_010883148.1	hemolysin family protein	50.8	58.1	47.4
MGA_1025	LOCUS_10240	sequence1:1284402..1285535(-)	partial			WP_011404107.1	o-succinylbenzoate--CoA ligase	72.9	55.6	36.1
MGA_1029	LOCUS_10280	sequence1:1293973..1294278(+)	frameshift		1293794,1293916,1293837	WP_016361985.1	IS982 family transposase	91.1	31.0	48.9
MGA_1030	LOCUS_10290	sequence1:1294513..1295223(-)	partial			WP_010989779.1	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase	72.0	64.7	34.3
MGA_1032	LOCUS_10310	sequence1:1296782..1297837(-)	partial			WP_165379822.1	isochorismate synthase MenF	65.0	59.1	32.1
MGA_1033	LOCUS_10320	sequence1:1298038..1299132(-)	partial			WP_017140422.1	SdrD B-like domain-containing protein	50.5	5.8	31.1
MGA_1046	LOCUS_10450	sequence1:1318163..1319287(+)	partial			WP_010882959.1	prolipoprotein diacylglyceryl transferase	58.3	75.7	39.3
MGA_1048	LOCUS_10470	sequence1:1319822..1320526(+)	partial			WP_011228822.1	iron-sulfur cluster insertion protein ErpA	45.3	84.1	39.6
MGA_1057	LOCUS_10560	sequence1:1332947..1334761(+)	partial			WP_011963539.1	cytochrome c biogenesis protein CcsA	48.5	27.9	33.4
MGA_1063	LOCUS_10620	sequence1:1340322..1341353(-)	partial			WP_004082816.1	DNA polymerase III subunit delta	46.1	44.4	27.2
MGA_1067	LOCUS_10660	sequence1:1344824..1345300(-)	partial			WP_010883029.1	single-stranded DNA-binding protein	65.2	63.8	42.7
MGA_1076	LOCUS_10750	sequence1:1353741..1354439(-)	partial			WP_010883651.1	class I SAM-dependent methyltransferase	75.4	72.1	30.7
MGA_1082	LOCUS_10810	sequence1:1364156..1365121(-)	partial			WP_012061931.1	glycosyltransferase family 92 protein	39.9	44.1	29.9
MGA_1087	LOCUS_10860	sequence1:1369254..1370648(+)	partial			WP_011392429.1	Stk1 family PASTA domain-containing Ser/Thr kinase	50.9	38.1	23.8
MGA_1097	LOCUS_10960	sequence1:1385079..1387328(+)	partial			WP_011860868.1	ATP-binding protein	73.6	65.3	25.5
MGA_1118	LOCUS_11170	sequence1:1406721..1407509(-)	partial			WP_013229651.1	NUDIX domain-containing protein	50.4	83.3	35.3
MGA_1128	LOCUS_11270	sequence1:1415695..1417191(-)	partial			WP_009873686.1	hypothetical protein	70.3	75.1	23.0
MGA_1143	LOCUS_11420	sequence1:1432749..1433969(-)	partial			WP_012257612.1	glycosyltransferase	65.3	25.5	36.8
MGA_1144	LOCUS_11430	sequence1:1433988..1435550(-)	partial			WP_017276633.1	FkbM family methyltransferase	26.9	59.7	29.1
MGA_1154	LOCUS_11530	sequence1:1449526..1449711(+)	frameshift,internal_stop_codon	1449709..1449711(+)	1449891	WP_164920657.1	IS5-like element ISTel4 family transposase	93.4	22.4	84.2
MGA_1155	LOCUS_11540	sequence1:1449974..1450282(+)	frameshift,internal_stop_codon	1449709..1449711(+)	1449987,1449894	WP_164920657.1	IS5-like element ISTel4 family transposase	98.0	39.2	73.0
MGA_1157	LOCUS_11560	sequence1:1452865..1453224(-)	partial			WP_038093611.1	site-specific integrase	99.2	37.0	53.8
MGA_1158	LOCUS_11570	sequence1:1453516..1453848(+)	frameshift		1453788	WP_105749803.1	IS5 family transposase	83.6	34.1	57.6
MGA_1159	LOCUS_11580	sequence1:1453952..1454308(+)	frameshift		1453788	WP_115434810.1	IS5 family transposase	99.2	44.7	63.9
MGA_1161	LOCUS_11600	sequence1:1455218..1455670(-)	partial			WP_010876526.1	tyrosine-type recombinase/integrase	88.7	42.4	30.9
MGA_1168	LOCUS_11670	sequence1:1462751..1462933(+)	frameshift,internal_stop_codon	1462605..1462607(+)	1462745	WP_005459147.1	DNA/RNA non-specific endonuclease	88.3	21.2	47.2
MGA_1169	LOCUS_11680	sequence1:1463489..1464319(+)	partial			WP_013098268.1	M4 family metallopeptidase	76.4	70.5	28.2
MGA_1171	LOCUS_11700	sequence1:1467387..1467767(+)	frameshift		1467375	WP_164920657.1	IS5-like element ISTel4 family transposase	100.0	49.4	74.6
MGA_1174	LOCUS_11730	sequence1:1469833..1470897(+)	partial			WP_172625982.1	multidrug efflux MFS transporter adaptor subunit VceA	65.5	64.1	24.6
MGA_1195	LOCUS_11940	sequence1:1499819..1500304(-)	partial			WP_010908888.1	HAD-IB family hydrolase	67.7	36.7	36.9
MGA_1200	LOCUS_11990	sequence1:1507719..1508582(-)	partial			WP_010892231.1	hypothetical protein	64.5	71.6	23.7
MGA_1201	LOCUS_12000	sequence1:1508625..1509989(-)	partial			WP_010883540.1	bifunctional UDP-N-acetylmuramate--L-alanine ligase/D-alanine--D-alanine ligase	95.4	53.3	43.4
MGA_1210	LOCUS_12090	sequence1:1518840..1520756(+)	partial			WP_000548332.1	type III secretion system effector inositol phosphate phosphatase	69.6	80.3	26.4
MGA_1218	LOCUS_12170	sequence1:1529722..1530549(-)	partial			WP_002295743.1	IS982-like element ISEfm1 family transposase	59.6	53.3	28.9
MGA_1220	LOCUS_12190	sequence1:1531833..1533056(-)	partial			WP_003246685.1	ATP-dependent RNA helicase CshA	88.2	72.7	40.4
MGA_1221	LOCUS_12200	sequence1:1533041..1533850(-)	partial			WP_011057728.1	SDR family oxidoreductase	70.3	74.0	39.6
MGA_1222	LOCUS_12210	sequence1:1533853..1536021(-)	partial			WP_010882698.1	HD family phosphohydrolase	64.8	65.8	36.2
MGA_1229	LOCUS_12280	sequence1:1547722..1548012(+)	frameshift		1548112,1547988	WP_086016632.1	IS1-like element ISYps7 family transposase	72.9	30.6	38.0
MGA_1231	LOCUS_12300	sequence1:1550925..1551350(-)	internal_stop_codon	1551357..1551359(-)		WP_016361985.1	IS982 family transposase	90.8	43.8	56.9
MGA_1233	LOCUS_12320	sequence1:1554979..1555254(-)	partial			WP_165221754.1	IS630 family transposase	75.8	21.8	50.7
MGA_1246	LOCUS_12450	sequence1:1573291..1574436(-)	partial			WP_000421297.1	site-2 protease family protein	40.4	44.4	35.1
MGA_1260	LOCUS_12590	sequence1:1588888..1589571(+)	frameshift		1589553	WP_010883598.1	lipid-A-disaccharide synthase	92.5	33.1	33.8
MGA_1261	LOCUS_12600	sequence1:1589568..1590737(+)	frameshift		1589553	WP_010883598.1	lipid-A-disaccharide synthase	86.1	54.6	42.0
MGA_1278	LOCUS_12770	sequence1:1604486..1605880(-)	partial			WP_011015796.1	aminodeoxychorismate synthase component I	61.2	63.8	45.0
MGA_1280	LOCUS_12790	sequence1:1606767..1607474(-)	partial			WP_010883212.1	hypothetical protein	51.1	64.1	40.8
MGA_1285	LOCUS_12840	sequence1:1613562..1613849(+)	frameshift,internal_stop_codon	1613582..1613584(+),1613847..1613849(+)	1613556,1613501,1613590	WP_091833877.1	redoxin domain-containing protein	98.9	55.3	43.6
MGA_1291	LOCUS_12900	sequence1:1617346..1622640(+)	partial			WP_010933192.1	leucine-rich repeat domain-containing protein	19.8	27.2	34.7
MGA_1305	LOCUS_13040	sequence1:1642911..1645076(+)	partial			WP_010965494.1	motility associated factor glycosyltransferase family protein	64.9	84.0	20.9
MGA_1306	LOCUS_13050	sequence1:1645073..1647904(+)	partial			WP_011392283.1	DUF115 domain-containing protein	49.6	72.8	27.1
MGA_1311	LOCUS_13100	sequence1:1656097..1657347(-)	partial			WP_011389138.1	two-component system sensor histidine kinase AtoS	84.1	54.1	35.3
MGA_1335	LOCUS_13340	sequence1:1689454..1691316(+)	partial			WP_010883350.1	type III secretion system inner membrane ring subunit SctD	91.1	65.8	37.4
MGA_1344	LOCUS_13430	sequence1:1697735..1699072(+)	partial			WP_010883342.1	type III secretion system cytoplasmic ring protein SctQ	63.1	77.9	23.4
MGA_1346	LOCUS_13450	sequence1:1701442..1701822(+)	frameshift		1701430	WP_164920657.1	IS5-like element ISTel4 family transposase	100.0	49.4	71.4
MGA_1349	LOCUS_13480	sequence1:1702662..1703534(-)	partial			WP_002287693.1	hypothetical protein	35.5	35.7	42.9
MGA_1357	LOCUS_13560	sequence1:1709016..1709315(-)	partial			WP_002669605.1	hypothetical protein	78.8	63.9	33.3
MGA_1362	LOCUS_13610	sequence1:1716511..1717338(+)	partial			WP_002295743.1	IS982-like element ISEfm1 family transposase	59.6	53.3	28.9
MGA_1369	LOCUS_13680	sequence1:1720419..1721723(+)	partial			WP_011331475.1	TraB/VirB10 family protein	49.1	52.8	36.0
MGA_1370	LOCUS_13690	sequence1:1722549..1722959(-)	frameshift		1722554	WP_010946555.1	IS4-like element ISLpn9 family transposase	98.5	37.1	40.9
MGA_1379	LOCUS_13780	sequence1:1730176..1730730(+)	partial			WP_013087216.1	type-F conjugative transfer system mating-pair stabilization protein TraN	84.2	25.2	32.7
MGA_1388	LOCUS_13870	sequence1:1738983..1739795(+)	frameshift		1738881	WP_014498593.1	PDDEXK nuclease domain-containing protein	89.3	53.5	53.1
MGA_1396	LOCUS_13950	sequence1:1747376..1752976(-)	partial			WP_010933192.1	leucine-rich repeat domain-containing protein	16.3	22.1	34.9
MGA_1406	LOCUS_14050	sequence1:1761464..1762291(-)	partial			WP_002295743.1	IS982-like element ISEfm1 family transposase	59.6	53.3	28.9
MGA_1412	LOCUS_14110	sequence1:1766969..1767430(+)	frameshift		1767409	WP_001138014.1	Tn3-like element TnAs1 family transposase	81.0	12.6	59.7
MGA_1413	LOCUS_14120	sequence1:1767423..1767785(+)	frameshift,internal_stop_codon	1767783..1767785(+)	1767409	WP_001138064.1	Tn3-like element TnAs3 family transposase	97.5	12.2	71.1
MGA_1417	LOCUS_14160	sequence1:1769555..1772506(+)	partial			WP_009873286.1	type III secretion system protein CdsC	23.8	25.6	40.7
MGA_1424	LOCUS_14230	sequence1:1780311..1784081(-)	partial			WP_009873895.1	DEAD/DEAH box helicase	72.1	73.9	37.0
MGA_1433	LOCUS_14320	sequence1:1800019..1801707(+)	partial			WP_011388592.1	leucine-rich repeat domain-containing protein	39.7	21.8	32.4
MGA_1439	LOCUS_14380	sequence1:1810233..1811036(-)	partial			WP_000755440.1	C40 family peptidase	85.0	70.9	27.8
MGA_1446	LOCUS_14450	sequence1:1819696..1821669(+)	partial			WP_011388592.1	leucine-rich repeat domain-containing protein	37.1	22.3	31.2
MGA_1449	LOCUS_14470	sequence1:1822985..1824997(+)	partial			WP_010966554.1	leucine-rich repeat domain-containing protein	47.6	35.6	31.8
MGA_1454	LOCUS_14520	sequence1:1834327..1834572(+)	frameshift		1834304	WP_016361985.1	IS982 family transposase	85.2	23.2	63.8
MGA_1455	LOCUS_14530	sequence1:1835157..1837541(+)	partial			WP_011860869.1	50S ribosome-binding GTPase	61.1	24.9	24.3
MGA_1461	LOCUS_14590	sequence1:1849396..1850253(-)	frameshift		1850432	WP_000411484.1	AI-2E family transporter	94.4	73.7	32.9
MGA_1478	LOCUS_14760	sequence1:1870051..1870449(-)	partial			WP_009872119.1	preprotein translocase subunit YajC	68.2	78.1	53.3
MGA_1480	LOCUS_14780	sequence1:1872108..1872503(-)	partial			WP_010883521.1	histone H1-like protein HC1	44.3	47.2	63.8
MGA_1487	LOCUS_14840	sequence1:1884653..1885489(+)	partial			WP_011120910.1	fasciclin domain-containing protein	44.6	77.4	36.2
MGA_1517	LOCUS_15140	sequence1:1926025..1926258(-)	partial			WP_010892199.1	hypothetical protein	64.9	82.0	50.0
MGA_1518	LOCUS_15150	sequence1:1927687..1929048(-)	partial			WP_010942727.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	70.0	65.9	43.0
MGA_1531	LOCUS_15280	sequence1:1939606..1940229(+)	partial			WP_115892548.1	thioredoxin family protein	50.7	62.7	33.3
MGA_1534	LOCUS_15310	sequence1:1944656..1944958(-)	partial			WP_009873403.1	ribonuclease P protein component	68.0	55.0	47.1
MGA_1541	LOCUS_15380	sequence1:1948779..1953563(-)	partial			WP_010933192.1	leucine-rich repeat domain-containing protein	15.7	18.8	33.2
MGA_1542	LOCUS_15390	sequence1:1954472..1955983(+)	partial			WP_000089239.1	ankyrin repeat domain-containing protein	29.0	37.1	32.9
MGA_1550	LOCUS_15470	sequence1:1967453..1968001(+)	partial			WP_010883622.1	transcription antitermination factor NusB	73.6	83.8	37.3
MGA_1559	LOCUS_15560	sequence1:1976104..1977384(+)	partial			WP_009873488.1	hypothetical protein	64.1	64.8	36.2
MGA_1563	LOCUS_15600	sequence1:1983355..1983807(+)	partial			WP_096001767.1	IS630 family transposase	86.7	49.6	38.5
MGA_1565	LOCUS_15620	sequence1:1984481..1989082(-)	partial			WP_011030349.1	FxSxx-COOH system tetratricopeptide repeat protein	22.1	37.6	28.0
MGA_1566	LOCUS_15630	sequence1:1989673..1989963(+)	frameshift,internal_stop_codon	1989972..1989974(+),1989624..1989626(+),1989491..1989493(+),1989963..1989965(+)	1989674,1989580,1989421,1990007	WP_016361985.1	IS982 family transposase	99.0	29.6	40.2
MGA_1575	LOCUS_15720	sequence1:2007403..2007702(+)	frameshift,internal_stop_codon	2007138..2007140(+),2007363..2007365(+)	2007266,2007477,2007242,2007452,2007663	WP_009936644.1	IS3 family transposase	86.9	32.7	46.7
MGA_1584	LOCUS_15810	sequence1:2023873..2024763(-)	partial			WP_010946906.1	Dot/Icm type IV secretion system effector LidL	62.8	37.0	33.9
MGA_1586	LOCUS_15830	sequence1:2027047..2027379(-)	frameshift,internal_stop_codon	2027046..2027048(-),2026758..2026760(-)	2026949,2027324,2027021,2026925	WP_016361985.1	IS982 family transposase	83.6	31.6	40.4
MGA_1612	LOCUS_16090	sequence1:2048541..2049368(-)	partial			WP_002295743.1	IS982-like element ISEfm1 family transposase	59.6	53.3	28.9
MGA_1621	LOCUS_16180	sequence1:2060391..2061044(+)	partial			WP_012583255.1	sugar transferase	92.6	43.0	54.2
MGA_1670	LOCUS_16670	sequence1:2115594..2119451(+)	partial			WP_012545562.1	translocation/assembly module TamB domain-containing protein	28.4	27.4	20.5
MGA_1711	LOCUS_17070	sequence1:2173147..2174175(+)	partial			WP_164926799.1	Ppx/GppA phosphatase family protein	57.3	59.1	27.4
MGA_1713	LOCUS_17090	sequence1:2175292..2175819(-)	partial			WP_010883173.1	signal peptidase II	74.9	76.2	40.6
MGA_1720	LOCUS_17160	sequence1:2181389..2181835(+)	partial			WP_034855332.1	Hsp20/alpha crystallin family protein	73.0	57.8	34.2
MGA_1728	LOCUS_17240	sequence1:2190091..2191182(-)	partial			WP_005769896.1	Dot/Icm type IV secretion system effector CoxFIC1	73.8	75.3	34.8
MGA_1733	LOCUS_17290	sequence1:2197783..2197941(-)	frameshift,internal_stop_codon	2198098..2198100(-),2198146..2198148(-)	2197706,2197788,2197570	WP_005783643.1	methionine adenosyltransferase	98.1	11.9	68.6
MGA_1749	LOCUS_17450	sequence1:2217799..2218320(+)	partial			WP_154235330.1	bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada	92.5	44.7	56.2
MGA_1750	LOCUS_17460	sequence1:2218379..2219014(-)	partial			WP_028154436.1	hypothetical protein	20.4	43.0	79.1
MGA_1763	LOCUS_17590	sequence1:2234740..2236149(+)	partial			WP_010883419.1	Tol-Pal system protein TolB	71.6	75.6	42.1
MGA_1764	LOCUS_17600	sequence1:2236451..2237191(+)	partial			WP_009871967.1	OmpA family protein	44.7	58.5	50.9
MGA_1781	LOCUS_17770	sequence1:2251891..2252661(+)	partial			WP_009873525.1	peptidoglycan editing factor PgeF	62.9	65.8	44.7
MGA_1830	LOCUS_18260	sequence1:2301050..2303113(+)	partial			WP_011388592.1	leucine-rich repeat domain-containing protein	46.0	26.4	32.3
MGA_1833	LOCUS_18290	sequence1:2305160..2305408(-)	internal_stop_codon	2305472..2305474(-)		WP_010044806.1	site-specific integrase	100.0	24.4	42.4
MGA_1834	LOCUS_18300	sequence1:2306400..2308160(-)	partial			WP_010966553.1	leucine-rich repeat domain-containing protein	58.9	39.1	28.3
MGA_1848	LOCUS_18440	sequence1:2322365..2322724(-)	partial			WP_038093611.1	site-specific integrase	99.2	37.0	52.1
MGA_1855	LOCUS_18510	sequence1:2328064..2329194(-)	partial			WP_002287693.1	hypothetical protein	26.6	34.7	42.2
MGA_1857	LOCUS_18530	sequence1:2331030..2331329(-)	partial			WP_002669605.1	hypothetical protein	55.6	45.1	40.0
MGA_1868	LOCUS_18640	sequence1:2346324..2348540(-)	partial			WP_011388592.1	leucine-rich repeat domain-containing protein	42.8	26.4	38.6
MGA_1872	LOCUS_18680	sequence1:2357614..2359074(-)	partial			WP_005766322.1	M4 family metallopeptidase	25.5	37.9	31.6
MGA_1873	LOCUS_18690	sequence1:2359277..2359429(+)	frameshift,internal_stop_codon	2359434..2359436(+),2359488..2359490(+),2359536..2359538(+)	2359420	WP_038802333.1	IS3-like element IS407 family transposase	96.0	12.9	54.2
MGA_1877	LOCUS_18730	sequence1:2363397..2363774(+)	frameshift		2363732	WP_103153860.1	IS3 family transposase	86.4	26.8	48.1
MGA_1878	LOCUS_18740	sequence1:2363789..2364601(+)	frameshift		2363720	WP_155887481.1	IS3 family transposase	99.6	65.4	54.4
MGA_1879	LOCUS_18750	sequence1:2365140..2366120(-)	partial			WP_003400558.1	M4 family metallopeptidase	73.0	74.4	27.6
MGA_1880	LOCUS_18760	sequence1:2366570..2370394(-)	partial			WP_011015770.1	AAA family ATPase	22.9	80.2	24.3
MGA_1882	LOCUS_18780	sequence1:2373232..2374533(+)	partial			WP_011969421.1	alpha/beta fold hydrolase	24.2	26.3	30.1
MGA_1884	LOCUS_18800	sequence1:2375959..2378025(+)	partial			WP_011144339.1	NB-ARC domain-containing protein	62.2	36.8	31.2
MGA_1889	LOCUS_18850	sequence1:2381151..2382461(-)	partial			WP_011963294.1	cytochrome-c oxidase, cbb3-type subunit I	36.2	21.5	33.1
MGA_1892	LOCUS_18880	sequence1:2385367..2385972(+)	partial			WP_003114949.1	HD domain-containing protein	64.2	68.8	31.3
MGA_1895	LOCUS_18910	sequence1:2388124..2390478(-)	partial			WP_003243517.1	poly(glycerol-phosphate) alpha-glucosyltransferase	25.8	29.6	23.2
MGA_1897	LOCUS_18930	sequence1:2392515..2393243(-)	partial			WP_010903274.1	DUF2071 domain-containing protein	74.8	80.8	29.9
MGA_1914	LOCUS_19100	sequence1:2409883..2410668(-)	partial			WP_004080009.1	HAD family phosphatase	72.4	82.4	29.9
MGA_1926	LOCUS_19220	sequence1:2420127..2420327(+)	internal_stop_codon	2420325..2420327(+)		WP_005769896.1	Dot/Icm type IV secretion system effector CoxFIC1	97.0	18.4	81.2
MGA_1927	LOCUS_19230	sequence1:2420520..2421737(-)	partial			WP_000281021.1	AAA family ATPase	86.9	41.6	24.4
MGA_1929	LOCUS_19250	sequence1:2423302..2426190(+)	partial			WP_016523138.1	leucine-rich repeat domain-containing protein	55.2	50.8	22.5
MGA_1932	LOCUS_19280	sequence1:2429373..2430824(-)	partial			WP_011251161.1	DNA double-strand break repair ATPase Rad50	80.1	47.6	26.5
