# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_97	LOCUS_00960	sequence1:114701..116887(+)	frameshift		116833	WP_000147554.1	DNA-directed RNA polymerase subunit beta	97.7	60.4	97.9
MGA_98	LOCUS_00970	sequence1:116938..118233(+)	frameshift		116836	WP_000147554.1	DNA-directed RNA polymerase subunit beta	100.0	36.6	98.4
MGA_161	LOCUS_01600	sequence1:171059..171772(+)	partial			WP_012545002.1	Mrp/NBP35 family ATP-binding protein	79.3	68.6	46.4
MGA_164	LOCUS_01630	sequence1:173534..174778(+)	partial			WP_002263541.1	ATP-grasp domain-containing protein	58.9	61.7	24.8
MGA_168	LOCUS_01670	sequence1:179614..179901(+)	frameshift		179600	WP_149238867.1	MerR family transcriptional regulator	58.9	21.7	46.4
MGA_173	LOCUS_01720	sequence1:183701..184513(+)	partial			WP_000180345.1	SUMF1/EgtB/PvdO family nonheme iron enzyme	64.4	85.0	30.3
MGA_178	LOCUS_01770	sequence1:187263..188498(+)	partial			WP_226568670.1	ATP-grasp domain-containing protein	42.8	43.8	24.7
MGA_179	LOCUS_01780	sequence1:188516..189247(+)	partial			WP_003120269.1	molybdopterin-synthase adenylyltransferase MoeB	92.6	58.7	43.0
MGA_180	LOCUS_01790	sequence1:189388..189753(+)	internal_stop_codon	189751..189753(+)		WP_005417964.1	L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha	99.2	28.7	32.0
MGA_181	LOCUS_01800	sequence1:189763..189966(+)	internal_stop_codon	189751..189753(+)		WP_013098874.1	serine dehydratase subunit alpha family protein	71.6	11.1	66.7
MGA_182	LOCUS_01810	sequence1:189908..190075(-)	partial			WP_055164393.1	IS30 family transposase	87.3	15.3	62.5
MGA_186	LOCUS_01850	sequence1:192889..193062(+)	internal_stop_codon	193060..193062(+)		WP_042874184.1	DUF3981 domain-containing protein	100.0	10.5	66.7
MGA_187	LOCUS_01860	sequence1:193138..194601(+)	internal_stop_codon	193060..193062(+)		WP_042874184.1	DUF3981 domain-containing protein	99.6	84.6	88.2
MGA_196	LOCUS_01950	sequence1:203151..203492(+)	frameshift		203459	WP_000544219.1	AraC family transcriptional regulator	99.1	37.5	69.6
MGA_197	LOCUS_01960	sequence1:203510..204049(+)	frameshift		203459	WP_000544202.1	AraC family transcriptional regulator	99.4	59.5	80.9
MGA_216	LOCUS_02150	sequence1:222648..222959(+)	internal_stop_codon	222957..222959(+),222417..222419(+),222459..222461(+),223008..223010(+)		WP_000871089.1	TatD family hydrolase	100.0	39.6	70.9
MGA_263	LOCUS_02610	sequence1:289991..290230(-)	partial			WP_003732167.1	ASCH domain-containing protein	94.9	49.0	53.3
MGA_264	LOCUS_02620	sequence1:290685..290849(-)	frameshift,internal_stop_codon	290985..290987(-),290684..290686(-)	290578,290924,290908	WP_001280036.1	undecaprenyl-diphosphate phosphatase UppP	100.0	20.4	85.2
MGA_297	LOCUS_02950	sequence1:339414..339611(-)	frameshift		339228	WP_011181452.1	ArsA family ATPase	92.3	15.3	83.3
MGA_319	LOCUS_03170	sequence1:363577..363825(+)	partial			WP_000033222.1	S-methyl-5-thioribose kinase	95.1	23.2	48.5
MGA_320	LOCUS_03180	sequence1:364783..364935(+)	internal_stop_codon	364933..364935(+),364960..364962(+)		WP_028402271.1	IS6 family transposase	100.0	34.7	72.0
MGA_338	LOCUS_03360	sequence1:380467..381156(+)	internal_stop_codon	381154..381156(+)		WP_001046103.1	ATP-binding protein	99.6	55.9	72.4
MGA_339	LOCUS_03370	sequence1:381175..381693(+)	internal_stop_codon	381154..381156(+)		WP_001046103.1	ATP-binding protein	99.4	41.9	66.7
MGA_343	LOCUS_03410	sequence1:382767..382949(+)	internal_stop_codon	382947..382949(+)		WP_011861238.1	IS200/IS605 family element RNA-guided endonuclease TnpB	96.7	15.6	60.3
MGA_398	LOCUS_03960	sequence1:448045..448713(-)	frameshift		448697	WP_000073726.1	cation-translocating P-type ATPase	96.4	24.4	82.9
MGA_399	LOCUS_03970	sequence1:448644..448880(-)	frameshift		448697	WP_000073726.1	cation-translocating P-type ATPase	100.0	8.8	73.1
MGA_421	LOCUS_04190	sequence1:470035..471651(+)	partial			WP_010989680.1	LPXTG cell wall anchor domain-containing protein	83.6	55.2	58.0
MGA_430	LOCUS_04280	sequence1:475097..476125(+)	partial			WP_011861938.1	recombinase family protein	69.6	40.8	81.2
MGA_454	LOCUS_04520	sequence1:498717..499013(+)	internal_stop_codon	499011..499013(+)		WP_003228085.1	metallophosphoesterase	100.0	7.6	55.1
MGA_472	LOCUS_04690	sequence1:522164..522586(+)	internal_stop_codon	522584..522586(+)		WP_048566937.1	T7SS effector LXG polymorphic toxin	99.3	25.5	87.1
MGA_474	LOCUS_04710	sequence1:523141..523326(+)	partial			WP_001060032.1	SMI1/KNR4 family protein	91.8	37.1	80.4
MGA_504	LOCUS_05010	sequence1:556947..557540(+)	partial			WP_000141796.1	alpha/beta hydrolase	92.4	54.6	28.8
MGA_530	LOCUS_05270	sequence1:592456..592626(+)	frameshift		592608,592669	WP_000349636.1	metal-sensing transcriptional repressor	94.6	53.0	54.7
MGA_549	LOCUS_05460	sequence1:615827..616429(+)	internal_stop_codon	616427..616429(+)		WP_000401673.1	phosphotransferase	100.0	61.9	62.5
MGA_550	LOCUS_05470	sequence1:616553..616798(+)	internal_stop_codon	616427..616429(+)		WP_000401673.1	phosphotransferase	98.8	24.8	72.5
MGA_592	LOCUS_05890	sequence1:659849..660088(-)	frameshift,internal_stop_codon	660209..660211(-)	659875,659811	WP_000443134.1	peptide MFS transporter	89.9	15.4	84.5
MGA_593	LOCUS_05900	sequence1:660398..660538(-)	internal_stop_codon	660209..660211(-)		WP_000443143.1	peptide MFS transporter	91.3	9.1	71.4
MGA_626	LOCUS_06220	sequence1:703145..703402(+)	frameshift		703387	WP_011861290.1	IS200/IS605 family element RNA-guided endonuclease TnpB	96.5	22.0	59.8
MGA_685	LOCUS_06810	sequence1:758725..759300(+)	frameshift,internal_stop_codon	758647..758649(+),759232..759234(+)	759162	WP_000284571.1	IS1182-like element IS1182 family transposase	92.7	34.3	43.5
MGA_687	LOCUS_06830	sequence1:760081..762396(-)	partial			WP_000758930.1	S-layer protein	34.2	79.5	28.4
MGA_689	LOCUS_06850	sequence1:764262..764480(-)	partial			WP_000725032.1	DUF3139 domain-containing protein	100.0	64.1	49.3
MGA_690	LOCUS_06860	sequence1:764814..765206(-)	internal_stop_codon	765243..765245(-)		WP_099686814.1	IS1182 family transposase	99.2	24.9	55.8
MGA_711	LOCUS_07070	sequence1:789249..791831(+)	partial			WP_010989523.1	hypothetical protein	24.9	26.2	32.1
MGA_719	LOCUS_07150	sequence1:801272..803389(+)	partial			WP_010714416.1	collagen-binding MSCRAMM adhesin Ace	72.9	78.5	28.2
MGA_728	LOCUS_07240	sequence1:815417..817840(+)	partial			WP_000791600.1	N-acetylmuramoyl-L-alanine amidase	24.2	47.3	49.7
MGA_729	LOCUS_07250	sequence1:818559..821198(+)	partial			WP_000791600.1	N-acetylmuramoyl-L-alanine amidase	22.2	47.1	51.3
MGA_744	LOCUS_07400	sequence1:841379..841735(+)	frameshift		841331	WP_000403325.1	SMI1/KNR4 family protein	97.5	73.7	57.4
MGA_748	LOCUS_07440	sequence1:845305..846303(+)	frameshift		846279	WP_000382737.1	hypothetical protein	100.0	56.0	62.9
MGA_752	LOCUS_07480	sequence1:849182..850195(+)	frameshift		850174	WP_000551899.1	IS110 family transposase	98.2	80.5	92.7
MGA_753	LOCUS_07490	sequence1:850140..850409(+)	frameshift		850174	WP_000551899.1	IS110 family transposase	98.9	21.7	86.5
MGA_754	LOCUS_07500	sequence1:850548..850943(+)	partial			WP_010963656.1	AHH domain-containing protein	81.7	13.6	65.4
MGA_756	LOCUS_07520	sequence1:852163..852459(+)	partial			WP_000504233.1	recombinase family protein	81.6	30.8	95.0
MGA_757	LOCUS_07530	sequence1:852578..853018(+)	frameshift		852440,852995	WP_000382737.1	hypothetical protein	99.3	24.6	63.5
MGA_758	LOCUS_07540	sequence1:853042..853470(+)	frameshift		852994	WP_000382737.1	hypothetical protein	78.2	15.9	32.8
MGA_759	LOCUS_07550	sequence1:853409..853696(+)	frameshift		853428	WP_011837031.1	hypothetical protein	85.3	11.5	49.4
MGA_764	LOCUS_07600	sequence1:856993..857352(-)	partial			WP_000035820.1	MFS transporter	69.7	24.0	57.5
MGA_773	LOCUS_07690	sequence1:864428..864874(-)	frameshift,internal_stop_codon	864885..864887(-),864876..864878(-)	864848,864815	WP_115270946.1	IS110 family transposase	82.4	30.5	37.7
MGA_774	LOCUS_07700	sequence1:864885..865181(-)	frameshift,internal_stop_codon	864885..864887(-),864876..864878(-),865284..865286(-)	864848,865325,864815	WP_162038636.1	IS110 family transposase	100.0	24.0	32.0
MGA_781	LOCUS_07770	sequence1:872134..872946(+)	internal_stop_codon	871894..871896(+),871975..871977(+)		WP_053435486.1	IS4 family transposase	100.0	60.7	42.6
MGA_795	LOCUS_07910	sequence1:886659..886901(+)	internal_stop_codon	886899..886901(+)		WP_000312067.1	DnaD domain protein	56.2	15.7	82.2
MGA_796	LOCUS_07920	sequence1:886986..887177(+)	frameshift		886977,887154	WP_000027355.1	replicative DNA helicase	88.9	13.1	75.0
MGA_797	LOCUS_07930	sequence1:887216..887365(+)	frameshift		886977,887154	WP_000027306.1	replicative DNA helicase	100.0	11.4	71.4
MGA_814	LOCUS_08100	sequence1:904534..904893(+)	frameshift,internal_stop_codon	904517..904519(+)	904531	WP_002002236.1	hypothetical protein	99.2	83.7	84.7
MGA_822	LOCUS_08180	sequence1:913730..913900(-)	frameshift,internal_stop_codon	913730..913732(-)	913910	WP_099686814.1	IS1182 family transposase	92.9	10.0	55.8
MGA_843	LOCUS_08390	sequence1:933906..934043(+)	partial			WP_001072551.1	ring-cleaving dioxygenase	100.0	13.8	86.7
MGA_854	LOCUS_08500	sequence1:947009..947194(+)	frameshift,internal_stop_codon	947192..947194(+)	947215	WP_000184510.1	BlaI/MecI/CopY family transcriptional regulator	90.2	41.4	83.6
MGA_855	LOCUS_08510	sequence1:947211..947405(+)	frameshift,internal_stop_codon	947192..947194(+)	947215	WP_000184510.1	BlaI/MecI/CopY family transcriptional regulator	95.3	48.1	82.8
MGA_856	LOCUS_08520	sequence1:947405..947590(+)	partial			WP_011109891.1	M56 family metallopeptidase	100.0	9.4	62.3
MGA_878	LOCUS_08740	sequence1:968417..969061(+)	frameshift		968384	WP_113304420.1	S-layer homology domain-containing protein	98.6	84.3	67.7
MGA_924	LOCUS_09200	sequence1:1012741..1013208(+)	frameshift		1013187	WP_000727217.1	peptide ABC transporter substrate-binding protein	98.7	27.9	79.2
MGA_925	LOCUS_09210	sequence1:1013216..1014391(+)	frameshift		1013187	WP_000727217.1	peptide ABC transporter substrate-binding protein	99.2	70.4	85.6
MGA_938	LOCUS_09340	sequence1:1027695..1027994(+)	internal_stop_codon	1027992..1027994(+)		WP_000628317.1	competence protein CoiA family protein	93.9	22.0	58.1
MGA_954	LOCUS_09500	sequence1:1042904..1043707(+)	partial			WP_211477963.1	spore coat CotO family protein	56.2	76.7	32.1
MGA_960	LOCUS_09560	sequence1:1048046..1049068(-)	partial			WP_000069738.1	hypothetical protein	40.9	47.6	78.4
MGA_978	LOCUS_09740	sequence1:1065605..1065811(+)	frameshift		1065805	WP_003269846.1	anthranilate synthase component I	89.7	12.9	75.4
MGA_979	LOCUS_09750	sequence1:1066048..1066536(+)	frameshift		1065805	WP_003269846.1	anthranilate synthase component I	42.0	14.4	54.4
MGA_1006	LOCUS_10020	sequence1:1097976..1098245(+)	partial			WP_011460046.1	type IA DNA topoisomerase	98.9	11.5	41.5
MGA_1009	LOCUS_10050	sequence1:1099587..1100471(-)	partial			WP_011458871.1	IS4-like element ISDha3 family transposase	60.2	42.5	40.1
MGA_1011	LOCUS_10070	sequence1:1101277..1101456(+)	partial			WP_011100982.1	pre-toxin TG domain-containing protein	96.6	10.6	53.8
MGA_1014	LOCUS_10100	sequence1:1102160..1102405(-)	partial			WP_170117305.1	ISL3 family transposase	95.1	14.3	39.0
MGA_1016	LOCUS_10120	sequence1:1104185..1104850(-)	internal_stop_codon	1105019..1105021(-)		WP_001039694.1	Gfo/Idh/MocA family oxidoreductase	98.6	70.8	56.9
MGA_1019	LOCUS_10150	sequence1:1105977..1106231(+)	partial			WP_065439155.1	hypothetical protein	91.7	51.7	36.4
MGA_1024	LOCUS_10200	sequence1:1109703..1109909(+)	partial			WP_178940705.1	site-specific integrase	100.0	18.4	97.1
MGA_1045	LOCUS_10410	sequence1:1131533..1131919(+)	partial			WP_000599004.1	DUF1648 domain-containing protein	94.5	61.5	55.6
MGA_1058	LOCUS_10540	sequence1:1146599..1147198(-)	frameshift,internal_stop_codon	1147309..1147311(-)	1147266	WP_081133701.1	IS256-like element ISEfm2 family transposase	68.3	40.6	47.8
MGA_1061	LOCUS_10570	sequence1:1148921..1149997(+)	frameshift		1149947,1148870	WP_003243737.1	serine hydrolase	96.6	76.9	37.4
MGA_1105	LOCUS_11010	sequence1:1186607..1187308(+)	partial			WP_001215838.1	class 1b ribonucleoside-diphosphate reductase subunit alpha	100.0	33.6	93.6
MGA_1106	LOCUS_11020	sequence1:1187862..1189250(+)	partial			WP_001215839.1	class 1b ribonucleoside-diphosphate reductase subunit alpha	99.8	66.4	97.2
MGA_1116	LOCUS_11120	sequence1:1196604..1197035(+)	frameshift,internal_stop_codon	1196585..1196587(+)	1196596	WP_142237750.1	carboxymuconolactone decarboxylase family protein	94.4	82.8	89.6
MGA_1159	LOCUS_11550	sequence1:1241424..1241597(+)	frameshift		1241404	WP_000170323.1	ATP phosphoribosyltransferase regulatory subunit	94.7	12.9	64.8
MGA_1205	LOCUS_12010	sequence1:1285881..1286207(-)	internal_stop_codon	1285881..1285883(-)		WP_094396572.1	IS3 family transposase	100.0	24.3	55.6
MGA_1373	LOCUS_13690	sequence1:1441752..1441919(+)	frameshift		1441729,1441711	WP_002080856.1	aspartyl-phosphate phosphatase Spo0E family protein	85.5	65.3	70.2
MGA_1408	LOCUS_14040	sequence1:1473704..1475773(+)	partial			WP_001023718.1	glycosyltransferase family 4 protein	35.4	69.4	26.0
MGA_1429	LOCUS_14250	sequence1:1493808..1494365(+)	partial			WP_003975467.1	TetR family transcriptional regulator	40.0	37.9	35.1
MGA_1442	LOCUS_14380	sequence1:1504719..1505594(+)	partial			WP_127064234.1	glycosyltransferase	86.6	32.0	54.4
MGA_1485	LOCUS_14810	sequence1:1553491..1553679(+)	partial			WP_000581656.1	response regulator transcription factor	95.2	24.6	54.2
MGA_1487	LOCUS_14830	sequence1:1554195..1554647(+)	frameshift,internal_stop_codon	1554114..1554116(+)	1554629	WP_082232609.1	HAMP domain-containing sensor histidine kinase	91.3	30.5	51.1
MGA_1490	LOCUS_14860	sequence1:1557755..1560295(+)	partial			WP_011070541.1	molybdopterin-synthase adenylyltransferase MoeB	14.8	47.8	28.0
MGA_1498	LOCUS_14940	sequence1:1568548..1568883(+)	partial			WP_000265696.1	M23 family metallopeptidase	82.0	31.8	72.5
MGA_1515	LOCUS_15110	sequence1:1588096..1588932(+)	partial			WP_011108234.1	helix-turn-helix domain-containing protein	74.1	76.0	32.2
MGA_1527	LOCUS_15230	sequence1:1599436..1600152(-)	partial			WP_002182762.1	4'-phosphopantetheinyl transferase superfamily protein	73.9	84.1	39.5
MGA_1542	LOCUS_15380	sequence1:1613838..1614401(-)	frameshift		1614591	WP_000686827.1	patatin-like phospholipase family protein	99.5	57.9	80.6
MGA_1543	LOCUS_15390	sequence1:1614580..1614804(-)	frameshift		1614591	WP_000686815.1	patatin-like phospholipase family protein	95.9	22.1	73.2
MGA_1546	LOCUS_15420	sequence1:1615436..1615993(+)	frameshift,internal_stop_codon	1615333..1615335(+)	1615987	WP_001034844.1	YwqG family protein	84.3	62.4	63.5
MGA_1600	LOCUS_15960	sequence1:1665931..1666359(+)	frameshift,internal_stop_codon	1665920..1665922(+),1665812..1665814(+)	1665784	WP_001166435.1	histidine phosphatase family protein	97.9	70.9	77.0
MGA_1620	LOCUS_16160	sequence1:1691270..1691539(+)	frameshift		1691488	WP_000267105.1	hypothetical protein	80.9	27.7	70.8
MGA_1621	LOCUS_16170	sequence1:1691589..1691729(+)	frameshift		1691494	WP_000267150.1	hypothetical protein	95.7	16.9	84.1
MGA_1623	LOCUS_16190	sequence1:1692924..1693301(+)	partial			WP_000768467.1	DUF3952 domain-containing protein	99.2	46.6	73.4
MGA_1705	LOCUS_17010	sequence1:1773398..1773751(+)	frameshift,internal_stop_codon	1773182..1773184(+)	1773703	WP_001275517.1	MFS transporter	88.0	25.2	75.7
MGA_1706	LOCUS_17020	sequence1:1773745..1773975(+)	frameshift		1773703	WP_000097166.1	MFS transporter	100.0	19.8	58.5
MGA_1718	LOCUS_17140	sequence1:1787046..1787795(-)	partial			WP_012257289.1	DUF4397 domain-containing protein	73.9	71.4	32.1
MGA_1728	LOCUS_17240	sequence1:1797422..1797586(+)	partial			WP_000101489.1	hypothetical protein	74.1	16.8	77.5
MGA_1741	LOCUS_17370	sequence1:1805359..1805511(-)	frameshift		1805623	WP_000880558.1	site-specific integrase	100.0	41.7	92.0
MGA_1745	LOCUS_17410	sequence1:1807896..1809512(-)	partial			WP_062822548.1	collagen-like repeat preface domain-containing protein	58.0	49.0	84.2
MGA_1760	LOCUS_17560	sequence1:1824545..1825876(+)	internal_stop_codon	1825874..1825876(+)		WP_000689198.1	peptidase	97.3	69.5	65.2
MGA_1761	LOCUS_17570	sequence1:1826003..1826419(+)	internal_stop_codon	1825874..1825876(+)		WP_000689198.1	peptidase	100.0	21.7	56.5
MGA_1772	LOCUS_17680	sequence1:1840867..1841304(+)	frameshift,internal_stop_codon	1841302..1841304(+)	1841370	WP_000422016.1	methyl-accepting chemotaxis protein	71.0	18.7	52.3
MGA_1785	LOCUS_17810	sequence1:1855898..1857046(+)	partial			WP_002352315.1	mutanobactin A non-ribosomal peptide synthetase MubC	92.9	22.7	35.4
MGA_1824	LOCUS_18200	sequence1:1900489..1901022(-)	partial			WP_002222147.1	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	95.5	23.5	40.8
MGA_1855	LOCUS_18510	sequence1:1930738..1930875(+)	internal_stop_codon	1930961..1930963(+)		WP_003243530.1	flavin reductase family protein	77.8	16.9	74.3
MGA_1861	LOCUS_18570	sequence1:1935782..1936030(+)	internal_stop_codon	1935644..1935646(+)		WP_043321894.1	DUF3885 domain-containing protein	100.0	40.2	63.3
MGA_1864	LOCUS_18600	sequence1:1936903..1937286(+)	frameshift		1937273,1937002,1936891,1937051	WP_000446319.1	SDR family oxidoreductase	98.4	59.7	60.3
MGA_1876	LOCUS_18720	sequence1:1947668..1948051(+)	internal_stop_codon	1948049..1948051(+)		WP_011140814.1	cation:proton antiporter	88.2	15.1	41.4
MGA_1878	LOCUS_18740	sequence1:1948691..1948954(+)	partial			WP_011037764.1	cation:proton antiporter	62.1	12.8	63.0
MGA_1880	LOCUS_18760	sequence1:1950177..1950944(+)	partial			WP_011141949.1	4'-phosphopantetheinyl transferase superfamily protein	63.5	63.5	30.7
MGA_1881	LOCUS_18770	sequence1:1951172..1951387(+)	frameshift		1951528,1951354	WP_088792927.1	IS3-like element IS981 family transposase	94.4	18.6	39.1
MGA_1886	LOCUS_18820	sequence1:1953363..1953917(+)	partial			WP_010921011.1	SDR family oxidoreductase	97.3	64.4	44.1
MGA_1903	LOCUS_18990	sequence1:1971025..1971237(-)	partial			WP_000428151.1	NUDIX domain-containing protein	94.3	44.6	39.4
MGA_1907	LOCUS_19030	sequence1:1975313..1975510(-)	partial			WP_001071364.1	heterocycloanthracin/sonorensin family bacteriocin	60.0	36.8	76.9
MGA_1908	LOCUS_19040	sequence1:1975844..1976086(-)	partial			WP_048065742.1	GrpB family protein	83.8	38.5	53.7
MGA_1939	LOCUS_19350	sequence1:2008443..2009147(-)	partial			WP_001087134.1	solute:sodium symporter family transporter	98.3	40.3	46.3
MGA_1960	LOCUS_19560	sequence1:2025383..2025571(+)	frameshift		2025329,2025363,2025727,2025541,2025775	WP_000364539.1	ribose 5-phosphate isomerase A	82.3	23.2	64.7
MGA_1961	LOCUS_19570	sequence1:2025595..2025768(+)	frameshift		2025329,2025363,2025727,2025541,2025775	WP_000364539.1	ribose 5-phosphate isomerase A	80.7	20.9	71.7
MGA_1963	LOCUS_19590	sequence1:2026777..2027052(-)	frameshift		2026872,2027134	WP_000680407.1	GNAT family N-acetyltransferase	72.5	47.8	77.3
MGA_1964	LOCUS_19600	sequence1:2027045..2027251(-)	frameshift		2026872,2027134	WP_000680407.1	GNAT family N-acetyltransferase	69.1	34.1	59.6
MGA_1985	LOCUS_19810	sequence1:2043231..2043461(-)	internal_stop_codon	2043582..2043584(-)		WP_001101141.1	GNAT family N-acetyltransferase	96.1	41.7	43.8
MGA_1986	LOCUS_19820	sequence1:2043582..2043740(-)	internal_stop_codon	2043582..2043584(-)		WP_000461346.1	GNAT family N-acetyltransferase	96.2	28.6	54.0
MGA_1996	LOCUS_19920	sequence1:2050231..2051454(-)	frameshift		2050320	WP_011023699.1	transposase	29.0	47.3	31.4
MGA_1999	LOCUS_19950	sequence1:2052984..2053298(-)	partial			WP_003243055.1	zinc metalloprotease LiaK	91.3	37.7	45.3
MGA_2001	LOCUS_19970	sequence1:2053669..2054484(+)	frameshift		2053591	WP_128721742.1	IS3 family transposase	98.5	71.2	56.9
MGA_2012	LOCUS_20080	sequence1:2062726..2063223(-)	frameshift		2063346,2063154	WP_000716613.1	serine hydrolase domain-containing protein	87.3	36.9	73.6
MGA_2013	LOCUS_20090	sequence1:2063105..2063341(-)	frameshift		2063352,2063154	WP_000845175.1	serine hydrolase domain-containing protein	79.5	17.0	87.9
MGA_2014	LOCUS_20100	sequence1:2063326..2063592(-)	frameshift,internal_stop_codon	2063634..2063636(-)	2063705,2063153,2063351	WP_000716613.1	serine hydrolase domain-containing protein	93.2	21.1	81.7
MGA_2017	LOCUS_20130	sequence1:2065766..2066485(-)	partial			WP_000382737.1	hypothetical protein	64.0	23.9	52.9
MGA_2019	LOCUS_20150	sequence1:2067306..2067821(-)	partial			WP_004399481.1	LXG family T7SS effector ribonuclease toxin YobL	80.7	21.8	44.6
MGA_2020	LOCUS_20160	sequence1:2067787..2067978(-)	partial			WP_000382737.1	hypothetical protein	93.7	9.8	66.1
MGA_2021	LOCUS_20170	sequence1:2068107..2068394(-)	partial			WP_000504233.1	recombinase family protein	88.4	32.3	84.5
MGA_2026	LOCUS_20220	sequence1:2071991..2072725(-)	partial			WP_011837031.1	hypothetical protein	86.9	30.2	50.0
MGA_2030	LOCUS_20260	sequence1:2075424..2075924(-)	frameshift		2075928	WP_000504233.1	recombinase family protein	100.0	63.8	88.6
MGA_2031	LOCUS_20270	sequence1:2075926..2076159(-)	frameshift		2075928	WP_000504233.1	recombinase family protein	100.0	29.6	97.4
MGA_2035	LOCUS_20310	sequence1:2080179..2080385(-)	frameshift		2080489	WP_000609533.1	hypothetical protein	91.2	22.4	64.5
MGA_2036	LOCUS_20320	sequence1:2080487..2080918(-)	frameshift,internal_stop_codon	2080940..2080942(-)	2080492	WP_000609533.1	hypothetical protein	100.0	50.2	58.0
MGA_2039	LOCUS_20350	sequence1:2082205..2082444(-)	internal_stop_codon	2082454..2082456(-)		WP_076629448.1	IS200/IS605 family element RNA-guided endonuclease TnpB	91.1	19.4	65.3
MGA_2040	LOCUS_20360	sequence1:2082454..2083356(-)	internal_stop_codon	2082454..2082456(-)		WP_011861290.1	IS200/IS605 family element RNA-guided endonuclease TnpB	100.0	78.2	49.5
MGA_2063	LOCUS_20590	sequence1:2103282..2104253(-)	internal_stop_codon	2104254..2104256(-)		WP_002287525.1	IS200/IS605 family element RNA-guided endonuclease TnpB	98.1	83.2	53.8
MGA_2064	LOCUS_20600	sequence1:2104254..2104436(-)	internal_stop_codon	2104254..2104256(-)		WP_011861238.1	IS200/IS605 family element RNA-guided endonuclease TnpB	96.7	15.6	60.3
MGA_2080	LOCUS_20760	sequence1:2125163..2125324(-)	partial			WP_000337441.1	DUF2332 domain-containing protein	84.9	12.9	64.4
MGA_2083	LOCUS_20790	sequence1:2126877..2127293(-)	frameshift		2127349	WP_011861768.1	type I-B CRISPR-associated endonuclease Cas1b	100.0	42.3	65.9
MGA_2084	LOCUS_20800	sequence1:2127290..2127859(-)	frameshift		2127349	WP_011861768.1	type I-B CRISPR-associated endonuclease Cas1b	92.6	53.4	46.9
MGA_2094	LOCUS_20900	sequence1:2137759..2137974(-)	internal_stop_codon	2137759..2137761(-)		WP_000106090.1	kinase	100.0	36.8	56.3
MGA_2101	LOCUS_20970	sequence1:2142725..2142952(-)	frameshift,internal_stop_codon	2142514..2142516(-),2142725..2142727(-)	2142586,2142477	WP_000751431.1	serine hydrolase	100.0	15.6	46.7
MGA_2104	LOCUS_21000	sequence1:2144874..2145266(+)	frameshift		2145197	WP_014537666.1	MFS transporter	78.5	23.2	61.8
MGA_2105	LOCUS_21010	sequence1:2145169..2146179(+)	frameshift		2145200	WP_011015489.1	MFS transporter	88.1	68.4	49.0
MGA_2112	LOCUS_21080	sequence1:2151580..2152323(-)	internal_stop_codon	2152468..2152470(-)		WP_000392079.1	aminoglycoside phosphotransferase family protein	97.6	78.0	63.1
MGA_2121	LOCUS_21170	sequence1:2161853..2161981(-)	frameshift		2162015	WP_000593392.1	DUF969 domain-containing protein	100.0	18.2	61.9
MGA_2122	LOCUS_21180	sequence1:2162013..2162549(-)	frameshift		2162021	WP_000239801.1	DUF969 domain-containing protein	100.0	77.1	87.1
MGA_2151	LOCUS_21470	sequence1:2192736..2193014(-)	frameshift,internal_stop_codon	2193076..2193078(-)	2193021	WP_000504233.1	recombinase family protein	100.0	35.4	89.1
MGA_2152	LOCUS_21480	sequence1:2193076..2193327(-)	frameshift,internal_stop_codon	2193076..2193078(-)	2193021	WP_000504233.1	recombinase family protein	100.0	40.0	70.2
MGA_2157	LOCUS_21530	sequence1:2196070..2196273(-)	frameshift		2196373	WP_000382718.1	DNA/RNA non-specific endonuclease	98.5	11.4	68.2
MGA_2158	LOCUS_21540	sequence1:2196365..2197738(-)	partial			WP_000382737.1	hypothetical protein	91.7	70.1	58.3
MGA_2183	LOCUS_21790	sequence1:2216405..2216554(-)	frameshift,internal_stop_codon	2216641..2216643(-),2216833..2216835(-)	2216808	WP_000266027.1	ribonuclease E activity regulator RraA	93.9	28.9	58.7
MGA_2184	LOCUS_21800	sequence1:2216642..2216839(-)	frameshift,internal_stop_codon	2216641..2216643(-),2216833..2216835(-)	2216808	WP_000266027.1	ribonuclease E activity regulator RraA	86.2	35.2	75.0
MGA_2211	LOCUS_22070	sequence1:2239811..2240467(+)	internal_stop_codon	2240465..2240467(+)		WP_081133701.1	IS256-like element ISEfm2 family transposase	100.0	55.6	57.3
MGA_2216	LOCUS_22120	sequence1:2242198..2242485(-)	frameshift		2242200	WP_053435486.1	IS4 family transposase	100.0	20.0	62.1
MGA_2218	LOCUS_22140	sequence1:2243456..2243647(+)	internal_stop_codon	2243645..2243647(+)		WP_235856733.1	ABC transporter ATP-binding protein	93.7	10.3	64.4
MGA_2219	LOCUS_22150	sequence1:2243666..2243902(+)	internal_stop_codon	2243645..2243647(+)		WP_235856733.1	ABC transporter ATP-binding protein	100.0	13.7	80.8
MGA_2224	LOCUS_22200	sequence1:2246523..2247425(-)	partial			WP_011861675.1	UDP-glucose/GDP-mannose dehydrogenase family protein	46.3	32.9	53.5
MGA_2229	LOCUS_22250	sequence1:2249969..2250910(-)	internal_stop_codon	2249969..2249971(-)		WP_164993978.1	IS66 family transposase	92.0	65.9	33.9
MGA_2232	LOCUS_22280	sequence1:2251650..2252081(+)	partial			WP_065439155.1	hypothetical protein	53.8	51.7	36.4
MGA_2233	LOCUS_22290	sequence1:2252141..2252557(+)	frameshift,internal_stop_codon	2252841..2252843(+),2252556..2252558(+)	2252069	WP_094374263.1	IS3 family transposase	100.0	31.5	49.3
MGA_2234	LOCUS_22300	sequence1:2252621..2252842(+)	internal_stop_codon	2252840..2252842(+),2252555..2252557(+)		WP_094374263.1	IS3 family transposase	100.0	16.4	56.2
MGA_2236	LOCUS_22320	sequence1:2253476..2253769(+)	partial			WP_011391832.1	IS21-like element helper ATPase IstB	76.3	29.4	43.2
MGA_2237	LOCUS_22330	sequence1:2254051..2254866(-)	frameshift		2254943	WP_128721742.1	IS3 family transposase	98.5	71.2	56.9
MGA_2244	LOCUS_22400	sequence1:2259409..2259660(+)	partial			WP_003231473.1	site-specific integrase	94.0	58.0	35.2
MGA_2247	LOCUS_22430	sequence1:2260323..2261267(-)	internal_stop_codon	2261406..2261408(-)		WP_000056051.1	ribonuclease	89.8	49.5	38.1
MGA_2248	LOCUS_22440	sequence1:2261406..2261612(-)	internal_stop_codon	2261406..2261408(-)		WP_048566937.1	T7SS effector LXG polymorphic toxin	100.0	12.5	98.5
MGA_2251	LOCUS_22470	sequence1:2262480..2262707(-)	partial			WP_000918603.1	WXG100 family type VII secretion target	84.0	64.3	98.4
MGA_2256	LOCUS_22520	sequence1:2267937..2268512(-)	internal_stop_codon	2268522..2268524(-),2267937..2267939(-)		WP_010966780.1	group II intron reverse transcriptase/maturase	99.5	40.6	59.4
MGA_2257	LOCUS_22530	sequence1:2268522..2268803(-)	frameshift,internal_stop_codon	2268522..2268524(-)	2268859,2268789	WP_010966780.1	group II intron reverse transcriptase/maturase	94.6	18.7	62.5
MGA_2263	LOCUS_22590	sequence1:2272115..2272366(-)	partial			WP_001180591.1	GNAT family N-acetyltransferase	96.4	47.9	77.5
MGA_2268	LOCUS_22640	sequence1:2276669..2276875(-)	frameshift,internal_stop_codon	2276668..2276670(-)	2276862	WP_000428351.1	arsenate reductase (thioredoxin)	95.6	50.0	76.1
MGA_2270	LOCUS_22660	sequence1:2277248..2277421(-)	partial			WP_004399122.1	arsenical resistance operon transcriptional regulator ArsR	63.2	34.3	91.7
MGA_2275	LOCUS_22710	sequence1:2280790..2280918(-)	partial			WP_001047304.1	hypothetical protein	92.9	57.3	81.4
MGA_2284	LOCUS_22800	sequence1:2291848..2292390(-)	partial			WP_013228061.1	GNAT family protein	55.0	52.7	43.4
MGA_2287	LOCUS_22830	sequence1:2294553..2294798(-)	partial			WP_001058939.1	M4 family metallopeptidase	61.7	8.8	82.0
MGA_2318	LOCUS_23140	sequence1:2337795..2338124(+)	partial			WP_000555000.1	hypothetical protein	82.6	64.1	68.1
MGA_2360	LOCUS_23560	sequence1:2377354..2378247(-)	frameshift		2378300	WP_094374263.1	IS3 family transposase	100.0	66.9	100.0
MGA_2361	LOCUS_23570	sequence1:2378271..2378687(-)	frameshift		2378300	WP_094396572.1	IS3 family transposase	93.5	29.1	89.9
MGA_2367	LOCUS_23630	sequence1:2381276..2382091(+)	frameshift		2381198	WP_128721742.1	IS3 family transposase	98.5	71.2	56.9
MGA_2368	LOCUS_23640	sequence1:2382374..2383339(-)	partial			WP_010968044.1	NAD(P)H-binding protein	63.2	59.5	28.4
MGA_2373	LOCUS_23690	sequence1:2384527..2385351(-)	partial			WP_001829566.1	orthopoxovirus protein, PF05708 family	57.7	82.1	31.4
MGA_2375	LOCUS_23710	sequence1:2386865..2388184(-)	partial			WP_004323434.1	MobV family relaxase	48.1	51.3	23.5
MGA_2378	LOCUS_23740	sequence1:2390080..2390310(+)	frameshift		2390271	WP_002267479.1	radical SAM protein	84.2	17.3	46.9
MGA_2379	LOCUS_23750	sequence1:2390307..2391194(+)	frameshift		2390271	WP_002267479.1	radical SAM protein	98.3	77.9	63.6
MGA_2383	LOCUS_23790	sequence1:2393324..2393551(-)	partial			WP_094374154.1	DUF3967 domain-containing protein	96.0	36.2	48.6
MGA_2440	LOCUS_24360	sequence1:2446163..2446393(+)	frameshift,internal_stop_codon	2446391..2446393(+),2446415..2446417(+)	2446549	WP_002326711.1	IS256-like element ISEf1 family transposase	68.4	13.3	53.8
MGA_2441	LOCUS_24370	sequence1:2446430..2446570(+)	frameshift,internal_stop_codon	2446391..2446393(+),2446415..2446417(+),2446568..2446570(+)	2446576	WP_002287843.1	IS256-like element ISEfa13 family transposase	95.7	11.3	63.6
MGA_2442	LOCUS_24380	sequence1:2446597..2446914(+)	frameshift,internal_stop_codon	2446391..2446393(+),2446415..2446417(+)	2446567	WP_002330912.1	IS256-like element ISLgar5 family transposase	80.0	21.2	51.2
MGA_2447	LOCUS_24430	sequence1:2450248..2450565(-)	partial			WP_000214801.1	metalloregulator ArsR/SmtB family transcription factor	41.9	48.5	72.9
MGA_2448	LOCUS_24440	sequence1:2450906..2451172(-)	partial			WP_011392582.1	4-hydroxy-tetrahydrodipicolinate synthase	72.7	21.9	39.1
MGA_2452	LOCUS_24480	sequence1:2453715..2454059(-)	internal_stop_codon	2454231..2454233(-)		WP_010965594.1	PLP-dependent aminotransferase family protein	89.5	21.8	35.3
MGA_2456	LOCUS_24520	sequence1:2457250..2457885(-)	internal_stop_codon	2457895..2457897(-)		WP_000333437.1	sulfotransferase family 2 domain-containing protein	99.1	80.4	62.7
MGA_2462	LOCUS_24580	sequence1:2463642..2463992(-)	partial			WP_029096096.1	ISL3 family transposase	84.5	18.2	37.8
MGA_2465	LOCUS_24610	sequence1:2466480..2466839(+)	frameshift,internal_stop_codon	2466240..2466242(+),2466234..2466236(+)	2466857,2466818	WP_000675870.1	tyrosine-type recombinase/integrase	94.1	30.6	54.0
MGA_2466	LOCUS_24620	sequence1:2466921..2467409(+)	frameshift		2466860,2466821	WP_000675870.1	tyrosine-type recombinase/integrase	64.8	28.5	56.2
MGA_2505	LOCUS_25010	sequence1:2503098..2503310(+)	partial			WP_000105663.1	MoxR family ATPase	54.3	12.3	65.8
MGA_2539	LOCUS_25350	sequence1:2545828..2546160(+)	partial			WP_005459779.1	GNAT family N-acetyltransferase	90.9	65.3	40.0
MGA_2671	LOCUS_26670	sequence1:2681722..2685747(-)	partial			WP_001260205.1	phage tail spike protein	65.1	52.3	47.1
MGA_2672	LOCUS_26680	sequence1:2685747..2687240(-)	partial			WP_011110097.1	phage tail spike protein	53.7	46.9	38.6
MGA_2673	LOCUS_26690	sequence1:2687249..2691289(-)	partial			WP_012047792.1	phage tail tape measure protein	62.0	80.0	26.6
MGA_2708	LOCUS_27040	sequence1:2709276..2710241(-)	partial			WP_000511415.1	DnaD domain protein	31.2	34.5	46.0
MGA_3026	LOCUS_30220	sequence1:2987217..2987801(-)	partial			WP_001013193.1	competence protein ComGA	100.0	55.9	85.1
MGA_3028	LOCUS_30240	sequence1:2988175..2988747(+)	partial			WP_000070642.1	DUF4352 domain-containing protein	63.2	36.9	35.8
MGA_3029	LOCUS_30250	sequence1:2989058..2989498(+)	partial			WP_029085243.1	ATP-binding protein	85.6	42.7	32.8
MGA_3033	LOCUS_30290	sequence1:2995359..2996852(-)	partial			WP_011110097.1	phage tail spike protein	53.9	47.4	40.9
MGA_3034	LOCUS_30300	sequence1:2996865..2999792(-)	partial			WP_012047792.1	phage tail tape measure protein	30.7	30.1	34.4
MGA_3049	LOCUS_30450	sequence1:3009497..3009886(-)	partial			WP_012047828.1	DUF1064 domain-containing protein	85.3	73.6	40.9
MGA_3060	LOCUS_30560	sequence1:3013980..3014783(-)	partial			WP_000190248.1	DnaD domain protein	53.6	56.0	66.4
MGA_3070	LOCUS_30660	sequence1:3017783..3018619(-)	partial			WP_000531223.1	phage regulatory protein	38.8	43.3	52.3
MGA_3073	LOCUS_30690	sequence1:3019514..3019939(+)	partial			WP_010708068.1	ImmA/IrrE family metallo-endopeptidase	78.0	64.9	34.2
MGA_3081	LOCUS_30770	sequence1:3027412..3027549(-)	frameshift		3027143	WP_001012359.1	nucleoside 2-deoxyribosyltransferase	100.0	36.3	57.8
MGA_3105	LOCUS_31010	sequence1:3054583..3054717(-)	partial			WP_078404002.1	putative mucin/carbohydrate-binding domain-containing protein	93.2	5.7	69.0
MGA_3152	LOCUS_31480	sequence1:3098160..3098960(-)	partial			WP_009879844.1	DNA internalization-related competence protein ComEC/Rec2	97.7	33.6	61.5
MGA_3176	LOCUS_31720	sequence1:3118766..3118966(-)	frameshift,internal_stop_codon	3119038..3119040(-)	3118962	WP_000706237.1	histidine phosphatase family protein	98.5	32.0	66.2
MGA_3235	LOCUS_32310	sequence1:3179872..3180006(-)	frameshift,internal_stop_codon	3179870..3179872(-),3180023..3180025(-)	3180044,3180134,3180239	WP_003158308.1	nitroreductase family protein	100.0	22.0	79.5
MGA_3246	LOCUS_32420	sequence1:3189641..3191665(-)	partial			WP_000690750.1	SafA/ExsA family spore coat assembly protein	55.8	71.7	59.8
MGA_3297	LOCUS_32930	sequence1:3246922..3256221(-)	partial			WP_189716469.1	type I polyketide synthase	43.7	73.7	32.0
MGA_3298	LOCUS_32940	sequence1:3256266..3257432(-)	partial			WP_014206166.1	MFS transporter	40.5	35.0	26.8
MGA_3299	LOCUS_32950	sequence1:3257499..3263594(-)	partial			WP_001255763.1	non-ribosomal peptide synthetase	31.0	12.4	36.0
MGA_3301	LOCUS_32970	sequence1:3267188..3268360(-)	partial			WP_038965886.1	nitroreductase family protein	70.3	72.4	28.8
MGA_3303	LOCUS_32990	sequence1:3269363..3269548(+)	frameshift,internal_stop_codon	3269732..3269734(+),3269546..3269548(+)	3269764	WP_000475206.1	PH domain-containing protein	82.0	24.5	90.0
MGA_3330	LOCUS_33260	sequence1:3293995..3294819(-)	partial			WP_002195845.1	collagen-like protein	51.8	47.8	90.8
MGA_3334	LOCUS_33300	sequence1:3296916..3297215(-)	frameshift		3297210,3296933	WP_000902915.1	ABC transporter permease	92.9	39.6	34.8
MGA_3335	LOCUS_33310	sequence1:3297178..3297555(-)	frameshift		3297210,3296933	WP_000902915.1	ABC transporter permease	98.4	56.5	37.7
MGA_3410	LOCUS_34060	sequence1:3372735..3373283(-)	frameshift		3372749	WP_001252898.1	hypothetical protein	100.0	78.8	79.1
MGA_3456	LOCUS_34520	sequence1:3418660..3421767(-)	partial			WP_000888064.1	DNA translocase FtsK	61.8	46.9	78.1
MGA_3483	LOCUS_34790	sequence1:3444805..3445275(-)	internal_stop_codon	3445513..3445515(-)		WP_055164393.1	IS30 family transposase	96.2	47.8	62.7
MGA_3486	LOCUS_34820	sequence1:3446211..3447194(-)	partial			WP_002405596.1	glycosyltransferase family 2 protein	91.1	67.7	28.7
MGA_3487	LOCUS_34830	sequence1:3447220..3447894(+)	frameshift		3447837	WP_010890758.1	peptidase domain-containing ABC transporter	78.6	23.8	48.3
MGA_3488	LOCUS_34840	sequence1:3447881..3448516(+)	frameshift		3447840	WP_010890758.1	peptidase domain-containing ABC transporter	92.9	26.5	55.6
MGA_3489	LOCUS_34850	sequence1:3448509..3449531(+)	partial			WP_010958618.1	HlyD family type I secretion periplasmic adaptor subunit	87.9	66.3	21.6
MGA_3492	LOCUS_34880	sequence1:3450841..3451554(+)	partial			WP_180941933.1	ISL3 family transposase	94.1	45.1	26.2
MGA_3511	LOCUS_35070	sequence1:3469904..3470149(-)	internal_stop_codon	3469904..3469906(-)		WP_001110858.1	hypothetical protein	100.0	75.7	64.2
MGA_3512	LOCUS_35080	sequence1:3470197..3470391(-)	partial			WP_000512469.1	spore germination protein	84.4	71.6	68.5
MGA_3548	LOCUS_35440	sequence1:3503128..3504573(-)	partial			WP_001205278.1	virulence factor transcriptional regulator MgaSpn	65.5	63.5	20.8
MGA_3549	LOCUS_35450	sequence1:3505335..3507965(-)	partial			WP_048538386.1	putative mucin/carbohydrate-binding domain-containing protein	74.5	51.4	45.8
MGA_3550	LOCUS_35460	sequence1:3508493..3508909(+)	frameshift		3508879	WP_094396572.1	IS3 family transposase	93.5	29.1	89.9
MGA_3551	LOCUS_35470	sequence1:3508933..3509826(+)	frameshift		3508879	WP_094396572.1	IS3 family transposase	100.0	66.9	100.0
MGA_3556	LOCUS_35520	sequence1:3517474..3518106(-)	partial			WP_000038576.1	YwbE family protein	34.8	32.5	68.9
MGA_3572	LOCUS_35680	sequence1:3529969..3530592(+)	partial			WP_000007825.1	YdcF family protein	99.5	59.9	85.0
MGA_3577	LOCUS_35730	sequence1:3533736..3533864(+)	internal_stop_codon	3533862..3533864(+)		WP_000737468.1	lipoprotein BA_5634 family protein	100.0	21.9	64.3
MGA_3591	LOCUS_35870	sequence1:3546397..3546702(+)	partial			WP_000144992.1	ABC transporter permease	92.1	15.2	69.7
MGA_3592	LOCUS_35880	sequence1:3546683..3547153(+)	partial			WP_000145003.1	ABC transporter permease	90.4	22.0	78.3
MGA_3604	LOCUS_36000	sequence1:3557780..3558079(+)	frameshift		3557750,3558071	WP_001147838.1	TIGR00266 family protein	99.0	37.7	80.6
MGA_3605	LOCUS_36010	sequence1:3558112..3558438(+)	frameshift		3558073	WP_001201260.1	TIGR00266 family protein	100.0	43.5	79.6
MGA_3678	LOCUS_36730	sequence1:3627456..3627680(+)	frameshift		3627662	WP_000721031.1	histidine phosphatase family protein	95.9	38.6	63.4
MGA_3679	LOCUS_36740	sequence1:3627707..3627997(+)	frameshift		3627662	WP_000720176.1	histidine phosphatase family protein	99.0	52.2	70.8
MGA_3703	LOCUS_36980	sequence1:3648376..3649326(-)	frameshift,internal_stop_codon	3649509..3649511(-)	3649454	WP_139264482.1	L-lactate dehydrogenase	100.0	79.2	93.0
MGA_3706	LOCUS_37010	sequence1:3650613..3650924(-)	partial			WP_076629448.1	IS200/IS605 family element RNA-guided endonuclease TnpB	94.2	26.1	60.8
MGA_3707	LOCUS_37020	sequence1:3651064..3651309(-)	partial			WP_001242338.1	MBL fold metallo-hydrolase	80.2	27.1	63.1
MGA_3719	LOCUS_37140	sequence1:3664344..3664535(-)	partial			WP_014654825.1	MFS transporter	88.9	14.2	85.7
MGA_3748	LOCUS_37430	sequence1:3695951..3697393(-)	partial			WP_011837580.1	M protein trans-acting positive regulator PRD domain-containing protein	65.6	63.5	21.3
MGA_3776	LOCUS_37710	sequence1:3726160..3726744(+)	partial			WP_002264760.1	TetR/AcrR family transcriptional regulator	37.1	35.3	39.7
MGA_3825	LOCUS_38200	sequence1:3772943..3773278(+)	frameshift,internal_stop_codon	3772899..3772901(+),3773277..3773279(+),3772980..3772982(+),3772968..3772970(+),3772944..3772946(+)	3773027,3773390	WP_000497611.1	flavodoxin family protein	83.8	51.4	71.0
MGA_3843	LOCUS_38380	sequence1:3792497..3792913(+)	frameshift		3792883	WP_094396572.1	IS3 family transposase	93.5	29.1	89.9
MGA_3851	LOCUS_38460	sequence1:3797048..3797239(+)	frameshift		3797209	WP_094374263.1	IS3 family transposase	42.9	6.1	96.3
MGA_3852	LOCUS_38470	sequence1:3797263..3797634(+)	frameshift,internal_stop_codon	3797633..3797635(+),3797912..3797914(+)	3797209	WP_094374263.1	IS3 family transposase	100.0	27.7	100.0
MGA_3853	LOCUS_38480	sequence1:3797635..3797913(+)	internal_stop_codon	3797632..3797634(+),3797911..3797913(+)		WP_094374263.1	IS3 family transposase	100.0	20.7	89.1
MGA_3855	LOCUS_38500	sequence1:3799962..3800522(-)	partial			WP_000287640.1	UDP-glucose/GDP-mannose dehydrogenase family protein	98.4	42.1	70.3
MGA_3856	LOCUS_38510	sequence1:3800494..3800871(-)	frameshift		3800900	WP_000287640.1	UDP-glucose/GDP-mannose dehydrogenase family protein	94.4	25.9	56.8
MGA_3887	LOCUS_38820	sequence1:3837290..3837415(-)	partial			WP_000666870.1	zinc ribbon domain-containing protein	97.6	8.7	77.5
MGA_3912	LOCUS_39070	sequence1:3861013..3861285(-)	partial			WP_213084042.1	sporulation transcriptional regulator SpoIIID	100.0	68.2	95.6
MGA_3929	LOCUS_39240	sequence1:3877915..3878790(-)	partial			WP_212088642.1	NADH-quinone oxidoreductase subunit C	88.0	59.1	57.0
MGA_3932	LOCUS_39270	sequence1:3879930..3881801(+)	frameshift		3881738	WP_000773548.1	EAL domain-containing protein	95.5	65.6	54.4
MGA_3933	LOCUS_39280	sequence1:3881794..3882648(+)	frameshift		3881738	WP_000773548.1	EAL domain-containing protein	99.6	31.2	66.1
MGA_3936	LOCUS_39310	sequence1:3885789..3886097(-)	internal_stop_codon	3885789..3885791(-)		WP_000622462.1	DUF975 family protein	99.0	47.2	66.3
MGA_3953	LOCUS_39480	sequence1:3899912..3900229(-)	frameshift,internal_stop_codon	3900274..3900276(-)	3900192	WP_011861290.1	IS200/IS605 family element RNA-guided endonuclease TnpB	78.1	22.0	51.2
MGA_3974	LOCUS_39690	sequence1:3918759..3919268(-)	partial			WP_000346278.1	DNA-directed RNA polymerase subunit delta	60.9	58.2	90.3
MGA_4003	LOCUS_39980	sequence1:3948977..3949285(-)	frameshift,internal_stop_codon	3949288..3949290(-),3948976..3948978(-)	3949389	WP_094374263.1	IS3 family transposase	100.0	23.0	46.1
MGA_4005	LOCUS_40000	sequence1:3949983..3950987(+)	partial			WP_003243950.1	minor protease Epr	73.1	37.5	38.6
MGA_4043	LOCUS_40380	sequence1:3984656..3985072(+)	frameshift		3985042	WP_094374263.1	IS3 family transposase	93.5	29.1	89.9
MGA_4044	LOCUS_40390	sequence1:3985096..3985989(+)	frameshift		3985042	WP_094374263.1	IS3 family transposase	100.0	66.9	100.0
MGA_4074	LOCUS_40690	sequence1:4023567..4024154(-)	partial			WP_000976957.1	NAD-dependent epimerase/dehydratase family protein	97.9	65.2	62.8
MGA_4075	LOCUS_40700	sequence1:4024353..4024592(-)	partial			WP_000976957.1	NAD-dependent epimerase/dehydratase family protein	89.9	24.2	69.0
MGA_4078	LOCUS_40730	sequence1:4026161..4027966(-)	partial			WP_003245617.1	mannose transport/utilization transcriptional regulator ManR	59.2	56.2	26.9
MGA_4095	LOCUS_40900	sequence1:4043317..4044258(-)	partial			WP_236615816.1	serine/threonine-protein kinase	39.9	22.0	33.6
MGA_4098	LOCUS_40930	sequence1:4046128..4047315(-)	partial			WP_011178703.1	WXG100 family type VII secretion target	57.0	51.0	44.5
