# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_1	LOCUS_00010	sequence1:27..1016(+)	internal_stop_codon	1014..1016(+),1212..1214(+)		WP_039275826.1	chromosomal replication initiator protein DnaA	76.9	56.0	31.8
MGA_2	LOCUS_00020	sequence1:1541..1828(+)	partial			WP_011183534.1	50S ribosomal protein L31	68.4	69.6	42.4
MGA_3	LOCUS_00030	sequence1:1961..2401(+)	internal_stop_codon	2399..2401(+)		WP_011183530.1	peptide chain release factor 1	97.9	39.9	44.8
MGA_4	LOCUS_00040	sequence1:2405..2800(+)	internal_stop_codon	2399..2401(+),2798..2800(+)		WP_010874717.1	peptide chain release factor 1	100.0	36.5	73.3
MGA_13	LOCUS_00130	sequence1:6201..7106(+)	internal_stop_codon	7104..7106(+)		WP_010933513.1	magnesium transporter	91.4	59.8	26.4
MGA_14	LOCUS_00140	sequence1:7119..7766(+)	internal_stop_codon	7104..7106(+)		WP_005898141.1	magnesium transporter	88.4	35.9	35.8
MGA_18	LOCUS_00180	sequence1:11361..11960(-)	internal_stop_codon	11226..11228(-),11361..11363(-)		WP_011166219.1	ABC transporter permease	98.0	60.6	34.0
MGA_26	LOCUS_00260	sequence1:16169..16786(-)	internal_stop_codon	16925..16927(-),16853..16855(-)		WP_010874409.1	BMP family ABC transporter substrate-binding protein	49.8	15.7	39.8
MGA_41	LOCUS_00410	sequence1:26045..26431(-)	internal_stop_codon	26045..26047(-)		WP_000925219.1	iron ABC transporter permease	78.9	30.5	32.4
MGA_43	LOCUS_00430	sequence1:27057..27341(-)	internal_stop_codon	27513..27515(-)		WP_011141828.1	30S ribosomal protein S2	78.7	27.4	49.3
MGA_44	LOCUS_00440	sequence1:27513..27725(-)	internal_stop_codon	27513..27515(-),27735..27737(-)		WP_001832557.1	30S ribosomal protein S2	100.0	26.3	44.3
MGA_59	LOCUS_00590	sequence1:38740..39573(-)	frameshift,internal_stop_codon	39595..39597(-),38797..38799(-)	38835,39703	WP_002263383.1	Eco57I restriction-modification methylase domain-containing protein	76.9	45.8	27.9
MGA_61	LOCUS_00610	sequence1:41168..41326(+)	internal_stop_codon	41114..41116(+),40991..40993(+),41324..41326(+)		WP_011109350.1	ATP-binding protein	96.2	9.7	62.0
MGA_63	LOCUS_00630	sequence1:41825..42094(+)	internal_stop_codon	42134..42136(+),42092..42094(+)		WP_011167160.1	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	96.6	13.7	70.9
MGA_64	LOCUS_00640	sequence1:42377..43255(+)	internal_stop_codon	42134..42136(+),42092..42094(+),43253..43255(+)		WP_011167160.1	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	99.0	45.9	60.2
MGA_66	LOCUS_00660	sequence1:43728..44042(+)	partial			WP_011167063.1	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	95.2	68.6	45.5
MGA_71	LOCUS_00710	sequence1:46231..46416(+)	internal_stop_codon	46222..46224(+),46441..46443(+),46414..46416(+)		WP_011166801.1	DUF31 family protein	80.3	5.7	55.1
MGA_72	LOCUS_00720	sequence1:46690..46962(+)	frameshift,internal_stop_codon	46961..46963(+),46625..46627(+),47183..47185(+),46577..46579(+)	46561	WP_011166809.1	DUF31 family protein	93.3	10.0	38.4
MGA_73	LOCUS_00730	sequence1:47365..47856(+)	internal_stop_codon	47269..47271(+),47182..47184(+)		WP_011166809.1	DUF31 family protein	100.0	18.9	56.5
MGA_74	LOCUS_00740	sequence1:47879..48604(+)	partial			WP_011387230.1	putative immunoglobulin-blocking virulence protein	27.4	8.8	44.8
MGA_75	LOCUS_00750	sequence1:48782..49012(+)	internal_stop_codon	48701..48703(+),49088..49090(+),49010..49012(+)		WP_011166808.1	putative immunoglobulin-blocking virulence protein	100.0	10.1	47.4
MGA_76	LOCUS_00760	sequence1:49316..49501(+)	internal_stop_codon	49535..49537(+),49088..49090(+),49499..49501(+),49706..49708(+)		WP_011166808.1	putative immunoglobulin-blocking virulence protein	95.1	7.7	63.8
MGA_79	LOCUS_00790	sequence1:51140..51325(+)	internal_stop_codon	51323..51325(+),51131..51133(+),51350..51352(+)		WP_011166809.1	DUF31 family protein	93.4	6.6	53.4
MGA_80	LOCUS_00800	sequence1:51599..51874(+)	internal_stop_codon	51323..51325(+),52106..52108(+),51872..51874(+),51350..51352(+),51485..51487(+),51533..51535(+),52070..52072(+)		WP_020862862.1	DUF31 family protein	93.4	10.1	43.7
MGA_82	LOCUS_00820	sequence1:52412..52762(+)	internal_stop_codon	52193..52195(+)		WP_020862862.1	DUF31 family protein	96.6	13.2	63.4
MGA_85	LOCUS_00850	sequence1:54716..55174(+)	internal_stop_codon	54440..54442(+),54476..54478(+),54647..54649(+)		WP_011387230.1	putative immunoglobulin-blocking virulence protein	96.7	19.6	45.0
MGA_88	LOCUS_00880	sequence1:56530..56949(+)	internal_stop_codon	56365..56367(+),56947..56949(+),56524..56526(+)		WP_205842899.1	DUF31 family protein	100.0	17.4	34.3
MGA_90	LOCUS_00900	sequence1:57286..57792(+)	internal_stop_codon	57235..57237(+)		WP_011166801.1	DUF31 family protein	97.0	19.7	52.6
MGA_100	LOCUS_01000	sequence1:63371..63661(+)	internal_stop_codon	63659..63661(+)		WP_011166795.1	ATP F0F1 synthase subunit alpha	93.8	17.5	41.1
MGA_101	LOCUS_01010	sequence1:63737..64636(+)	internal_stop_codon	63659..63661(+),64823..64825(+),64634..64636(+)		WP_011166795.1	ATP F0F1 synthase subunit alpha	99.7	58.1	70.6
MGA_102	LOCUS_01020	sequence1:64676..64825(+)	internal_stop_codon	64823..64825(+),64634..64636(+)		WP_011166795.1	ATP F0F1 synthase subunit alpha	95.9	9.1	57.4
MGA_103	LOCUS_01030	sequence1:65125..66270(+)	internal_stop_codon	64933..64935(+)		WP_011166794.1	F0F1 ATP synthase subunit beta	99.7	83.0	75.3
MGA_108	LOCUS_01080	sequence1:70046..70192(+)	internal_stop_codon	70190..70192(+)		WP_010874599.1	preprotein translocase subunit SecG	97.9	61.8	63.8
MGA_109	LOCUS_01090	sequence1:70271..71338(+)	internal_stop_codon	71336..71338(+)		WP_003228386.1	ribonuclease R	78.3	36.1	36.9
MGA_110	LOCUS_01100	sequence1:71360..71836(+)	internal_stop_codon	71336..71338(+),71834..71836(+)		WP_011476190.1	ribonuclease R	100.0	18.6	33.7
MGA_111	LOCUS_01110	sequence1:71843..72019(+)	internal_stop_codon	71834..71836(+),72017..72019(+)		WP_164926872.1	ribonuclease R	84.5	6.2	69.4
MGA_112	LOCUS_01120	sequence1:72020..72436(+)	internal_stop_codon	71834..71836(+),72017..72019(+)		WP_002387150.1	ribonuclease R	95.7	16.7	41.7
MGA_118	LOCUS_01180	sequence1:74209..74820(+)	internal_stop_codon	74110..74112(+)		WP_011861067.1	ABC transporter ATP-binding protein	92.6	32.7	43.1
MGA_119	LOCUS_01190	sequence1:74999..75523(+)	partial			WP_010965688.1	ABC transporter ATP-binding protein	92.5	27.8	30.1
MGA_121	LOCUS_01210	sequence1:75875..76591(+)	partial			WP_011986492.1	ABC transporter ATP-binding protein	98.3	40.2	52.8
MGA_124	LOCUS_01240	sequence1:77555..78382(+)	internal_stop_codon	78380..78382(+)		WP_011166280.1	lysine--tRNA ligase	99.3	55.6	48.2
MGA_125	LOCUS_01250	sequence1:78389..79036(+)	internal_stop_codon	78380..78382(+)		WP_011166280.1	lysine--tRNA ligase	99.1	42.8	58.4
MGA_128	LOCUS_01280	sequence1:80346..80648(-)	internal_stop_codon	80700..80702(-),80346..80348(-)		WP_010874554.1	oligoendopeptidase F	75.0	11.9	52.0
MGA_129	LOCUS_01290	sequence1:80700..80978(-)	internal_stop_codon	80700..80702(-),81054..81056(-),81063..81065(-)		WP_010989921.1	oligoendopeptidase F	100.0	15.3	39.8
MGA_132	LOCUS_01320	sequence1:82482..83054(+)	partial			WP_011182940.1	phosphate acetyltransferase	87.4	56.8	31.0
MGA_136	LOCUS_01360	sequence1:85380..85637(-)	partial			WP_011031636.1	siderophore ABC transporter permease CdtC	97.6	12.2	36.5
MGA_137	LOCUS_01370	sequence1:85737..86450(-)	internal_stop_codon	85737..85739(-)		WP_010989919.1	iron ABC transporter permease	69.6	48.3	31.0
MGA_141	LOCUS_01410	sequence1:88879..89175(+)	internal_stop_codon	88822..88824(+),89353..89355(+),89173..89175(+)		WP_009888861.1	hemolysin family protein	99.0	21.1	34.0
MGA_144	LOCUS_01440	sequence1:90015..90677(-)	partial			WP_011182963.1	DNA-binding protein WhiA	89.5	61.5	35.2
MGA_147	LOCUS_01470	sequence1:91921..92364(-)	internal_stop_codon	92494..92496(-),92437..92439(-),92377..92379(-)		WP_010874581.1	prolipoprotein diacylglyceryl transferase	84.4	29.8	37.1
MGA_148	LOCUS_01480	sequence1:92929..93555(-)	internal_stop_codon	93697..93699(-)		WP_010874580.1	HPr(Ser) kinase/phosphatase	96.2	64.1	44.0
MGA_151	LOCUS_01510	sequence1:94269..94781(-)	internal_stop_codon	94269..94271(-)		WP_011183569.1	tRNA lysidine(34) synthetase TilS	99.4	42.5	43.9
MGA_155	LOCUS_01550	sequence1:97123..97257(+)	internal_stop_codon	97255..97257(+),97531..97533(+)		WP_010874360.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	100.0	6.8	75.0
MGA_156	LOCUS_01560	sequence1:97288..97533(+)	internal_stop_codon	97255..97257(+),97684..97686(+),97786..97788(+),97531..97533(+)		WP_010874360.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	100.0	12.5	75.3
MGA_157	LOCUS_01570	sequence1:98299..98913(+)	internal_stop_codon	98911..98913(+)		WP_010874360.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	96.1	30.2	67.9
MGA_158	LOCUS_01580	sequence1:98923..99075(+)	internal_stop_codon	98911..98913(+)		WP_010874360.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	98.0	7.5	75.5
MGA_159	LOCUS_01590	sequence1:99097..99354(+)	internal_stop_codon	99352..99354(+)		WP_010874361.1	DNA topoisomerase (ATP-hydrolyzing) subunit A	84.7	8.6	61.1
MGA_162	LOCUS_01620	sequence1:102236..103102(+)	internal_stop_codon	103100..103102(+)		WP_010933587.1	recombinase RecA	95.8	80.1	47.3
MGA_163	LOCUS_01630	sequence1:103272..104693(+)	partial			WP_011921986.1	ribonuclease Y	83.1	72.8	35.4
MGA_165	LOCUS_01650	sequence1:105258..105590(-)	internal_stop_codon	105126..105128(-),105198..105200(-),105258..105260(-)		WP_010874742.1	deoxynucleoside kinase	92.7	44.5	55.9
MGA_166	LOCUS_01660	sequence1:105788..106195(+)	internal_stop_codon	106193..106195(+)		WP_001109040.1	DNA polymerase III subunit gamma/tau	100.0	23.9	55.6
MGA_169	LOCUS_01690	sequence1:107990..108502(+)	internal_stop_codon	107978..107980(+)		WP_000966735.1	recombination mediator RecR	94.1	80.3	32.5
MGA_172	LOCUS_01720	sequence1:111242..111721(+)	internal_stop_codon	111719..111721(+),111953..111955(+)		WP_010874418.1	signal recognition particle protein	100.0	35.1	57.2
MGA_173	LOCUS_01730	sequence1:111794..111955(+)	internal_stop_codon	111719..111721(+),111953..111955(+)		WP_010874418.1	signal recognition particle protein	98.1	11.6	67.3
MGA_174	LOCUS_01740	sequence1:112106..112360(+)	internal_stop_codon	112358..112360(+),111953..111955(+)		WP_011183377.1	signal recognition particle protein	100.0	18.4	53.6
MGA_175	LOCUS_01750	sequence1:112379..112588(+)	internal_stop_codon	112358..112360(+)		WP_010874418.1	signal recognition particle protein	97.1	14.9	56.7
MGA_176	LOCUS_01760	sequence1:112800..113117(+)	internal_stop_codon	113154..113156(+),113232..113234(+),113115..113117(+)		WP_011166520.1	ABC transporter permease	93.3	15.9	38.4
MGA_184	LOCUS_01840	sequence1:120188..121171(-)	internal_stop_codon	121172..121174(-)		WP_125119442.1	type I restriction endonuclease subunit R	99.7	31.5	37.5
MGA_185	LOCUS_01850	sequence1:121172..122296(-)	internal_stop_codon	121172..121174(-),122366..122368(-)		WP_137656664.1	type I restriction endonuclease subunit R	100.0	34.0	50.3
MGA_186	LOCUS_01860	sequence1:122366..122518(-)	internal_stop_codon	122600..122602(-),122366..122368(-)		WP_012870273.1	type I restriction endonuclease subunit R	100.0	4.7	64.0
MGA_187	LOCUS_01870	sequence1:122600..122863(-)	internal_stop_codon	123086..123088(-),122600..122602(-),122366..122368(-)		WP_012870273.1	type I restriction endonuclease subunit R	100.0	9.0	64.5
MGA_188	LOCUS_01880	sequence1:123086..123325(-)	internal_stop_codon	123086..123088(-)		WP_209611207.1	type I restriction endonuclease subunit R	97.5	7.7	49.4
MGA_189	LOCUS_01890	sequence1:123346..123867(-)	partial			WP_209435792.1	restriction endonuclease subunit S	96.5	42.4	35.3
MGA_190	LOCUS_01900	sequence1:124005..124268(-)	partial			WP_013023147.1	restriction endonuclease subunit S	97.7	19.6	44.7
MGA_191	LOCUS_01910	sequence1:124347..125393(+)	partial			WP_012870275.1	type I restriction-modification system subunit M	99.4	64.8	59.5
MGA_192	LOCUS_01920	sequence1:125397..126200(+)	partial			WP_013023147.1	restriction endonuclease subunit S	86.1	56.5	33.9
MGA_195	LOCUS_01950	sequence1:127734..128693(+)	internal_stop_codon	128691..128693(+)		WP_010874976.1	excinuclease ABC subunit UvrA	99.7	33.5	59.5
MGA_196	LOCUS_01960	sequence1:128937..130565(+)	internal_stop_codon	128691..128693(+)		WP_010874976.1	excinuclease ABC subunit UvrA	99.6	57.0	68.0
MGA_201	LOCUS_02010	sequence1:132483..132881(+)	internal_stop_codon	132381..132383(+)		WP_000892188.1	hypoxanthine phosphoribosyltransferase	90.2	66.1	54.6
MGA_203	LOCUS_02030	sequence1:133711..135051(+)	partial			WP_010875028.1	ATP-dependent zinc metalloprotease FtsH	100.0	62.6	60.1
MGA_204	LOCUS_02040	sequence1:135162..135587(+)	internal_stop_codon	135585..135587(+),135744..135746(+)		WP_010880145.1	serine--tRNA ligase	100.0	33.2	38.0
MGA_205	LOCUS_02050	sequence1:135861..136181(+)	internal_stop_codon	135585..135587(+),135744..135746(+),136179..136181(+)		WP_012545752.1	serine--tRNA ligase	98.1	24.5	69.2
MGA_206	LOCUS_02060	sequence1:136821..137426(+)	internal_stop_codon	137562..137564(+),137574..137576(+)		WP_010874412.1	ATP-binding cassette domain-containing protein	78.6	28.4	47.5
MGA_208	LOCUS_02080	sequence1:137733..138008(+)	internal_stop_codon	137562..137564(+),138006..138008(+),138231..138233(+),137574..137576(+)		WP_010874412.1	ATP-binding cassette domain-containing protein	98.9	16.1	73.3
MGA_212	LOCUS_02120	sequence1:138835..139371(+)	internal_stop_codon	138703..138705(+)		WP_010874413.1	ABC transporter permease	91.6	59.4	32.9
MGA_213	LOCUS_02130	sequence1:139664..140071(+)	internal_stop_codon	139403..139405(+),140069..140071(+)		WP_010874414.1	ABC transporter permease	94.8	44.8	58.6
MGA_215	LOCUS_02150	sequence1:140951..142252(+)	partial			WP_010874415.1	lipoprotein	57.5	44.5	26.7
MGA_223	LOCUS_02230	sequence1:154006..154896(+)	partial			WP_010874438.1	ABC transporter ATP-binding protein	87.8	55.7	52.3
MGA_224	LOCUS_02240	sequence1:154925..155524(+)	internal_stop_codon	155522..155524(+)		WP_010874567.1	preprotein translocase subunit SecA	99.5	24.6	49.2
MGA_225	LOCUS_02250	sequence1:155900..157090(+)	internal_stop_codon	157088..157090(+)		WP_010874567.1	preprotein translocase subunit SecA	99.7	48.9	53.2
MGA_226	LOCUS_02260	sequence1:157441..158454(+)	internal_stop_codon	158452..158454(+)		WP_000441064.1	excinuclease ABC subunit B	97.0	49.7	50.2
MGA_227	LOCUS_02270	sequence1:158503..159441(+)	internal_stop_codon	158452..158454(+)		WP_164919771.1	excinuclease ABC subunit UvrB	99.4	47.1	58.3
MGA_228	LOCUS_02280	sequence1:159612..160439(+)	internal_stop_codon	159576..159578(+),160437..160439(+)		WP_002484896.1	NAD-dependent DNA ligase LigA	100.0	40.9	46.0
MGA_229	LOCUS_02290	sequence1:160566..161525(+)	internal_stop_codon	160437..160439(+)		WP_011166932.1	NAD-dependent DNA ligase LigA	99.4	46.3	40.7
MGA_231	LOCUS_02310	sequence1:162492..163025(+)	internal_stop_codon	163062..163064(+),163230..163232(+),163050..163052(+),163023..163025(+)		WP_011167108.1	cysteine--tRNA ligase	100.0	40.6	49.2
MGA_232	LOCUS_02320	sequence1:163233..163724(+)	internal_stop_codon	163062..163064(+),163230..163232(+),163050..163052(+),163023..163025(+)		WP_000152276.1	cysteine--tRNA ligase	90.2	33.1	36.4
MGA_248	LOCUS_02480	sequence1:173464..174705(-)	internal_stop_codon	174706..174708(-)		WP_010874957.1	F0F1 ATP synthase subunit alpha	62.0	49.6	62.3
MGA_249	LOCUS_02490	sequence1:174706..175455(-)	internal_stop_codon	174706..174708(-)		WP_010874957.1	F0F1 ATP synthase subunit alpha	98.4	47.3	60.0
MGA_250	LOCUS_02500	sequence1:175458..175757(-)	partial			WP_012258896.1	ATP synthase F1 subunit delta	61.6	38.2	37.7
MGA_252	LOCUS_02520	sequence1:176310..176702(-)	partial			WP_003546741.1	F0F1 ATP synthase subunit B	95.4	63.3	31.2
MGA_254	LOCUS_02540	sequence1:176996..177325(-)	partial			WP_010874960.1	F0F1 ATP synthase subunit C	65.1	67.6	45.1
MGA_259	LOCUS_02590	sequence1:179671..179811(+)	internal_stop_codon	179809..179811(+)		WP_010874782.1	AAA family ATPase	100.0	4.7	58.7
MGA_260	LOCUS_02600	sequence1:179839..180117(+)	internal_stop_codon	179809..179811(+),180382..180384(+),180115..180117(+)		WP_010874782.1	AAA family ATPase	94.6	8.9	35.6
MGA_261	LOCUS_02610	sequence1:180151..180384(+)	internal_stop_codon	180115..180117(+),180382..180384(+)		WP_010874782.1	AAA family ATPase	98.7	7.7	40.8
MGA_263	LOCUS_02630	sequence1:180841..181485(+)	internal_stop_codon	180808..180810(+)		WP_011183129.1	AAA family ATPase	99.1	21.5	33.8
MGA_264	LOCUS_02640	sequence1:181936..182616(+)	partial			WP_010874782.1	AAA family ATPase	95.1	21.9	46.0
MGA_266	LOCUS_02660	sequence1:182922..183194(+)	internal_stop_codon	183192..183194(+),182835..182837(+)		WP_010874781.1	signal recognition particle-docking protein FtsY	94.4	24.4	54.1
MGA_267	LOCUS_02670	sequence1:183348..183674(+)	internal_stop_codon	183192..183194(+)		WP_011183134.1	signal recognition particle-docking protein FtsY	98.1	28.9	57.5
MGA_319	LOCUS_03190	sequence1:212094..212669(-)	internal_stop_codon	212094..212096(-)		WP_010874901.1	DUF2779 domain-containing protein	99.0	28.2	46.9
MGA_321	LOCUS_03210	sequence1:214152..214346(-)	partial			WP_009930487.1	Cof-type HAD-IIB family hydrolase	96.9	22.3	48.4
MGA_323	LOCUS_03230	sequence1:214605..214994(-)	partial			WP_011166439.1	Cof-type HAD-IIB family hydrolase	96.1	42.7	36.8
MGA_327	LOCUS_03270	sequence1:216831..217334(+)	internal_stop_codon	216723..216725(+)		WP_011166499.1	NAD(+)/NADH kinase	92.8	55.5	31.8
MGA_330	LOCUS_03300	sequence1:218216..218500(-)	internal_stop_codon	218216..218218(-)		WP_002355021.1	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	100.0	59.1	43.6
MGA_331	LOCUS_03310	sequence1:218563..219045(+)	internal_stop_codon	219043..219045(+)		WP_012545593.1	triose-phosphate isomerase	99.4	66.7	31.7
MGA_333	LOCUS_03330	sequence1:219296..219670(+)	internal_stop_codon	219668..219670(+),219854..219856(+)		WP_001085507.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	91.1	23.8	40.8
MGA_334	LOCUS_03340	sequence1:219884..220804(+)	internal_stop_codon	219668..219670(+),219854..219856(+)		WP_010874985.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	92.8	56.5	41.2
MGA_336	LOCUS_03360	sequence1:221829..222677(+)	internal_stop_codon	222750..222752(+),222675..222677(+),222687..222689(+)		WP_010874963.1	phosphopyruvate hydratase	97.2	60.1	51.1
MGA_337	LOCUS_03370	sequence1:222795..223151(+)	internal_stop_codon	222750..222752(+),222675..222677(+),222687..222689(+)		WP_004080719.1	phosphopyruvate hydratase	87.3	24.0	72.8
MGA_338	LOCUS_03380	sequence1:223120..223677(+)	internal_stop_codon	223843..223845(+),223675..223677(+)		WP_005460467.1	6-phosphofructokinase	94.1	53.8	36.2
MGA_340	LOCUS_03400	sequence1:224097..225521(+)	partial			WP_010874660.1	pyruvate kinase	75.3	70.7	47.9
MGA_341	LOCUS_03410	sequence1:225644..227020(+)	internal_stop_codon	227018..227020(+)		WP_010874872.1	DNA-directed RNA polymerase subunit beta	99.8	31.9	37.5
MGA_342	LOCUS_03420	sequence1:227177..228409(+)	internal_stop_codon	228407..228409(+),227018..227020(+)		WP_010874872.1	DNA-directed RNA polymerase subunit beta	100.0	28.7	56.1
MGA_343	LOCUS_03430	sequence1:228509..229579(+)	internal_stop_codon	228407..228409(+),229577..229579(+)		WP_010874872.1	DNA-directed RNA polymerase subunit beta	100.0	25.7	57.6
MGA_345	LOCUS_03450	sequence1:230102..230281(+)	internal_stop_codon	230033..230035(+),230279..230281(+)		WP_003701972.1	DNA-directed RNA polymerase subunit beta'	100.0	4.8	69.5
MGA_346	LOCUS_03460	sequence1:230594..230821(+)	internal_stop_codon	230819..230821(+),230849..230851(+)		WP_010874871.1	DNA-directed RNA polymerase subunit beta'	97.3	5.8	41.3
MGA_347	LOCUS_03470	sequence1:230852..231397(+)	internal_stop_codon	230819..230821(+),231395..231397(+),231632..231634(+),230849..230851(+)		WP_010874871.1	DNA-directed RNA polymerase subunit beta'	100.0	14.1	66.5
MGA_348	LOCUS_03480	sequence1:231491..231634(+)	internal_stop_codon	231395..231397(+),231632..231634(+)		WP_010874871.1	DNA-directed RNA polymerase subunit beta'	100.0	3.6	87.2
MGA_349	LOCUS_03490	sequence1:231686..232351(+)	internal_stop_codon	232349..232351(+),231632..231634(+)		WP_010874871.1	DNA-directed RNA polymerase subunit beta'	99.5	15.8	41.2
MGA_350	LOCUS_03500	sequence1:232427..233887(+)	internal_stop_codon	232349..232351(+)		WP_010874871.1	DNA-directed RNA polymerase subunit beta'	100.0	37.5	58.3
MGA_355	LOCUS_03550	sequence1:236217..236606(+)	internal_stop_codon	236604..236606(+),236670..236672(+)		WP_002387396.1	ribose-phosphate diphosphokinase	93.8	37.5	61.2
MGA_356	LOCUS_03560	sequence1:236679..237209(+)	internal_stop_codon	236604..236606(+),236670..236672(+)		WP_011182973.1	ribose-phosphate pyrophosphokinase	92.0	48.1	41.7
MGA_357	LOCUS_03570	sequence1:237216..237596(+)	internal_stop_codon	237594..237596(+)		WP_010874429.1	ribonuclease M5	86.5	60.1	45.0
MGA_358	LOCUS_03580	sequence1:237759..238307(+)	internal_stop_codon	238305..238307(+)		WP_010874428.1	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	91.8	61.6	50.6
MGA_360	LOCUS_03600	sequence1:239846..240097(+)	internal_stop_codon	240095..240097(+)		WP_001291370.1	methionine--tRNA ligase	88.0	11.0	71.2
MGA_361	LOCUS_03610	sequence1:240143..240493(+)	internal_stop_codon	240680..240682(+),240095..240097(+),240740..240742(+),240491..240493(+),240611..240613(+),240536..240538(+)		WP_000136757.1	methionine--tRNA ligase	97.4	18.0	48.3
MGA_362	LOCUS_03620	sequence1:240764..241162(+)	internal_stop_codon	241160..241162(+),240680..240682(+),240740..240742(+),240491..240493(+),240611..240613(+),240536..240538(+)		WP_002457101.1	methionine--tRNA ligase	100.0	20.1	40.2
MGA_366	LOCUS_03660	sequence1:242932..243621(+)	internal_stop_codon	243619..243621(+),242911..242913(+),243859..243861(+)		WP_010874967.1	phosphate ABC transporter permease PstA	99.1	34.3	37.9
MGA_367	LOCUS_03670	sequence1:244120..244314(+)	internal_stop_codon	244054..244056(+),244312..244314(+)		WP_011405019.1	phosphate ABC transporter permease PstA	81.2	16.6	48.1
MGA_371	LOCUS_03710	sequence1:245141..245506(+)	internal_stop_codon	245771..245773(+),245504..245506(+),245135..245137(+)		WP_010870525.1	phosphate ABC transporter ATP-binding protein PstB	96.7	46.4	62.4
MGA_372	LOCUS_03720	sequence1:245615..245773(+)	internal_stop_codon	245771..245773(+),245504..245506(+)		WP_004399074.1	phosphate ABC transporter ATP-binding protein PstB	100.0	20.0	65.4
MGA_378	LOCUS_03780	sequence1:247210..247779(+)	internal_stop_codon	247777..247779(+)		WP_009935691.1	copper-translocating P-type ATPase	99.5	23.2	29.8
MGA_379	LOCUS_03790	sequence1:247801..248850(+)	internal_stop_codon	248848..248850(+),247777..247779(+)		WP_001832365.1	heavy metal translocating P-type ATPase	87.7	38.4	35.3
MGA_382	LOCUS_03820	sequence1:249888..250490(-)	internal_stop_codon	249888..249890(-)		WP_003547887.1	ribonuclease III	94.0	80.7	37.7
MGA_383	LOCUS_03830	sequence1:250480..251229(-)	internal_stop_codon	251314..251316(-)		WP_010874903.1	phosphate acyltransferase PlsX	98.8	75.3	45.0
MGA_391	LOCUS_03910	sequence1:256155..256373(+)	internal_stop_codon	256371..256373(+)		WP_011166418.1	guanylate kinase	100.0	24.2	61.1
MGA_392	LOCUS_03920	sequence1:256711..257280(+)	internal_stop_codon	257311..257313(+),257278..257280(+),257410..257412(+)		WP_002293986.1	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	86.2	49.0	32.0
MGA_395	LOCUS_03950	sequence1:258474..259265(+)	internal_stop_codon	259263..259265(+)		WP_012584135.1	serine/threonine-protein kinase	92.8	31.4	31.6
MGA_398	LOCUS_03980	sequence1:260766..260969(+)	internal_stop_codon	261240..261242(+),261075..261077(+),260967..260969(+)		WP_002296683.1	ammonium transporter	89.6	14.1	50.0
MGA_400	LOCUS_04000	sequence1:262448..262651(+)	internal_stop_codon	262757..262759(+),262649..262651(+),262922..262924(+)		WP_002296683.1	ammonium transporter	86.6	14.4	48.3
MGA_402	LOCUS_04020	sequence1:263411..263830(+)	internal_stop_codon	263387..263389(+),263228..263230(+),263153..263155(+),263270..263272(+)		WP_071831524.1	ammonium transporter	84.2	24.9	33.6
MGA_407	LOCUS_04070	sequence1:267305..267805(+)	partial			WP_002456225.1	tyrosine recombinase XerC	76.5	51.7	34.6
MGA_419	LOCUS_04190	sequence1:274443..274817(+)	internal_stop_codon	274815..274817(+)		WP_010874472.1	translation initiation factor IF-3	83.9	51.7	48.1
MGA_424	LOCUS_04240	sequence1:276181..276882(+)	partial			WP_010874522.1	50S ribosomal protein L3	91.4	74.9	49.8
MGA_425	LOCUS_04250	sequence1:276893..277087(+)	internal_stop_codon	277139..277141(+),277085..277087(+)		WP_010874523.1	50S ribosomal protein L4	100.0	30.7	56.9
MGA_426	LOCUS_04260	sequence1:277154..277435(+)	internal_stop_codon	277139..277141(+),277433..277435(+),277085..277087(+)		WP_011183021.1	50S ribosomal protein L4	97.8	43.3	41.8
MGA_427	LOCUS_04270	sequence1:277531..277848(+)	partial			WP_010874524.1	50S ribosomal protein L23	84.8	37.1	37.1
MGA_430	LOCUS_04300	sequence1:280359..280616(+)	internal_stop_codon	280101..280103(+),280614..280616(+)		WP_011183026.1	30S ribosomal protein S3	100.0	35.3	67.1
MGA_431	LOCUS_04310	sequence1:280793..280915(+)	internal_stop_codon	280913..280915(+),281069..281071(+),280985..280987(+)		WP_011166906.1	50S ribosomal protein L16	100.0	29.2	82.5
MGA_436	LOCUS_04360	sequence1:282442..282732(+)	internal_stop_codon	282730..282732(+)		WP_010874534.1	50S ribosomal protein L5	96.9	51.7	62.4
MGA_439	LOCUS_04390	sequence1:283603..283854(+)	internal_stop_codon	283852..283854(+)		WP_010874537.1	50S ribosomal protein L6	100.0	46.2	40.0
MGA_443	LOCUS_04430	sequence1:285680..286642(+)	internal_stop_codon	286820..286822(+),286640..286642(+)		WP_010874541.1	preprotein translocase subunit SecY	96.9	65.4	43.7
MGA_444	LOCUS_04440	sequence1:287104..287478(+)	internal_stop_codon	287476..287478(+)		WP_003723678.1	adenylate kinase	100.0	59.1	41.9
MGA_445	LOCUS_04450	sequence1:287479..287745(+)	internal_stop_codon	287476..287478(+)		WP_011183041.1	nucleoside monophosphate kinase	90.9	38.7	42.7
MGA_446	LOCUS_04460	sequence1:287980..288429(+)	internal_stop_codon	287827..287829(+),288466..288468(+),288427..288429(+)		WP_011166892.1	type I methionyl aminopeptidase	93.3	55.4	40.0
MGA_449	LOCUS_04490	sequence1:289551..289718(+)	internal_stop_codon	289461..289463(+)		WP_003401717.1	30S ribosomal protein S11	98.2	40.9	74.1
MGA_450	LOCUS_04500	sequence1:289755..290078(+)	internal_stop_codon	290076..290078(+)		WP_010874548.1	DNA-directed RNA polymerase subunit alpha	90.7	30.0	44.9
MGA_451	LOCUS_04510	sequence1:290085..290738(+)	internal_stop_codon	290076..290078(+)		WP_010874548.1	DNA-directed RNA polymerase subunit alpha	95.4	63.3	44.9
MGA_461	LOCUS_04610	sequence1:295023..295610(+)	partial			WP_001829639.1	YigZ family protein	62.1	56.8	49.6
MGA_465	LOCUS_04650	sequence1:298444..298731(-)	internal_stop_codon	298756..298758(-),298324..298326(-),298444..298446(-)		WP_011948276.1	calcium-translocating P-type ATPase, SERCA-type	100.0	10.9	56.8
MGA_466	LOCUS_04660	sequence1:298756..299259(-)	internal_stop_codon	298756..298758(-),299443..299445(-)		WP_010989583.1	cation-translocating P-type ATPase	100.0	19.1	49.1
MGA_467	LOCUS_04670	sequence1:299443..299715(-)	internal_stop_codon	299743..299745(-),299731..299733(-),299443..299445(-)		WP_011948276.1	calcium-translocating P-type ATPase, SERCA-type	97.8	10.9	58.9
MGA_468	LOCUS_04680	sequence1:299743..300597(-)	internal_stop_codon	299743..299745(-),299731..299733(-)		WP_011949094.1	cation-translocating P-type ATPase	89.4	27.4	39.2
MGA_471	LOCUS_04710	sequence1:301815..302051(+)	internal_stop_codon	301752..301754(+),302085..302087(+),302049..302051(+),302223..302225(+)		WP_011460907.1	valine--tRNA ligase	97.4	8.5	59.2
MGA_472	LOCUS_04720	sequence1:302262..302774(+)	internal_stop_codon	302085..302087(+),303009..303011(+),302925..302927(+),302223..302225(+),302049..302051(+),302772..302774(+),302901..302903(+),302880..302882(+),302922..302924(+),303057..303059(+),302946..302948(+)		WP_011183252.1	valine--tRNA ligase	100.0	19.6	56.1
MGA_473	LOCUS_04730	sequence1:303168..303401(+)	internal_stop_codon	303009..303011(+),303156..303158(+),302925..302927(+),303420..303422(+),302901..302903(+),303609..303611(+),303078..303080(+),302922..302924(+),303510..303512(+),303057..303059(+),302946..302948(+),303399..303401(+)		WP_000072238.1	valine--tRNA ligase	83.1	7.3	67.2
MGA_476	LOCUS_04760	sequence1:304842..305204(+)	internal_stop_codon	305202..305204(+)		WP_002286189.1	tRNA (guanosine(46)-N7)-methyltransferase TrmB	100.0	54.1	38.3
MGA_487	LOCUS_04870	sequence1:309408..310118(-)	internal_stop_codon	309363..309365(-),309408..309410(-)		WP_002410012.1	radical SAM family heme chaperone HemW	95.8	61.3	30.3
MGA_491	LOCUS_04910	sequence1:311505..312164(+)	internal_stop_codon	311400..311402(+)		WP_011183486.1	nicotinate phosphoribosyltransferase	95.0	59.5	42.9
MGA_493	LOCUS_04930	sequence1:312531..313007(+)	internal_stop_codon	313005..313007(+)		WP_011166776.1	arginine--tRNA ligase	82.9	23.8	41.9
MGA_495	LOCUS_04950	sequence1:313536..313745(+)	internal_stop_codon	313320..313322(+),313398..313400(+),313743..313745(+)		WP_000557124.1	arginine--tRNA ligase	100.0	12.8	55.1
MGA_496	LOCUS_04960	sequence1:313764..314114(+)	internal_stop_codon	314112..314114(+),313743..313745(+)		WP_001086456.1	arginine--tRNA ligase	99.1	21.6	41.3
MGA_497	LOCUS_04970	sequence1:314186..314617(+)	internal_stop_codon	314615..314617(+)		WP_010874785.1	phosphoglycerate kinase	93.7	31.5	44.8
MGA_498	LOCUS_04980	sequence1:314651..315454(+)	internal_stop_codon	314615..314617(+)		WP_002357094.1	phosphoglycerate kinase	96.3	64.2	40.3
MGA_500	LOCUS_05000	sequence1:316755..317342(+)	internal_stop_codon	316701..316703(+)		WP_010874419.1	purine-nucleoside phosphorylase	100.0	81.5	47.7
MGA_502	LOCUS_05020	sequence1:317930..318124(+)	internal_stop_codon	318122..318124(+)		WP_003640696.1	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	82.8	6.9	50.9
MGA_503	LOCUS_05030	sequence1:318128..318601(+)	internal_stop_codon	318857..318859(+),318599..318601(+),318122..318124(+)		WP_010874753.1	RelA/SpoT family protein	99.4	20.7	45.9
MGA_508	LOCUS_05080	sequence1:320086..320781(+)	internal_stop_codon	320779..320781(+),320929..320931(+)		WP_011921913.1	CTP synthase	97.4	42.1	58.2
MGA_512	LOCUS_05120	sequence1:321703..321930(+)	internal_stop_codon	321928..321930(+)		WP_012583333.1	histidine--tRNA ligase	92.0	16.8	46.4
MGA_513	LOCUS_05130	sequence1:322021..322233(+)	internal_stop_codon	321928..321930(+),322231..322233(+)		WP_012583333.1	histidine--tRNA ligase	84.3	14.4	64.4
MGA_514	LOCUS_05140	sequence1:322243..322881(+)	internal_stop_codon	322879..322881(+),322231..322233(+)		WP_003547037.1	histidine--tRNA ligase	98.6	48.8	39.5
MGA_515	LOCUS_05150	sequence1:323055..324008(+)	internal_stop_codon	323034..323036(+),324240..324242(+),324006..324008(+),324228..324230(+)		WP_012048075.1	aspartate--tRNA ligase	100.0	54.3	49.1
MGA_516	LOCUS_05160	sequence1:324303..324707(+)	internal_stop_codon	324240..324242(+),324228..324230(+)		WP_011183263.1	aspartate--tRNA ligase	97.0	22.5	51.5
MGA_519	LOCUS_05190	sequence1:325877..326074(+)	internal_stop_codon	325592..325594(+),325613..325615(+)		WP_011182947.1	peptide-methionine (S)-S-oxide reductase MsrA	89.2	35.6	58.6
MGA_532	LOCUS_05320	sequence1:338756..339130(+)	internal_stop_codon	339368..339370(+),339128..339130(+),338753..338755(+)		WP_010874834.1	YebC/PmpR family DNA-binding transcriptional regulator	99.2	52.3	52.0
MGA_534	LOCUS_05340	sequence1:340203..340616(-)	partial			WP_003700298.1	Holliday junction resolvase RecU	95.6	65.7	36.4
MGA_535	LOCUS_05350	sequence1:340759..341064(+)	internal_stop_codon	341221..341223(+),341062..341064(+),341236..341238(+)		WP_010874386.1	elongation factor P	99.0	53.2	61.4
MGA_556	LOCUS_05560	sequence1:358855..359199(-)	internal_stop_codon	358768..358770(-),358855..358857(-)		WP_010874884.1	inorganic diphosphatase	98.2	60.9	64.3
MGA_561	LOCUS_05610	sequence1:361022..361333(+)	internal_stop_codon	361010..361012(+),361568..361570(+),361331..361333(+)		WP_010874437.1	ABC transporter permease	90.3	6.6	40.4
MGA_570	LOCUS_05700	sequence1:366467..367978(+)	internal_stop_codon	367976..367978(+)		WP_011166542.1	translation initiation factor IF-2	99.2	81.9	53.3
MGA_571	LOCUS_05710	sequence1:367979..368311(+)	internal_stop_codon	367976..367978(+)		WP_000043635.1	translation initiation factor IF-2	95.5	14.9	55.2
MGA_587	LOCUS_05870	sequence1:378265..378540(-)	internal_stop_codon	378190..378192(-),378547..378549(-),378265..378267(-)		WP_011183203.1	uridine kinase	95.6	41.8	47.1
MGA_588	LOCUS_05880	sequence1:378547..378753(-)	internal_stop_codon	378547..378549(-),378265..378267(-)		WP_003546365.1	uridine kinase	95.6	31.1	49.2
MGA_598	LOCUS_05980	sequence1:385843..386454(+)	internal_stop_codon	386473..386475(+),386452..386454(+)		WP_010874790.1	molecular chaperone DnaK	98.0	34.3	72.1
MGA_599	LOCUS_05990	sequence1:386527..387654(+)	internal_stop_codon	386473..386475(+),386452..386454(+)		WP_011183314.1	molecular chaperone DnaK	96.5	61.1	53.0
MGA_609	LOCUS_06090	sequence1:392737..393471(+)	partial			WP_010874658.1	SMC-Scp complex subunit ScpB	70.5	83.7	42.0
MGA_611	LOCUS_06110	sequence1:393977..394462(+)	internal_stop_codon	394460..394462(+)		WP_010965929.1	trigger factor	93.8	34.6	45.0
MGA_613	LOCUS_06130	sequence1:395062..395979(+)	internal_stop_codon	395995..395997(+),395977..395979(+)		WP_010874688.1	endopeptidase La	100.0	39.7	29.5
MGA_614	LOCUS_06140	sequence1:396028..397437(+)	internal_stop_codon	395995..395997(+),395977..395979(+)		WP_010874688.1	endopeptidase La	98.1	56.9	60.9
MGA_615	LOCUS_06150	sequence1:397523..398275(+)	internal_stop_codon	398276..398278(+),398273..398275(+)		WP_011183167.1	sigma-70 family RNA polymerase sigma factor	72.4	43.1	37.4
MGA_616	LOCUS_06160	sequence1:398342..398869(+)	internal_stop_codon	398276..398278(+),398273..398275(+)		WP_010874708.1	RNA polymerase sigma factor	90.3	30.3	47.5
MGA_623	LOCUS_06230	sequence1:402469..402663(+)	internal_stop_codon	402346..402348(+)		WP_003022450.1	tRNA pseudouridine(55) synthase TruB	98.4	20.2	42.9
MGA_624	LOCUS_06240	sequence1:402653..403504(+)	partial			WP_012583574.1	bifunctional riboflavin kinase/FAD synthetase	98.6	56.7	29.6
MGA_645	LOCUS_06450	sequence1:412042..413169(-)	internal_stop_codon	412042..412044(-)		WP_011166693.1	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase	99.5	78.1	44.3
MGA_646	LOCUS_06460	sequence1:413252..413455(-)	internal_stop_codon	413519..413521(-),413252..413254(-)		WP_011167158.1	aspartate--ammonia ligase	100.0	20.2	61.2
MGA_647	LOCUS_06470	sequence1:413954..414190(-)	internal_stop_codon	413834..413836(-),413828..413830(-),413954..413956(-)		WP_000284917.1	aspartate--ammonia ligase	89.7	21.4	48.6
MGA_648	LOCUS_06480	sequence1:414294..414824(-)	internal_stop_codon	414294..414296(-)		WP_020863053.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	77.8	66.7	46.4
MGA_649	LOCUS_06490	sequence1:414949..415473(-)	internal_stop_codon	414949..414951(-),415474..415476(-),415699..415701(-)		WP_011166290.1	asparagine--tRNA ligase	100.0	38.5	54.6
MGA_650	LOCUS_06500	sequence1:415474..415686(-)	internal_stop_codon	415474..415476(-),415957..415959(-),415699..415701(-)		WP_110460183.1	asparagine--tRNA ligase	100.0	16.4	62.2
MGA_653	LOCUS_06530	sequence1:417026..417688(-)	internal_stop_codon	417875..417877(-),417734..417736(-)		WP_020862867.1	DUF2130 domain-containing protein	90.5	40.6	30.4
MGA_656	LOCUS_06560	sequence1:418734..419729(+)	internal_stop_codon	419736..419738(+),419727..419729(+)		WP_012583823.1	pyrimidine-nucleoside phosphorylase	93.4	71.2	47.1
MGA_657	LOCUS_06570	sequence1:419850..420092(+)	partial			WP_011183016.1	thymidine phosphorylase	100.0	18.2	41.2
MGA_658	LOCUS_06580	sequence1:420813..421124(+)	internal_stop_codon	421122..421124(+),420594..420596(+),420726..420728(+)		WP_011166380.1	alanine--tRNA ligase	87.4	10.3	57.6
MGA_659	LOCUS_06590	sequence1:421158..421538(+)	internal_stop_codon	421536..421538(+),421122..421124(+)		WP_010874775.1	alanine--tRNA ligase	96.8	13.2	40.2
MGA_660	LOCUS_06600	sequence1:421581..422225(+)	internal_stop_codon	421536..421538(+),422223..422225(+)		WP_010874775.1	alanine--tRNA ligase	99.1	23.9	41.2
MGA_663	LOCUS_06630	sequence1:423406..423528(+)	internal_stop_codon	423325..423327(+),423526..423528(+),423763..423765(+),423337..423339(+),423694..423696(+)		WP_003643180.1	leucine--tRNA ligase	100.0	5.0	80.0
MGA_664	LOCUS_06640	sequence1:423997..424269(+)	internal_stop_codon	424543..424545(+),423970..423972(+),424267..424269(+),423763..423765(+),423877..423879(+)		WP_011108648.1	leucine--tRNA ligase	100.0	9.5	48.9
MGA_665	LOCUS_06650	sequence1:424288..424545(+)	internal_stop_codon	424543..424545(+),424267..424269(+),424780..424782(+),424765..424767(+),424705..424707(+),424567..424569(+)		WP_011475758.1	leucine--tRNA ligase	98.8	10.7	48.8
MGA_666	LOCUS_06660	sequence1:424948..425151(+)	internal_stop_codon	424705..424707(+),424936..424938(+),425182..425184(+),424867..424869(+),424780..424782(+),424765..424767(+),425149..425151(+)		WP_000009455.1	leucine--tRNA ligase	98.5	8.2	84.8
MGA_667	LOCUS_06670	sequence1:425344..425715(+)	internal_stop_codon	425149..425151(+),425182..425184(+)		WP_003246072.1	leucine--tRNA ligase	83.7	12.9	41.3
MGA_668	LOCUS_06680	sequence1:425915..426532(-)	frameshift		426717,426578,426757	WP_042733551.1	IS3 family transposase	97.1	46.9	62.5
MGA_673	LOCUS_06730	sequence1:430789..431661(+)	frameshift,internal_stop_codon	431659..431661(+)	431901	WP_010874391.1	DNA polymerase III subunit alpha	82.8	16.6	35.2
MGA_674	LOCUS_06740	sequence1:431701..431940(+)	internal_stop_codon	431659..431661(+),431938..431940(+)		WP_011183185.1	PolC-type DNA polymerase III	93.7	5.4	39.5
MGA_675	LOCUS_06750	sequence1:431980..432522(+)	internal_stop_codon	431938..431940(+),432520..432522(+),432715..432717(+)		WP_011183185.1	PolC-type DNA polymerase III	97.8	12.5	28.5
MGA_676	LOCUS_06760	sequence1:432556..432717(+)	internal_stop_codon	432715..432717(+),432520..432522(+)		WP_011183185.1	PolC-type DNA polymerase III	100.0	3.5	54.7
MGA_677	LOCUS_06770	sequence1:432745..433338(+)	internal_stop_codon	432715..432717(+),433336..433338(+)		WP_204669935.1	PolC-type DNA polymerase III	99.0	13.6	55.8
MGA_678	LOCUS_06780	sequence1:433468..433674(+)	internal_stop_codon	433336..433338(+),433960..433962(+),433672..433674(+),433873..433875(+),433948..433950(+)		WP_011183185.1	PolC-type DNA polymerase III	97.1	4.4	66.7
MGA_679	LOCUS_06790	sequence1:433711..433875(+)	internal_stop_codon	433948..433950(+),433960..433962(+),433672..433674(+),433873..433875(+)		WP_004081285.1	DNA polymerase III subunit alpha	98.1	3.9	56.6
MGA_680	LOCUS_06800	sequence1:434161..434457(+)	internal_stop_codon	433948..433950(+),433960..433962(+),433873..433875(+)		WP_011166548.1	PolC-type DNA polymerase III	96.9	6.6	46.9
MGA_689	LOCUS_06890	sequence1:437769..439217(-)	internal_stop_codon	439461..439463(-)		WP_002357701.1	excinuclease ABC subunit UvrC	99.6	81.4	33.0
MGA_690	LOCUS_06900	sequence1:439523..439834(-)	partial			WP_011815279.1	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	73.8	22.7	36.4
MGA_691	LOCUS_06910	sequence1:439982..440497(-)	internal_stop_codon	439982..439984(-)		WP_010965019.1	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	100.0	50.9	29.2
MGA_692	LOCUS_06920	sequence1:440538..440783(-)	internal_stop_codon	440949..440951(-),440538..440540(-),440868..440870(-)		WP_010874831.1	ribosome biogenesis GTPase Der	98.8	17.8	62.5
MGA_693	LOCUS_06930	sequence1:440949..441680(-)	internal_stop_codon	440949..440951(-),441696..441698(-),440868..440870(-)		WP_010874831.1	ribosome biogenesis GTPase Der	99.2	54.8	49.8
MGA_694	LOCUS_06940	sequence1:441696..441833(-)	internal_stop_codon	441696..441698(-)		WP_011166596.1	ribosome biogenesis GTPase Der	88.9	9.2	72.5
MGA_699	LOCUS_06990	sequence1:443569..443937(+)	internal_stop_codon	443935..443937(+)		WP_011949033.1	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	100.0	39.2	56.6
MGA_700	LOCUS_07000	sequence1:443944..444495(+)	internal_stop_codon	443935..443937(+)		WP_010905597.1	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	96.7	56.8	45.0
MGA_705	LOCUS_07050	sequence1:447142..448134(+)	partial			WP_010874510.1	AAA domain-containing protein	70.3	20.8	30.3
MGA_708	LOCUS_07080	sequence1:449308..450384(+)	internal_stop_codon	449278..449280(+)		WP_010874510.1	AAA domain-containing protein	79.6	26.5	38.0
MGA_711	LOCUS_07110	sequence1:451508..452134(+)	internal_stop_codon	452132..452134(+)		WP_010874888.1	chaperone protein ClpB	94.7	27.7	72.7
MGA_712	LOCUS_07120	sequence1:452219..453505(+)	internal_stop_codon	452132..452134(+),453503..453505(+)		WP_010874888.1	chaperone protein ClpB	100.0	60.3	49.1
MGA_713	LOCUS_07130	sequence1:453830..454132(+)	internal_stop_codon	454130..454132(+),454283..454285(+)		WP_011166520.1	ABC transporter permease	90.0	14.4	40.7
MGA_714	LOCUS_07140	sequence1:454301..454597(+)	internal_stop_codon	454130..454132(+),454595..454597(+),454283..454285(+)		WP_011167069.1	ABC transporter permease	100.0	20.1	32.7
MGA_721	LOCUS_07210	sequence1:457197..457583(-)	internal_stop_codon	457197..457199(-)		WP_002386662.1	ribonuclease HIII	71.9	29.8	42.4
MGA_727	LOCUS_07270	sequence1:460129..460581(-)	partial			WP_053095240.1	iron ABC transporter permease	84.0	40.1	29.2
MGA_731	LOCUS_07310	sequence1:462259..463008(-)	internal_stop_codon	463147..463149(-)		WP_202943733.1	tRNA 2-thiouridine(34) synthase MnmA	94.0	63.7	47.5
MGA_732	LOCUS_07320	sequence1:463147..463416(-)	internal_stop_codon	463147..463149(-)		WP_202943733.1	tRNA 2-thiouridine(34) synthase MnmA	95.5	22.5	54.1
MGA_735	LOCUS_07350	sequence1:464910..465458(-)	partial			WP_085938409.1	IS256 family transposase	80.2	35.9	28.6
MGA_742	LOCUS_07420	sequence1:472129..472404(+)	internal_stop_codon	472402..472404(+),471913..471915(+),472564..472566(+),472588..472590(+),471898..471900(+),472696..472698(+),472054..472056(+)		WP_010874876.1	isoleucine--tRNA ligase	100.0	10.7	40.2
MGA_743	LOCUS_07430	sequence1:473914..474444(+)	internal_stop_codon	474442..474444(+)		WP_010874416.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	100.0	54.9	48.0
MGA_744	LOCUS_07440	sequence1:474876..475112(+)	internal_stop_codon	475110..475112(+)		WP_003229102.1	methionine adenosyltransferase	87.2	17.0	60.3
MGA_745	LOCUS_07450	sequence1:475284..475718(+)	internal_stop_codon	475716..475718(+),475917..475919(+),475110..475112(+),475983..475985(+)		WP_011166676.1	methionine adenosyltransferase	100.0	37.7	57.5
MGA_746	LOCUS_07460	sequence1:476233..476748(-)	internal_stop_codon	476794..476796(-)		WP_010874736.1	DNA-formamidopyrimidine glycosylase	98.8	61.0	53.8
MGA_747	LOCUS_07470	sequence1:476794..477060(-)	internal_stop_codon	476794..476796(-)		WP_010874736.1	DNA-formamidopyrimidine glycosylase	97.7	31.0	51.2
MGA_748	LOCUS_07480	sequence1:477102..477875(-)	internal_stop_codon	477894..477896(-)		WP_010874735.1	5'-3' exonuclease	93.4	82.5	41.2
MGA_750	LOCUS_07500	sequence1:478827..479069(-)	internal_stop_codon	479130..479132(-),478827..478829(-)		WP_011166855.1	DNA polymerase III subunit alpha	100.0	8.1	43.8
MGA_751	LOCUS_07510	sequence1:479130..480605(-)	internal_stop_codon	480618..480620(-),479130..479132(-),480609..480611(-)		WP_011166855.1	DNA polymerase III subunit alpha	92.5	45.8	43.3
MGA_752	LOCUS_07520	sequence1:480618..480884(-)	partial			WP_011017116.1	DNA polymerase III subunit alpha	98.9	8.2	41.9
MGA_755	LOCUS_07550	sequence1:481604..482146(-)	internal_stop_codon	481460..481462(-),481433..481435(-),481604..481606(-),481385..481387(-)		WP_010874906.1	bifunctional oligoribonuclease/PAP phosphatase NrnA	90.6	49.8	37.4
MGA_757	LOCUS_07570	sequence1:483419..483592(-)	internal_stop_codon	483419..483421(-),483650..483652(-)		WP_010874908.1	YqaJ viral recombinase family protein	98.2	19.9	44.6
MGA_758	LOCUS_07580	sequence1:483650..484009(-)	internal_stop_codon	483650..483652(-),483419..483421(-),484013..484015(-)		WP_010874908.1	YqaJ viral recombinase family protein	97.5	41.6	48.7
MGA_761	LOCUS_07610	sequence1:485028..485870(+)	internal_stop_codon	485868..485870(+)		WP_010874481.1	heat-inducible transcriptional repressor HrcA	94.6	74.6	39.6
MGA_762	LOCUS_07620	sequence1:485916..486101(+)	internal_stop_codon	485868..485870(+)		WP_010874481.1	heat-inducible transcriptional repressor HrcA	83.6	15.4	51.9
MGA_765	LOCUS_07650	sequence1:486840..487010(+)	internal_stop_codon	486720..486722(+),486705..486707(+),487008..487010(+)		WP_000775316.1	DUF402 domain-containing protein	89.3	28.2	50.0
MGA_773	LOCUS_07730	sequence1:492370..492816(-)	internal_stop_codon	492829..492831(-)		WP_000565254.1	urease accessory protein UreF	97.3	62.0	42.4
MGA_774	LOCUS_07740	sequence1:492829..493122(-)	internal_stop_codon	492829..492831(-)		WP_001832407.1	urease accessory protein UreF	66.0	27.9	46.9
MGA_776	LOCUS_07760	sequence1:493776..494009(-)	internal_stop_codon	494232..494234(-),493776..493778(-),494052..494054(-)		WP_003243090.1	urease subunit alpha	98.7	13.4	48.7
MGA_777	LOCUS_07770	sequence1:494052..494228(-)	internal_stop_codon	494232..494234(-),493776..493778(-),494052..494054(-)		WP_014206084.1	urease subunit alpha	96.6	9.9	75.0
MGA_778	LOCUS_07780	sequence1:494232..494570(-)	internal_stop_codon	494826..494828(-),494232..494234(-),494052..494054(-),494691..494693(-)		WP_012066606.1	urease subunit alpha	100.0	19.6	74.1
MGA_779	LOCUS_07790	sequence1:494943..495212(-)	internal_stop_codon	494826..494828(-),495288..495290(-),494691..494693(-),494943..494945(-)		WP_011013378.1	urease subunit alpha	100.0	14.7	53.9
MGA_780	LOCUS_07800	sequence1:495459..495794(-)	partial			WP_000779223.1	urease subunit alpha	91.0	38.7	48.5
MGA_782	LOCUS_07820	sequence1:496448..496804(+)	partial			WP_005477430.1	Fe(3+) dicitrate ABC transporter ATP-binding protein FecE	55.9	26.0	45.5
MGA_783	LOCUS_07830	sequence1:497000..497611(+)	partial			WP_000018231.1	ABC transporter ATP-binding protein	72.9	55.3	38.5
MGA_786	LOCUS_07860	sequence1:499521..499850(-)	partial			WP_012583960.1	Holliday junction branch migration DNA helicase RuvB	97.2	34.1	38.6
MGA_801	LOCUS_08010	sequence1:508284..508658(+)	internal_stop_codon	508206..508208(+)		WP_000187233.1	restriction endonuclease subunit S	97.6	23.2	47.1
MGA_803	LOCUS_08030	sequence1:509821..510249(-)	partial			WP_005790555.1	Holliday junction branch migration protein RuvA	78.9	54.2	34.8
MGA_808	LOCUS_08080	sequence1:512647..513414(-)	internal_stop_codon	513457..513459(-),513589..513591(-)		WP_011107525.1	proline--tRNA ligase	100.0	53.5	40.1
MGA_809	LOCUS_08090	sequence1:513589..513861(-)	internal_stop_codon	513931..513933(-),514012..514014(-),513457..513459(-),513589..513591(-),513922..513924(-)		WP_011166523.1	proline--tRNA ligase	97.8	18.6	62.5
MGA_811	LOCUS_08110	sequence1:514545..515285(-)	internal_stop_codon	515391..515393(-)		WP_011166685.1	aminotransferase class V-fold PLP-dependent enzyme	96.7	59.2	38.5
MGA_812	LOCUS_08120	sequence1:515391..515570(-)	internal_stop_codon	515391..515393(-),515724..515726(-)		WP_011183145.1	aminotransferase class V-fold PLP-dependent enzyme	100.0	14.7	53.3
MGA_818	LOCUS_08180	sequence1:520137..521825(-)	internal_stop_codon	521913..521915(-)		WP_011016058.1	phenylalanine--tRNA ligase subunit beta	86.5	63.2	26.6
MGA_821	LOCUS_08210	sequence1:522487..522660(-)	internal_stop_codon	522826..522828(-),522862..522864(-),522670..522672(-)		WP_003736387.1	phenylalanine--tRNA ligase subunit alpha	100.0	16.6	50.0
MGA_822	LOCUS_08220	sequence1:522862..523221(-)	internal_stop_codon	522826..522828(-),522862..522864(-),523234..523236(-),522670..522672(-)		WP_011166773.1	phenylalanine--tRNA ligase subunit alpha	88.2	31.4	45.5
MGA_825	LOCUS_08250	sequence1:524988..525773(-)	internal_stop_codon	525972..525974(-),525903..525905(-)		WP_010874920.1	GTPase ObgE	81.6	49.2	53.1
MGA_831	LOCUS_08310	sequence1:529497..529616(+)	internal_stop_codon	529614..529616(+),529878..529880(+)		WP_003226808.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	94.9	5.8	78.4
MGA_832	LOCUS_08320	sequence1:529647..529880(+)	internal_stop_codon	529614..529616(+),529878..529880(+)		WP_005458663.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	94.8	9.1	63.0
MGA_833	LOCUS_08330	sequence1:530286..530576(+)	internal_stop_codon	530574..530576(+)		WP_003640557.1	DNA topoisomerase IV subunit B	100.0	14.4	56.2
MGA_834	LOCUS_08340	sequence1:530643..531359(+)	internal_stop_codon	530574..530576(+),531357..531359(+)		WP_000037256.1	DNA topoisomerase IV subunit B	99.6	37.1	59.3
MGA_835	LOCUS_08350	sequence1:531431..531718(+)	internal_stop_codon	531716..531718(+)		WP_011166695.1	DNA topoisomerase IV subunit A	92.6	9.8	75.0
MGA_836	LOCUS_08360	sequence1:531743..532759(+)	internal_stop_codon	532757..532759(+),531716..531718(+)		WP_003231550.1	DNA topoisomerase IV subunit A	100.0	41.9	49.7
MGA_837	LOCUS_08370	sequence1:532841..533152(+)	internal_stop_codon	532757..532759(+),533150..533152(+)		WP_011166695.1	DNA topoisomerase IV subunit A	98.1	11.2	26.7
MGA_840	LOCUS_08400	sequence1:535095..535472(+)	internal_stop_codon	535470..535472(+)		WP_003360011.1	nicotinate-nucleotide adenylyltransferase	90.4	50.7	37.2
MGA_842	LOCUS_08420	sequence1:536283..536699(+)	internal_stop_codon	536697..536699(+)		WP_010965416.1	5'-methylthioadenosine/adenosylhomocysteine nucleosidase	83.3	50.4	32.5
MGA_859	LOCUS_08590	sequence1:548733..548963(-)	partial			WP_011202294.1	site-specific DNA-methyltransferase	88.2	11.5	56.7
MGA_860	LOCUS_08600	sequence1:549183..549596(-)	internal_stop_codon	549603..549605(-)		WP_211204934.1	site-specific DNA-methyltransferase	99.3	25.9	42.0
MGA_896	LOCUS_08960	sequence1:580367..581002(-)	partial			WP_010874847.1	hypothetical protein	72.5	29.1	38.6
MGA_911	LOCUS_09110	sequence1:590987..591274(+)	internal_stop_codon	590960..590962(+),590762..590764(+),591272..591274(+)		WP_011166648.1	glycine--tRNA ligase	98.9	20.6	75.5
MGA_912	LOCUS_09120	sequence1:591299..591955(+)	internal_stop_codon	591272..591274(+)		WP_011183165.1	glycine--tRNA ligase	94.0	44.6	51.2
MGA_914	LOCUS_09140	sequence1:592765..593703(+)	partial			WP_009896376.1	DNA primase	93.9	51.3	25.6
MGA_938	LOCUS_09380	sequence1:616441..616896(-)	internal_stop_codon	617086..617088(-),617023..617025(-)		WP_010874705.1	TIGR00282 family metallophosphoesterase	70.9	38.8	50.5
MGA_939	LOCUS_09390	sequence1:617086..617232(-)	internal_stop_codon	617086..617088(-),617023..617025(-)		WP_010874705.1	TIGR00282 family metallophosphoesterase	97.9	16.7	53.2
MGA_940	LOCUS_09400	sequence1:617236..618426(-)	internal_stop_codon	618448..618450(-),618661..618663(-)		WP_000992924.1	DNA helicase PcrA	96.0	51.5	32.8
MGA_941	LOCUS_09410	sequence1:618817..619467(-)	internal_stop_codon	618661..618663(-),618817..618819(-)		WP_002363179.1	DNA helicase PcrA	94.9	26.5	44.4
MGA_949	LOCUS_09490	sequence1:625189..625398(-)	internal_stop_codon	625495..625497(-),625429..625431(-),625474..625476(-)		WP_010874929.1	leucyl aminopeptidase	94.2	14.6	55.4
MGA_950	LOCUS_09500	sequence1:625495..625818(-)	internal_stop_codon	625495..625497(-),625429..625431(-),625474..625476(-),625819..625821(-)		WP_010874929.1	leucyl aminopeptidase	100.0	24.0	64.5
MGA_951	LOCUS_09510	sequence1:625819..626556(-)	internal_stop_codon	625819..625821(-)		WP_011182967.1	M17 family metallopeptidase	83.3	44.9	27.7
MGA_958	LOCUS_09580	sequence1:629451..630659(-)	internal_stop_codon	629451..629453(-)		WP_010874978.1	RNase J family beta-CASP ribonuclease	98.5	70.8	46.2
MGA_959	LOCUS_09590	sequence1:630799..631677(+)	partial			WP_010874928.1	peptidase domain-containing ABC transporter	99.3	43.2	27.6
MGA_962	LOCUS_09620	sequence1:633104..633343(-)	internal_stop_codon	633368..633370(-),633365..633367(-)		WP_011183183.1	phosphatidate cytidylyltransferase	68.4	15.4	57.4
MGA_963	LOCUS_09630	sequence1:633368..633655(-)	internal_stop_codon	633368..633370(-),633365..633367(-)		WP_011183183.1	phosphatidate cytidylyltransferase	53.7	15.1	56.6
MGA_965	LOCUS_09650	sequence1:634820..635338(-)	internal_stop_codon	635366..635368(-)		WP_000057330.1	UMP kinase	100.0	71.7	45.3
MGA_967	LOCUS_09670	sequence1:635893..636306(-)	internal_stop_codon	635893..635895(-),636373..636375(-)		WP_003231929.1	translation elongation factor Ts	99.3	47.1	34.1
MGA_970	LOCUS_09700	sequence1:638642..639418(+)	internal_stop_codon	639416..639418(+)		WP_011861724.1	iron ABC transporter permease	92.6	69.7	24.1
MGA_982	LOCUS_09820	sequence1:645738..646091(-)	internal_stop_codon	645738..645740(-),646101..646103(-),645723..645725(-),646092..646094(-),645696..645698(-),646236..646238(-)		WP_010874554.1	oligoendopeptidase F	100.0	19.3	55.1
MGA_986	LOCUS_09860	sequence1:647227..647631(-)	internal_stop_codon	647815..647817(-),647857..647859(-)		WP_003806883.1	elongation factor Tu	97.8	33.1	72.5
MGA_987	LOCUS_09870	sequence1:647857..648411(-)	internal_stop_codon	647815..647817(-),647857..647859(-)		WP_011125813.1	elongation factor Tu	98.9	45.6	78.0
MGA_988	LOCUS_09880	sequence1:648548..648997(-)	internal_stop_codon	649097..649099(-)		WP_010874584.1	elongation factor G	96.0	20.8	70.6
MGA_989	LOCUS_09890	sequence1:649097..650212(-)	internal_stop_codon	650465..650467(-),649097..649099(-),650405..650407(-),650261..650263(-)		WP_011183519.1	elongation factor G	100.0	53.8	66.6
MGA_990	LOCUS_09900	sequence1:650465..650614(-)	internal_stop_codon	650465..650467(-),650405..650407(-),650261..650263(-)		WP_014538014.1	elongation factor G	91.8	6.4	86.7
MGA_991	LOCUS_09910	sequence1:650644..650766(-)	internal_stop_codon	650803..650805(-)		WP_010874583.1	30S ribosomal protein S7	100.0	25.8	85.0
MGA_992	LOCUS_09920	sequence1:650803..651108(-)	internal_stop_codon	650803..650805(-)		WP_001137495.1	30S ribosomal protein S7	99.0	64.1	67.0
MGA_1001	LOCUS_10010	sequence1:659065..659445(-)	internal_stop_codon	659452..659454(-)		WP_010965634.1	phospho-sugar mutase	99.2	22.6	32.8
MGA_1002	LOCUS_10020	sequence1:659452..660189(-)	internal_stop_codon	660361..660363(-),659452..659454(-)		WP_011183017.1	phospho-sugar mutase	100.0	44.2	34.3
MGA_1004	LOCUS_10040	sequence1:661034..661576(-)	internal_stop_codon	661640..661642(-)		WP_010874826.1	Xaa-Pro peptidase family protein	97.2	49.7	52.8
MGA_1007	LOCUS_10070	sequence1:662649..662939(-)	internal_stop_codon	662649..662651(-),662955..662957(-)		WP_011183074.1	threonine--tRNA ligase	99.0	14.8	65.3
MGA_1008	LOCUS_10080	sequence1:662955..663275(-)	internal_stop_codon	663474..663476(-),663342..663344(-),662955..662957(-)		WP_010874910.1	threonine--tRNA ligase	100.0	18.8	54.7
MGA_1009	LOCUS_10090	sequence1:663657..664082(-)	internal_stop_codon	663474..663476(-),663657..663659(-)		WP_004080983.1	threonine--tRNA ligase	93.6	20.6	44.8
MGA_1013	LOCUS_10130	sequence1:665344..665577(-)	internal_stop_codon	665344..665346(-),665803..665805(-)		WP_012583376.1	tRNA pseudouridine(38-40) synthase TruA	84.4	26.9	43.9
MGA_1014	LOCUS_10140	sequence1:665915..666535(-)	partial			WP_010874552.1	energy-coupling factor transporter transmembrane component T	95.1	45.2	45.4
MGA_1015	LOCUS_10150	sequence1:667043..667231(-)	internal_stop_codon	667043..667045(-),666989..666991(-)		WP_010874552.1	energy-coupling factor transporter transmembrane component T	91.9	13.1	45.6
MGA_1016	LOCUS_10160	sequence1:667232..668104(-)	partial			WP_010874551.1	energy-coupling factor transporter ATPase	71.4	68.3	60.4
MGA_1017	LOCUS_10170	sequence1:668177..668533(-)	partial			WP_010874551.1	energy-coupling factor transporter ATPase	72.0	28.1	44.7
MGA_1018	LOCUS_10180	sequence1:668521..668865(-)	internal_stop_codon	668992..668994(-)		WP_011166888.1	energy-coupling factor transporter ATPase	99.1	27.7	52.2
MGA_1019	LOCUS_10190	sequence1:668992..669405(-)	internal_stop_codon	668992..668994(-)		WP_010874550.1	energy-coupling factor transporter ATPase	84.7	42.0	62.9
MGA_1034	LOCUS_10340	sequence1:678207..678725(-)	internal_stop_codon	678795..678797(-),677967..677969(-),678207..678209(-)		WP_015545356.1	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	100.0	36.1	46.0
MGA_1035	LOCUS_10350	sequence1:678795..679241(-)	internal_stop_codon	678795..678797(-)		WP_014574916.1	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	100.0	31.0	58.4
MGA_1041	LOCUS_10410	sequence1:682030..682185(-)	internal_stop_codon	682198..682200(-)		WP_004186801.1	uracil-DNA glycosylase	88.2	17.4	60.0
MGA_1042	LOCUS_10420	sequence1:682198..682458(-)	internal_stop_codon	682198..682200(-)		WP_011183140.1	uracil-DNA glycosylase	100.0	40.7	44.3
MGA_1048	LOCUS_10480	sequence1:684413..684865(-)	internal_stop_codon	684977..684979(-)		WP_003132465.1	replicative DNA helicase	86.7	24.8	44.3
MGA_1049	LOCUS_10490	sequence1:684977..685663(-)	internal_stop_codon	684977..684979(-)		WP_002858532.1	replicative DNA helicase	83.8	39.7	30.3
MGA_1062	LOCUS_10620	sequence1:692633..693091(-)	internal_stop_codon	692633..692635(-),692561..692563(-)		WP_011167113.1	ABC transporter substrate-binding protein	99.3	15.2	27.7
MGA_1068	LOCUS_10680	sequence1:696521..698281(-)	internal_stop_codon	698312..698314(-),698291..698293(-),696521..696523(-)		WP_011167112.1	PDxFFG protein	73.7	24.3	25.9
MGA_1070	LOCUS_10700	sequence1:698855..699139(-)	internal_stop_codon	698855..698857(-)		WP_020863027.1	ABC transporter ATP-binding protein	100.0	21.4	72.3
MGA_1071	LOCUS_10710	sequence1:699356..700099(-)	internal_stop_codon	699356..699358(-)		WP_011167117.1	ABC transporter ATP-binding protein	83.4	48.0	39.7
MGA_1072	LOCUS_10720	sequence1:700153..700392(-)	internal_stop_codon	700402..700404(-),700426..700428(-)		WP_011167116.1	ABC transporter ATP-binding protein	97.5	16.0	63.6
MGA_1073	LOCUS_10730	sequence1:700426..700863(-)	internal_stop_codon	700402..700404(-),700426..700428(-),700915..700917(-)		WP_011167116.1	ABC transporter ATP-binding protein	100.0	30.1	75.9
MGA_1074	LOCUS_10740	sequence1:700915..701640(-)	internal_stop_codon	700915..700917(-)		WP_011167116.1	ABC transporter ATP-binding protein	49.8	24.5	46.7
MGA_1075	LOCUS_10750	sequence1:701644..701886(-)	internal_stop_codon	702016..702018(-),701923..701925(-)		WP_011167115.1	ABC transporter permease	100.0	23.8	60.0
MGA_1076	LOCUS_10760	sequence1:702016..702165(-)	internal_stop_codon	702244..702246(-),701923..701925(-),702259..702261(-),702016..702018(-)		WP_011167115.1	ABC transporter permease	98.0	14.3	60.4
MGA_1078	LOCUS_10780	sequence1:702647..702835(-)	internal_stop_codon	702914..702916(-)		WP_011167114.1	ABC transporter permease	95.2	16.5	55.9
MGA_1079	LOCUS_10790	sequence1:702914..703120(-)	internal_stop_codon	703295..703297(-),702914..702916(-)		WP_011167114.1	ABC transporter permease	100.0	19.0	61.8
MGA_1091	LOCUS_10910	sequence1:708984..709469(-)	partial			WP_003438534.1	Cof-type HAD-IIB family hydrolase	73.3	47.5	30.4
MGA_1092	LOCUS_10920	sequence1:709488..709817(-)	frameshift,internal_stop_codon	709496..709498(-)	709465,709505	WP_012048269.1	sugar-phosphatase	91.7	36.6	39.8
MGA_1094	LOCUS_10940	sequence1:712169..712633(-)	internal_stop_codon	712769..712771(-),712712..712714(-)		WP_011109210.1	DUF4011 domain-containing protein	59.1	5.7	45.1
MGA_1098	LOCUS_10980	sequence1:714641..715537(-)	partial			WP_010874510.1	AAA domain-containing protein	84.2	22.8	27.3
MGA_1110	LOCUS_11100	sequence1:721669..721833(-)	internal_stop_codon	721885..721887(-),722062..722064(-)		WP_010943505.1	50S ribosomal protein L13	94.4	35.7	56.9
MGA_1119	LOCUS_11190	sequence1:726900..727316(+)	partial			WP_011167111.1	transcription termination/antitermination protein NusG	92.0	59.2	32.8
MGA_1121	LOCUS_11210	sequence1:728199..728441(-)	internal_stop_codon	728460..728462(-),728199..728201(-),728175..728177(-)		WP_003641520.1	DEAD/DEAH box helicase	95.0	17.0	51.3
MGA_1122	LOCUS_11220	sequence1:728460..729044(-)	internal_stop_codon	728460..728462(-),728199..728201(-),728175..728177(-),729105..729107(-)		WP_011183170.1	DEAD/DEAH box helicase	100.0	42.8	41.2
MGA_1128	LOCUS_11280	sequence1:733062..733571(-)	internal_stop_codon	733062..733064(-)		WP_011949107.1	deoxyribose-phosphate aldolase	98.8	78.8	53.3
MGA_1129	LOCUS_11290	sequence1:733721..734617(-)	internal_stop_codon	733718..733720(-),734639..734641(-),733721..733723(-),734867..734869(-)		WP_010874439.1	transketolase	96.6	44.0	42.8
MGA_1130	LOCUS_11300	sequence1:734930..735376(-)	internal_stop_codon	735392..735394(-),734867..734869(-),734930..734932(-)		WP_010874439.1	transketolase	100.0	23.0	53.0
MGA_1131	LOCUS_11310	sequence1:735392..735544(-)	internal_stop_codon	735392..735394(-)		WP_011183246.1	transketolase	98.0	7.5	49.0
MGA_1133	LOCUS_11330	sequence1:735937..736260(-)	internal_stop_codon	736276..736278(-)		WP_000966421.1	cardiolipin synthase	72.9	19.9	34.2
MGA_1137	LOCUS_11370	sequence1:737792..738004(-)	internal_stop_codon	738020..738022(-)		WP_004596708.1	thioredoxin	92.9	61.9	38.5
MGA_1139	LOCUS_11390	sequence1:738141..738368(-)	internal_stop_codon	738510..738512(-)		WP_010874618.1	type I DNA topoisomerase	80.0	9.4	46.3
MGA_1140	LOCUS_11400	sequence1:738510..738692(-)	internal_stop_codon	738510..738512(-)		WP_011143190.1	type I DNA topoisomerase	91.7	7.5	49.1
MGA_1141	LOCUS_11410	sequence1:739008..739295(-)	internal_stop_codon	739329..739331(-),739008..739010(-),738888..738890(-)		WP_010874618.1	type I DNA topoisomerase	100.0	13.5	47.9
MGA_1143	LOCUS_11430	sequence1:739593..739766(-)	internal_stop_codon	739593..739595(-),739887..739889(-)		WP_010940644.1	type I DNA topoisomerase	100.0	7.6	60.3
MGA_1144	LOCUS_11440	sequence1:740019..740186(-)	internal_stop_codon	740019..740021(-),739887..739889(-)		WP_010874618.1	type I DNA topoisomerase	87.3	6.9	42.9
MGA_1146	LOCUS_11460	sequence1:741010..741474(-)	internal_stop_codon	741622..741624(-)		WP_010875013.1	ribosome biogenesis GTPase YlqF	99.4	54.6	35.9
MGA_1147	LOCUS_11470	sequence1:741622..741789(-)	internal_stop_codon	741622..741624(-)		WP_000201282.1	ribosome biogenesis GTPase YlqF	100.0	19.4	50.9
MGA_1149	LOCUS_11490	sequence1:742998..743201(-)	internal_stop_codon	743217..743219(-)		WP_003722138.1	redox-regulated ATPase YchF	97.0	17.8	69.2
MGA_1150	LOCUS_11500	sequence1:743217..744104(-)	internal_stop_codon	743217..743219(-)		WP_002293105.1	redox-regulated ATPase YchF	100.0	80.6	55.9
MGA_1151	LOCUS_11510	sequence1:744115..744387(-)	internal_stop_codon	744430..744432(-)		WP_010964145.1	class II fructose-1,6-bisphosphate aldolase	94.4	29.3	50.6
MGA_1152	LOCUS_11520	sequence1:744430..744816(-)	internal_stop_codon	744430..744432(-),744895..744897(-)		WP_002290335.1	fructose-bisphosphate aldolase	100.0	44.3	53.1
MGA_1156	LOCUS_11560	sequence1:746104..746265(-)	frameshift,internal_stop_codon	746266..746268(-),746104..746106(-)	746461	WP_000262741.1	HD domain-containing protein	83.0	10.1	56.8
MGA_1157	LOCUS_11570	sequence1:746748..747314(-)	internal_stop_codon	747339..747341(-)		WP_000415154.1	glutamate--tRNA ligase	93.1	37.3	32.0
MGA_1158	LOCUS_11580	sequence1:747339..748007(-)	internal_stop_codon	747339..747341(-),748008..748010(-)		WP_010875035.1	glutamate--tRNA ligase	100.0	45.7	58.1
MGA_1159	LOCUS_11590	sequence1:748008..748196(-)	internal_stop_codon	748008..748010(-)		WP_010875035.1	glutamate--tRNA ligase	96.8	12.4	81.7
MGA_1160	LOCUS_11600	sequence1:748417..748983(-)	partial			WP_009894070.1	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	100.0	63.2	26.4
MGA_1161	LOCUS_11610	sequence1:749017..749538(-)	internal_stop_codon	749689..749691(-)		WP_010895968.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA	94.2	59.3	34.9
MGA_1164	LOCUS_11640	sequence1:750242..750523(-)	internal_stop_codon	749972..749974(-),750185..750187(-),750797..750799(-),750578..750580(-),750683..750685(-),750242..750244(-)		WP_010875037.1	membrane protein insertase YidC	97.8	23.6	54.9