{ "type": "genome", "identifier": "GCF_000020385.1", "organism": "Trichlorobacter lovleyi SZ", "title": "Trichlorobacter lovleyi SZ", "description": "na", "data type": "Genome sequencing and assembly", "organization": "US DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000020385.1", "bioproject": "PRJNA224116", "biosample": "SAMN00623044", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "398767", "species_taxid": "313985", "organism_name": "Trichlorobacter lovleyi SZ", "infraspecific_name": "strain=SZ", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2008/06/05", "asm_name": "ASM2038v1", "asm_submitter": "US DOE Joint Genome Institute", "gbrs_paired_asm": "GCA_000020385.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/020/385/GCF_000020385.1_ASM2038v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3994874", "genome_size_ungapped": "3994874", "gc_percent": "54.500000", "replicon_count": "2", "scaffold_count": "2", "contig_count": "2", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_000020385.1-RS_2024_12_09", "annotation_date": "2024-12-09", "total_gene_count": "3748", "protein_coding_gene_count": "3664", "non_coding_gene_count": "54", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2008-06-05", "dateModified": "2008-06-05", "datePublished": "2008-06-05", "_annotation": { "sample_count": 1, "sample_organism": [ "Trichlorobacter lovleyi SZ" ], "sample_taxid": [ "398767" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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"ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Trichlorobacter thiogenes", "strain": "strain=ATCC BAA-34", "accession": "GCA_900167465.1", "taxid": 115783, "species_taxid": 115783, "relation_to_type": "type", "validated": true, "ani": 84.6519, "matched_fragments": 811, "total_fragments": 1330, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pelobacter propionicus", "strain": "strain=DSM 2379", "accession": "GCA_000015045.1", "taxid": 29543, "species_taxid": 29543, "relation_to_type": "type", "validated": true, "ani": 78.2979, "matched_fragments": 190, "total_fragments": 1330, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oryzomonas sagensis", "strain": "strain=Red100", "accession": "GCA_008802355.1", "taxid": 2603857, "species_taxid": 2603857, "relation_to_type": "type", "validated": true, "ani": 77.3613, "matched_fragments": 200, "total_fragments": 1330, "ani_threshold": 95, "status": "below_threshold" }, { 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"vibrio_cell_shape": null, "spiral_cell_shape": null }, "_genome_taxon": [ "Trichlorobacter", "lovleyi", "SZ" ], "quality": 5, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }