# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_1	LOCUS_00010	sequence1:134..1885(+)	partial			WP_007051767.1	chromosomal replication initiator protein DnaA	66.4	77.4	68.9
MGA_9	LOCUS_00090	sequence1:12745..13539(-)	partial			WP_012472051.1	hemolysin III family protein	79.2	72.6	56.5
MGA_15	LOCUS_00150	sequence1:19153..19449(+)	partial			WP_011068744.1	circularly permuted type 2 ATP-grasp protein	34.7	4.7	82.4
MGA_18	LOCUS_00180	sequence1:21820..22662(-)	frameshift		22685	WP_011013327.1	ATP-binding protein	97.9	46.4	32.5
MGA_19	LOCUS_00190	sequence1:22587..23015(-)	frameshift		22685	WP_011013327.1	ATP-binding protein	71.1	18.1	46.1
MGA_30	LOCUS_00300	sequence1:32322..32663(+)	partial			WP_013399551.1	DUF2075 domain-containing protein	69.9	9.8	40.5
MGA_44	LOCUS_00440	sequence1:47081..47329(+)	frameshift		47287	WP_054736140.1	aldo/keto reductase	85.4	24.5	75.7
MGA_45	LOCUS_00450	sequence1:47292..47942(+)	frameshift		47287	WP_054736140.1	aldo/keto reductase	100.0	75.5	80.1
MGA_47	LOCUS_00470	sequence1:50497..50943(-)	internal_stop_codon	51040..51042(-)		WP_003815189.1	aminoglycoside 3'-phosphotransferase	91.9	54.0	48.6
MGA_48	LOCUS_00480	sequence1:51040..51309(-)	internal_stop_codon	51040..51042(-)		WP_003547977.1	aminoglycoside 3'-phosphotransferase	94.4	30.4	41.2
MGA_52	LOCUS_00520	sequence1:55366..57471(-)	partial			WP_040120974.1	beta-galactosidase	67.3	70.6	28.5
MGA_60	LOCUS_00600	sequence1:64454..64741(-)	partial			WP_011068800.1	sugar ABC transporter permease	50.5	11.9	91.7
MGA_61	LOCUS_00610	sequence1:64625..65323(+)	partial			WP_011068796.1	ATP-binding cassette domain-containing protein	82.8	66.3	62.0
MGA_101	LOCUS_01010	sequence1:119432..120979(+)	partial			WP_003812948.1	sel1 repeat family protein	34.0	80.1	38.4
MGA_112	LOCUS_01120	sequence1:130832..131275(-)	partial			WP_011202637.1	carboxymuconolactone decarboxylase family protein	94.6	51.1	60.4
MGA_118	LOCUS_01180	sequence1:136098..136577(-)	partial			WP_014565877.1	flavodoxin	96.9	41.4	41.7
MGA_137	LOCUS_01370	sequence1:157945..158664(+)	partial			WP_010944012.1	ABC transporter substrate-binding protein	93.3	57.8	30.5
MGA_139	LOCUS_01390	sequence1:159541..159999(+)	frameshift		159530,160222,159918	WP_011266443.1	biotin carboxylase N-terminal domain-containing protein	80.9	19.4	48.8
MGA_140	LOCUS_01400	sequence1:160348..161307(+)	partial			WP_164925420.1	DUF4392 domain-containing protein	73.7	79.6	37.3
MGA_150	LOCUS_01500	sequence1:173861..174598(+)	partial			WP_012803793.1	glycoside hydrolase family 2 protein	91.4	24.1	36.6
MGA_160	LOCUS_01600	sequence1:184735..187689(+)	partial			WP_032740909.1	FtsX-like permease family protein	69.4	56.7	55.1
MGA_164	LOCUS_01640	sequence1:189897..191618(-)	frameshift		190130	WP_003857914.1	FtsX-like permease family protein	89.9	57.0	27.8
MGA_165	LOCUS_01650	sequence1:191615..192037(-)	frameshift		192122,192212	WP_003975722.1	ABC transporter ATP-binding protein	80.0	43.8	64.3
MGA_169	LOCUS_01690	sequence1:197237..198763(-)	partial			WP_010905262.1	polysaccharide deacetylase family protein	38.8	52.4	39.5
MGA_244	LOCUS_02440	sequence1:299283..300419(+)	partial			WP_003819800.1	DUF4190 domain-containing protein	42.6	65.1	32.0
MGA_256	LOCUS_02560	sequence1:316615..324705(+)	partial			WP_011068088.1	FctA domain-containing protein	48.9	48.0	26.1
MGA_263	LOCUS_02630	sequence1:328533..331991(+)	partial			WP_013389421.1	evolved beta-galactosidase subunit alpha	80.0	74.6	45.3
MGA_275	LOCUS_02750	sequence1:347619..348320(-)	partial			WP_007057854.1	cell division protein	87.6	69.3	57.3
MGA_350	LOCUS_03480	sequence1:443065..443718(+)	partial			WP_013390238.1	GNAT family protein	83.9	74.6	55.5
MGA_398	LOCUS_03960	sequence1:483571..484017(+)	partial			WP_003819143.1	50S ribosomal protein L17	82.4	71.8	96.7
MGA_421	LOCUS_04190	sequence1:515219..515950(+)	partial			WP_013390138.1	PLP-dependent transferase	85.2	47.6	64.7
MGA_422	LOCUS_04200	sequence1:515878..516123(+)	partial			WP_013390138.1	PLP-dependent transferase	100.0	18.8	66.7
MGA_425	LOCUS_04230	sequence1:520132..521487(+)	partial			WP_010877778.1	C45 family autoproteolytic acyltransferase/hydolase	55.7	42.4	26.8
MGA_433	LOCUS_04310	sequence1:533400..533753(+)	frameshift		533687	WP_011100885.1	zinc-binding dehydrogenase	76.9	27.4	44.4
MGA_434	LOCUS_04320	sequence1:533708..534397(+)	frameshift		533687	WP_011100885.1	zinc-binding dehydrogenase	98.3	67.4	46.7
MGA_455	LOCUS_04530	sequence1:554757..555560(+)	partial			WP_011730861.1	alpha/beta fold hydrolase	70.4	82.8	29.3
MGA_458	LOCUS_04560	sequence1:558611..559420(+)	partial			WP_008783544.1	DUF4194 domain-containing protein	70.6	84.4	54.7
MGA_468	LOCUS_04660	sequence1:573012..573563(+)	partial			WP_003819800.1	DUF4190 domain-containing protein	66.1	57.0	39.3
MGA_469	LOCUS_04670	sequence1:573743..574243(+)	partial			WP_003819800.1	DUF4190 domain-containing protein	87.3	60.9	39.9
MGA_480	LOCUS_04780	sequence1:588958..590268(+)	frameshift		589010	WP_011068787.1	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	94.0	83.7	55.5
MGA_484	LOCUS_04820	sequence1:594172..595041(+)	partial			WP_011068791.1	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase	53.3	32.8	48.1
MGA_495	LOCUS_04930	sequence1:606333..608015(+)	partial			WP_161269931.1	glycoside hydrolase family 43 protein	67.1	57.8	34.6
MGA_519	LOCUS_05170	sequence1:637930..638550(+)	partial			WP_003814886.1	HdeD family acid-resistance protein	91.7	62.8	56.6
MGA_552	LOCUS_05500	sequence1:674115..674342(-)	internal_stop_codon	674364..674366(-)		WP_011675062.1	ClbS/DfsB family four-helix bundle protein	77.3	33.7	55.2
MGA_553	LOCUS_05510	sequence1:674364..674507(-)	internal_stop_codon	674364..674366(-)		WP_002356044.1	ClbS/DfsB family four-helix bundle protein	97.9	27.2	58.7
MGA_586	LOCUS_05840	sequence1:712415..713953(+)	partial			WP_017143394.1	permease	18.9	29.0	40.0
MGA_633	LOCUS_06310	sequence1:769095..769439(-)	frameshift		769446	WP_013389717.1	uracil-DNA glycosylase	95.6	43.4	78.9
MGA_634	LOCUS_06320	sequence1:769327..769815(-)	frameshift		769446	WP_013389717.1	uracil-DNA glycosylase	82.7	57.4	61.8
MGA_639	LOCUS_06370	sequence1:773771..774541(+)	partial			WP_011067905.1	TPM domain-containing protein	67.2	62.7	45.9
MGA_643	LOCUS_06410	sequence1:777723..778853(+)	partial			WP_013389721.1	DUF3027 domain-containing protein	73.4	83.2	57.4
MGA_661	LOCUS_06590	sequence1:802765..803844(+)	frameshift		802920,802881,803821	WP_090422545.1	IS256 family transposase	84.1	72.7	37.3
MGA_687	LOCUS_06850	sequence1:835980..836834(+)	frameshift		836699,835939,836693	WP_013389743.1	hypothetical protein	83.8	63.7	44.1
MGA_689	LOCUS_06870	sequence1:837291..838481(+)	frameshift		838409	WP_013389745.1	hypothetical protein	69.9	76.7	48.2
MGA_710	LOCUS_07080	sequence1:862461..864128(+)	partial			WP_013390015.1	helicase	74.1	60.8	54.2
MGA_741	LOCUS_07390	sequence1:896484..897047(+)	partial			WP_013389969.1	M23 family metallopeptidase	80.2	50.8	44.9
MGA_776	LOCUS_07740	sequence1:927898..928275(+)	frameshift		928448,928473	WP_003094051.1	fluoride efflux transporter CrcB	73.6	73.2	45.2
MGA_802	LOCUS_08000	sequence1:956661..957170(-)	partial			WP_013390163.1	ATP-binding cassette domain-containing protein	96.4	33.2	48.9
MGA_872	LOCUS_08700	sequence1:1039619..1040128(+)	frameshift		1040047	WP_013389819.1	AMP-dependent synthetase/ligase	86.4	21.7	50.0
MGA_873	LOCUS_08710	sequence1:1040056..1041678(+)	frameshift		1040047	WP_013582533.1	AMP-dependent synthetase/ligase	98.3	78.4	76.3
MGA_881	LOCUS_08790	sequence1:1048385..1048996(-)	partial			WP_053545847.1	IS1249 family transposase	59.1	30.6	35.8
MGA_892	LOCUS_08900	sequence1:1061112..1062098(-)	internal_stop_codon	1061112..1061114(-)		WP_180947102.1	type I pullulanase	63.1	9.2	42.0
MGA_893	LOCUS_08910	sequence1:1062151..1062603(-)	internal_stop_codon	1062604..1062606(-)		WP_180947095.1	alpha-amylase family protein	87.3	22.1	43.6
MGA_894	LOCUS_08920	sequence1:1062604..1063134(-)	internal_stop_codon	1063189..1063191(-),1062604..1062606(-),1063147..1063149(-)		WP_164929871.1	alpha-amylase family protein	99.4	32.9	46.9
MGA_901	LOCUS_08990	sequence1:1068310..1069275(+)	partial			WP_074016730.1	GIY-YIG nuclease family protein	38.6	42.0	44.9
MGA_918	LOCUS_09160	sequence1:1086783..1087064(+)	frameshift		1086989	WP_011101954.1	pyridoxal phosphate-dependent aminotransferase	54.8	13.1	56.9
MGA_919	LOCUS_09170	sequence1:1087054..1088004(+)	frameshift		1086989	WP_201247498.1	pyridoxal phosphate-dependent aminotransferase	97.5	78.0	39.9
MGA_921	LOCUS_09190	sequence1:1089100..1090602(-)	partial			WP_005480254.1	alpha-amylase	73.4	72.6	46.5
MGA_932	LOCUS_09300	sequence1:1098770..1098991(-)	partial			WP_010972158.1	GNAT family N-acetyltransferase	93.2	44.7	51.5
MGA_933	LOCUS_09310	sequence1:1099131..1099730(-)	partial			WP_003547510.1	adenylate kinase	68.8	84.7	47.8
MGA_934	LOCUS_09320	sequence1:1099913..1100284(+)	partial			WP_011016570.1	ATP-binding protein	95.9	26.7	45.8
MGA_971	LOCUS_09690	sequence1:1149811..1150746(+)	partial			WP_011068246.1	LCP family protein	92.6	61.0	60.8
MGA_972	LOCUS_09700	sequence1:1151264..1152541(+)	partial			WP_180947074.1	FtsK/SpoIIIE domain-containing protein	98.6	70.0	41.8
MGA_997	LOCUS_09950	sequence1:1178473..1178688(-)	frameshift		1178717	WP_017143606.1	ABC transporter ATP-binding protein	100.0	11.4	73.2
MGA_998	LOCUS_09960	sequence1:1178640..1179119(-)	partial			WP_003814218.1	ABC transporter ATP-binding protein	67.3	23.9	42.1
MGA_999	LOCUS_09970	sequence1:1179353..1179898(-)	internal_stop_codon	1179941..1179943(-)		WP_000567984.1	AAA family ATPase	95.6	73.6	44.6
MGA_1002	LOCUS_10000	sequence1:1180777..1181241(-)	partial			WP_162098249.1	glycosyltransferase	87.7	27.1	45.9
MGA_1021	LOCUS_10190	sequence1:1204872..1205228(+)	partial			WP_013390040.1	cupin domain-containing protein	86.4	50.2	54.9
MGA_1035	LOCUS_10330	sequence1:1223405..1224550(+)	partial			WP_011068209.1	DNA-processing protein DprA	97.9	63.4	48.9
MGA_1050	LOCUS_10480	sequence1:1243049..1243249(-)	partial			WP_218916581.1	SPOR domain-containing protein	95.5	74.1	50.8
MGA_1054	LOCUS_10520	sequence1:1247189..1247692(-)	internal_stop_codon	1247693..1247695(-)		WP_007052046.1	methionine ABC transporter ATP-binding protein	74.9	30.7	57.9
MGA_1055	LOCUS_10530	sequence1:1247693..1248484(-)	internal_stop_codon	1247693..1247695(-)		WP_007052046.1	methionine ABC transporter ATP-binding protein	97.3	64.3	77.5
MGA_1066	LOCUS_10640	sequence1:1265129..1265758(-)	frameshift		1265777	WP_013399531.1	MFS transporter	83.7	44.9	34.1
MGA_1071	LOCUS_10690	sequence1:1271552..1273018(-)	partial			WP_007055162.1	RNA polymerase sigma factor	70.5	72.2	92.4
MGA_1083	LOCUS_10810	sequence1:1287134..1287565(-)	frameshift		1287602	WP_003815448.1	helix-turn-helix transcriptional regulator	98.6	82.9	74.5
MGA_1098	LOCUS_10960	sequence1:1303330..1304145(-)	partial			WP_013390093.1	DUF262 domain-containing protein	97.8	37.9	45.1
MGA_1100	LOCUS_10980	sequence1:1305514..1306827(-)	partial			WP_013390093.1	DUF262 domain-containing protein	97.7	61.6	50.8
MGA_1117	LOCUS_11150	sequence1:1327816..1330650(+)	partial			WP_003975721.1	ABC transporter permease	71.2	75.9	30.1
MGA_1135	LOCUS_11330	sequence1:1348412..1348723(-)	partial			WP_007054435.1	hypothetical protein	46.6	45.3	70.8
MGA_1165	LOCUS_11630	sequence1:1375273..1375620(-)	frameshift		1375852	WP_050760733.1	ABC transporter substrate-binding protein	100.0	20.7	80.0
MGA_1166	LOCUS_11640	sequence1:1375595..1376869(-)	frameshift		1376846,1375855	WP_050760733.1	ABC transporter substrate-binding protein	82.8	62.1	72.1
MGA_1181	LOCUS_11790	sequence1:1395610..1395924(-)	partial			WP_013389656.1	transcriptional regulator NrdR	97.1	65.2	80.2
MGA_1246	LOCUS_12440	sequence1:1470192..1470758(+)	partial			WP_007053268.1	3'-5' exonuclease	89.4	74.0	51.1
MGA_1264	LOCUS_12610	sequence1:1498308..1498859(-)	partial			WP_013363192.1	MarR family transcriptional regulator	73.2	76.3	42.2
MGA_1269	LOCUS_12660	sequence1:1503272..1506325(-)	partial			WP_164930412.1	type I-U CRISPR-associated helicase/endonuclease Cas3	49.1	46.4	25.1
MGA_1274	LOCUS_12710	sequence1:1514476..1519152(-)	partial			WP_013389608.1	acyl-CoA dehydratase activase-related protein	68.6	65.1	81.3
MGA_1282	LOCUS_12790	sequence1:1526894..1527820(-)	frameshift		1527966	WP_013389605.1	endonuclease/exonuclease/phosphatase family protein	98.4	81.7	52.5
MGA_1297	LOCUS_12940	sequence1:1544544..1545254(-)	partial			WP_013389591.1	GNAT family N-acetyltransferase	90.3	72.2	38.0
MGA_1324	LOCUS_13210	sequence1:1594084..1594548(-)	partial			WP_008782692.1	NINE protein	77.9	58.7	43.9
MGA_1337	LOCUS_13340	sequence1:1608681..1610120(+)	partial			WP_002990274.1	DUF2142 domain-containing protein	61.0	61.4	22.9
MGA_1345	LOCUS_13420	sequence1:1619271..1620158(-)	partial			WP_011202149.1	glycosyltransferase family 2 protein	41.7	40.4	31.2
MGA_1346	LOCUS_13430	sequence1:1620177..1621190(-)	partial			WP_000998260.1	glycosyltransferase	72.7	34.6	33.5
MGA_1351	LOCUS_13480	sequence1:1625238..1626170(-)	partial			WP_011101280.1	capsular polysaccharide synthesis protein	74.2	72.7	31.3
MGA_1365	LOCUS_13620	sequence1:1641138..1641638(+)	partial			WP_000578443.1	glycosyltransferase	63.3	64.4	39.0
MGA_1366	LOCUS_13630	sequence1:1641716..1642669(+)	partial			WP_004115801.1	glycosyltransferase	70.0	82.9	28.7
MGA_1383	LOCUS_13800	sequence1:1669953..1670972(+)	partial			WP_004082399.1	glycosyl transferase	86.1	35.4	52.5
MGA_1405	LOCUS_14020	sequence1:1691063..1691965(+)	partial			WP_011222008.1	replication protein	46.7	68.5	28.7
MGA_1407	LOCUS_14040	sequence1:1692196..1693314(-)	partial			WP_025163903.1	DUF262 domain-containing protein	37.6	39.6	31.6
MGA_1408	LOCUS_14050	sequence1:1693314..1694426(-)	partial			WP_196835716.1	adenine-specific methyltransferase EcoRI family protein	83.5	72.3	43.1
MGA_1409	LOCUS_14060	sequence1:1694483..1695703(-)	partial			WP_011860983.1	site-specific integrase	74.6	73.4	28.7
MGA_1415	LOCUS_14120	sequence1:1704882..1710221(-)	partial			WP_000516926.1	VaFE repeat-containing surface-anchored protein	24.8	35.9	30.1
MGA_1434	LOCUS_14310	sequence1:1735862..1736668(-)	partial			WP_009993690.1	ABC transporter permease subunit	83.6	66.0	33.8
MGA_1435	LOCUS_14320	sequence1:1736806..1737591(-)	partial			WP_152349884.1	ATP-binding cassette domain-containing protein	88.5	64.5	64.1
MGA_1438	LOCUS_14350	sequence1:1739476..1740882(+)	partial			WP_011068474.1	HAD-IC family P-type ATPase	30.3	15.7	47.2
MGA_1448	LOCUS_14450	sequence1:1753293..1754204(-)	partial			WP_003811773.1	DUF3152 domain-containing protein	70.6	77.2	45.8
MGA_1451	LOCUS_14480	sequence1:1756403..1756822(-)	partial			WP_013389495.1	zinc-ribbon domain-containing protein	84.9	27.6	41.5
MGA_1454	LOCUS_14510	sequence1:1758288..1758920(-)	partial			WP_003811755.1	single-stranded DNA-binding protein	58.6	52.4	69.1
MGA_1468	LOCUS_14640	sequence1:1782561..1783430(-)	partial			WP_009994355.1	glycoside hydrolase family 25 protein	76.8	35.1	35.8
MGA_1469	LOCUS_14650	sequence1:1783523..1785151(-)	partial			WP_009994355.1	glycoside hydrolase family 25 protein	42.8	35.2	43.2
MGA_1470	LOCUS_14660	sequence1:1785647..1786561(+)	frameshift		1785681,1785674	WP_053543917.1	IS1249 family transposase	92.1	73.4	34.7
MGA_1471	LOCUS_14670	sequence1:1786688..1787248(+)	partial			WP_010990081.1	class 1 internalin InlJ	72.6	18.1	31.6
MGA_1472	LOCUS_14680	sequence1:1787354..1787836(+)	partial			WP_071164528.1	beta-N-acetylglucosaminidase domain-containing protein	75.0	5.9	36.4
MGA_1481	LOCUS_14770	sequence1:1801602..1802831(+)	frameshift		1802795	WP_003814091.1	ABC transporter permease	95.4	81.8	44.4
MGA_1482	LOCUS_14780	sequence1:1802833..1803897(+)	partial			WP_013390347.1	ATP-binding cassette domain-containing protein	94.1	71.1	30.1
MGA_1487	LOCUS_14830	sequence1:1809825..1812221(-)	partial			WP_013223744.1	alpha-galactosidase	37.1	42.6	30.7
MGA_1492	LOCUS_14880	sequence1:1820007..1820690(+)	partial			WP_013390354.1	hypothetical protein	84.6	66.3	38.5
MGA_1526	LOCUS_15220	sequence1:1861255..1861845(-)	partial			WP_013389731.1	MDR family MFS transporter	38.3	15.4	53.3
MGA_1528	LOCUS_15230	sequence1:1868120..1868656(+)	frameshift		1868650	WP_010921446.1	NAD(+) synthase	97.2	25.5	43.2
MGA_1529	LOCUS_15240	sequence1:1868691..1870025(+)	frameshift		1868653,1868662	WP_011107164.1	NAD(+) synthase	98.4	70.8	29.4
MGA_1539	LOCUS_15330	sequence1:1888091..1889983(-)	partial			WP_052846817.1	Sip1-related alpha-galactosidase	64.0	55.8	29.5
MGA_1548	LOCUS_15420	sequence1:1901670..1903229(-)	partial			WP_011068621.1	FIVAR domain-containing protein	75.1	62.0	27.5
MGA_1554	LOCUS_15480	sequence1:1911732..1912754(+)	partial			WP_007054642.1	potassium channel family protein	58.5	78.0	56.3
MGA_1562	LOCUS_15560	sequence1:1922993..1923997(+)	partial			WP_170114949.1	NUDIX hydrolase	85.9	70.3	59.4
