{ "tc_result": [ { "organism_name": "Nakamurella multipartita", "strain": "strain=DSM 44233", "accession": "GCA_000024365.1", "taxid": 53461, "species_taxid": 53461, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 2020, "total_fragments": 2020, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Nakamurella flava", "strain": "strain=N5BH11", "accession": "GCA_005298075.1", "taxid": 2576308, "species_taxid": 2576308, "relation_to_type": "type", "validated": true, "ani": 79.9385, "matched_fragments": 791, "total_fragments": 2020, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nakamurella flavida", "strain": "strain=KCTC 19127", "accession": "GCA_016918095.1", "taxid": 363630, "species_taxid": 363630, "relation_to_type": "type", "validated": true, "ani": 79.2473, "matched_fragments": 636, "total_fragments": 2020, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nakamurella leprariae", "strain": "strain=YIM 132084", "accession": "GCA_016918035.1", "taxid": 2803911, "species_taxid": 2803911, "relation_to_type": "type", "validated": true, "ani": 79.2356, "matched_fragments": 641, "total_fragments": 2020, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nakamurella endophytica", "strain": "strain=CGMCC 4.7308", "accession": "GCA_014646215.1", "taxid": 1748367, "species_taxid": 1748367, "relation_to_type": "type", "validated": true, "ani": 78.6138, "matched_fragments": 686, "total_fragments": 2020, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nakamurella deserti", "strain": "strain=12Sc4-1", "accession": "GCA_003260015.1", "taxid": 2164074, "species_taxid": 2164074, "relation_to_type": "type", "validated": true, "ani": 78.4273, "matched_fragments": 617, "total_fragments": 2020, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nakamurella lactea", "strain": "strain=DSM 19367", "accession": "GCA_000426645.1", "taxid": 459515, "species_taxid": 459515, "relation_to_type": "type", "validated": true, "ani": 77.8857, "matched_fragments": 597, "total_fragments": 2020, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nakamurella aerolata", "strain": "strain=DB0629", "accession": "GCA_013002705.1", "taxid": 1656892, "species_taxid": 1656892, "relation_to_type": "type", "validated": true, "ani": 77.829, "matched_fragments": 467, "total_fragments": 2020, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudonocardia antarctica", "strain": "strain=DSM 44749", "accession": "GCA_013408715.1", "taxid": 237656, "species_taxid": 237656, "relation_to_type": "type", "validated": true, "ani": 76.7241, "matched_fragments": 570, "total_fragments": 2020, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinoalloteichus cyanogriseus", "strain": "strain=DSM 43889", "accession": "GCA_000429185.2", "taxid": 65497, "species_taxid": 65497, "relation_to_type": "type", "validated": true, "ani": 76.3922, "matched_fragments": 372, "total_fragments": 2020, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 99.54, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_000024365.1", "gtdb_species": "s__Nakamurella multipartita", "ani": 100.0, "matched_fragments": 2018, "total_fragments": 2020, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Nakamurellaceae;g__Nakamurella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_005298075.1", "gtdb_species": "s__Nakamurella flava", "ani": 79.9101, "matched_fragments": 795, "total_fragments": 2020, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Nakamurellaceae;g__Nakamurella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016918095.1", "gtdb_species": "s__Nakamurella flavida", "ani": 79.2588, "matched_fragments": 636, "total_fragments": 2020, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Nakamurellaceae;g__Nakamurella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016918035.1", "gtdb_species": "s__Nakamurella sp016918035", "ani": 79.2196, "matched_fragments": 643, "total_fragments": 2020, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Nakamurellaceae;g__Nakamurella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_017882715.1", "gtdb_species": "s__Nakamurella sp017882715", "ani": 78.9115, "matched_fragments": 576, "total_fragments": 2020, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Nakamurellaceae;g__Nakamurella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009707545.1", "gtdb_species": "s__Nakamurella sp009707545", "ani": 78.7381, "matched_fragments": 708, "total_fragments": 2020, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Nakamurellaceae;g__Nakamurella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014646215.1", "gtdb_species": "s__Nakamurella endophytica", "ani": 78.6757, "matched_fragments": 676, "total_fragments": 2020, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Nakamurellaceae;g__Nakamurella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900104535.1", "gtdb_species": "s__Nakamurella panacisegetis", "ani": 78.5804, "matched_fragments": 580, "total_fragments": 2020, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Nakamurellaceae;g__Nakamurella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000426645.1", "gtdb_species": "s__Nakamurella lactea", "ani": 77.8626, "matched_fragments": 601, "total_fragments": 2020, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Nakamurellaceae;g__Nakamurella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002813375.1", "gtdb_species": "s__Pseudonocardia alni", "ani": 76.6764, "matched_fragments": 559, "total_fragments": 2020, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Pseudonocardiaceae;g__Pseudonocardia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.52", "min_intra_species_ani": "96.72", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.85", "num_clustered_genomes": 6, "status": "-" }, { "accession": "GCF_001420995.1", "gtdb_species": "s__Pseudonocardia sp001420995", "ani": 76.4237, "matched_fragments": 574, "total_fragments": 2020, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Pseudonocardiaceae;g__Pseudonocardia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.03", "min_intra_species_ani": "98.66", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.86", "num_clustered_genomes": 8, "status": "-" }, { "accession": "GCF_013410565.1", "gtdb_species": "s__Streptomonospora nanhaiensis", "ani": 76.0797, "matched_fragments": 487, "total_fragments": 2020, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptosporangiales;f__Streptosporangiaceae;g__Streptomonospora", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.69", "min_intra_species_ani": "99.69", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.95", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_017882655.1", "gtdb_species": "s__Fen-668 sp017882655", "ani": 75.725, "matched_fragments": 122, "total_fragments": 2020, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Propionibacteriaceae;g__Fen-668", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }