{ "type": "genome", "identifier": "GCF_000024385.1", "organism": "Thermomonospora curvata DSM 43183", "title": "Thermomonospora curvata DSM 43183", "description": "na", "data type": "Genome sequencing and assembly", "organization": "US DOE Joint Genome Institute (JGI-PGF)", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000024385.1", "bioproject": "PRJNA224116", "biosample": "SAMN02598435", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "471852", "species_taxid": "2020", "organism_name": "Thermomonospora curvata DSM 43183", "infraspecific_name": "strain=DSM 43183", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2009/11/16", "asm_name": "ASM2438v1", "asm_submitter": "US DOE Joint Genome Institute (JGI-PGF)", "gbrs_paired_asm": "GCA_000024385.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/024/385/GCF_000024385.1_ASM2438v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5639016", "genome_size_ungapped": "5639016", "gc_percent": "71.500000", "replicon_count": "1", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_000024385.1-RS_2024_05_01", "annotation_date": "2024-05-01", "total_gene_count": "4997", "protein_coding_gene_count": "4893", "non_coding_gene_count": "76", "pubmed_id": "21475583" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2009-11-16", "dateModified": "2009-11-16", "datePublished": "2009-11-16", "_annotation": { "sample_count": 1, "sample_organism": [ "Thermomonospora curvata DSM 43183" ], "sample_taxid": [ "471852" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [ "None" ], "sample_host_disease_id": [], "sample_host_location": [], "sample_host_location_id": [], "data_size": "1.506 MB", "sample_ph_range": { "min": 6.0, "max": 6.0 }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 4.17, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "5639016", "Number of Sequences": "1", "Longest Sequences (bp)": "5639016", "N50 (bp)": "5639016", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "71.6", "Number of CDSs": "5101", "Average Protein Length": "314.3", "Coding Ratio (%)": "85.3", "Number of rRNAs": "12", "Number of tRNAs": "78", "Number of CRISPRs": "14" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Thermomonospora curvata", "strain": "strain=DSM 43183", "accession": "GCA_000024385.1", "taxid": 2020, "species_taxid": 2020, 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