{ "tc_result": [ { "organism_name": "Stackebrandtia nassauensis", "strain": "strain=DSM 44728", "accession": "GCA_000024545.1", "taxid": 283811, "species_taxid": 283811, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 2280, "total_fragments": 2280, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Stackebrandtia albiflava", "strain": "strain=DSM 45044", "accession": "GCA_007994225.1", "taxid": 406432, "species_taxid": 406432, "relation_to_type": "type", "validated": true, "ani": 79.0967, "matched_fragments": 716, "total_fragments": 2280, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stackebrandtia endophytica", "strain": "strain=DSM 45928", "accession": "GCA_006716355.1", "taxid": 1496996, "species_taxid": 1496996, "relation_to_type": "type", "validated": true, "ani": 78.5825, "matched_fragments": 610, "total_fragments": 2280, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Glycomyces arizonensis", "strain": "strain=DSM 44726", "accession": "GCA_000482705.1", "taxid": 256035, "species_taxid": 256035, "relation_to_type": "type", "validated": true, "ani": 77.7019, "matched_fragments": 513, "total_fragments": 2280, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Glycomyces xiaoerkulensis", "strain": "strain=TRM 41368", "accession": "GCA_002798405.1", "taxid": 2038139, "species_taxid": 2038139, "relation_to_type": "type", "validated": true, "ani": 77.6503, "matched_fragments": 468, "total_fragments": 2280, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phytomonospora endophytica", "strain": "strain=YIM 65646", "accession": "GCA_014202425.1", "taxid": 714109, "species_taxid": 714109, "relation_to_type": "type", "validated": true, "ani": 77.5515, "matched_fragments": 740, "total_fragments": 2280, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Micromonospora veneta", "strain": "strain=CAP181", "accession": "GCA_016598485.1", "taxid": 2796464, "species_taxid": 2796464, "relation_to_type": "type", "validated": true, "ani": 77.1551, "matched_fragments": 513, "total_fragments": 2280, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Glycomyces paridis", "strain": "strain=CPCC 204357", "accession": "GCA_004912155.1", "taxid": 2126555, "species_taxid": 2126555, "relation_to_type": "type", "validated": true, "ani": 77.1279, "matched_fragments": 518, "total_fragments": 2280, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Micromonospora acroterricola", "strain": "strain=5R2A7", "accession": "GCA_003172955.1", "taxid": 2202421, "species_taxid": 2202421, "relation_to_type": "type", "validated": true, "ani": 77.1133, "matched_fragments": 481, "total_fragments": 2280, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Catellatospora chokoriensis", "strain": "strain=2-25(1)", "accession": "GCA_011297315.1", "taxid": 310353, "species_taxid": 310353, "relation_to_type": "type", "validated": true, "ani": 76.9821, "matched_fragments": 623, "total_fragments": 2280, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Catellatospora paridis", "strain": "strain=NEAU-CL2", "accession": "GCA_009720365.1", "taxid": 1617086, "species_taxid": 1617086, "relation_to_type": "type", "validated": true, "ani": 76.9137, "matched_fragments": 631, "total_fragments": 2280, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Catellatospora tritici", "strain": "strain=NEAU-YM18", "accession": "GCA_019083965.1", "taxid": 2851566, "species_taxid": 2851566, "relation_to_type": "type", "validated": true, "ani": 76.8665, "matched_fragments": 609, "total_fragments": 2280, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Micromonospora carbonacea", "strain": "strain=DSM 43815", "accession": "GCA_014205165.1", "taxid": 47853, "species_taxid": 47853, "relation_to_type": "type", "validated": true, "ani": 76.8095, "matched_fragments": 621, "total_fragments": 2280, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Catellatospora vulcania", "strain": "strain=NEAU-JM1", "accession": "GCA_009720385.1", "taxid": 1460450, "species_taxid": 1460450, "relation_to_type": "type", "validated": true, "ani": 76.8087, "matched_fragments": 639, "total_fragments": 2280, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Catellatospora methionotrophica", "strain": "strain=IMSNU 22006", "accession": "GCA_011297335.1", "taxid": 121620, "species_taxid": 121620, "relation_to_type": "type", "validated": true, "ani": 76.8084, "matched_fragments": 630, "total_fragments": 2280, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Micromonospora carbonacea", "strain": "strain=aurantiaca", "accession": "GCA_013389765.1", "taxid": 47853, "species_taxid": 47853, "relation_to_type": "type", "validated": true, "ani": 76.802, "matched_fragments": 617, "total_fragments": 2280, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Catellatospora methionotrophica", "strain": "strain=NBRC 14553", "accession": "GCA_016862655.1", "taxid": 121620, "species_taxid": 121620, "relation_to_type": "type", "validated": true, "ani": 76.7746, "matched_fragments": 631, "total_fragments": 2280, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Inhella inkyongensis", "strain": "strain=IMCC1713", "accession": "GCA_005952805.1", "taxid": 392593, "species_taxid": 392593, "relation_to_type": "type", "validated": true, "ani": 75.0514, "matched_fragments": 81, "total_fragments": 2280, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acidovorax anthurii", "strain": "strain=CFPB 3232", "accession": "GCA_003269065.1", "taxid": 78229, "species_taxid": 78229, "relation_to_type": "type", "validated": true, "ani": 74.9748, "matched_fragments": 129, "total_fragments": 2280, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Inhella inkyongensis", "strain": "strain=DSM 23958", "accession": "GCA_014202795.1", "taxid": 392593, "species_taxid": 392593, "relation_to_type": "type", "validated": true, "ani": 74.9608, "matched_fragments": 82, "total_fragments": 2280, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acidovorax citrulli", "strain": "strain=DSM 17060", "accession": "GCA_900100305.1", "taxid": 80869, "species_taxid": 80869, "relation_to_type": "type", "validated": true, "ani": 74.9241, "matched_fragments": 119, "total_fragments": 2280, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acidovorax avenae subsp. avenae", "strain": "strain=ATCC 19860", "accession": "GCA_000176855.2", "taxid": 80870, "species_taxid": 80867, "relation_to_type": "suspected-type", "validated": true, "ani": 74.8961, "matched_fragments": 133, "total_fragments": 2280, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 2.78, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_000024545.1", "gtdb_species": "s__Stackebrandtia nassauensis", "ani": 100.0, "matched_fragments": 2279, "total_fragments": 2280, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Stackebrandtia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_007994225.1", "gtdb_species": "s__Stackebrandtia albiflava", "ani": 79.0637, "matched_fragments": 722, "total_fragments": 2280, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Stackebrandtia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_006716355.1", "gtdb_species": "s__Stackebrandtia endophytica", "ani": 78.5452, "matched_fragments": 610, "total_fragments": 2280, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Stackebrandtia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016428645.1", "gtdb_species": "s__Glycomyces sp016428645", "ani": 77.8827, "matched_fragments": 503, "total_fragments": 2280, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Glycomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000482705.1", "gtdb_species": "s__Glycomyces arizonensis", "ani": 77.7386, "matched_fragments": 508, "total_fragments": 2280, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Glycomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002798405.1", "gtdb_species": "s__Glycomyces xiaoerkulensis", "ani": 77.6535, "matched_fragments": 464, "total_fragments": 2280, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Glycomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014202425.1", "gtdb_species": "s__Phytomonospora endophytica", "ani": 77.5076, "matched_fragments": 750, "total_fragments": 2280, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Phytomonospora", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_019112895.1", "gtdb_species": "s__Stackebrandtia faecavium", "ani": 77.3606, "matched_fragments": 266, "total_fragments": 2280, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Stackebrandtia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_019113825.1", "gtdb_species": "s__Stackebrandtia excrementipullorum", "ani": 77.3342, "matched_fragments": 352, "total_fragments": 2280, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Stackebrandtia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003172955.1", "gtdb_species": "s__Micromonospora sp003172955", "ani": 77.1575, "matched_fragments": 475, "total_fragments": 2280, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Micromonospora", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900107255.1", "gtdb_species": "s__Micromonospora_E pattaloongensis", "ani": 77.1122, "matched_fragments": 451, "total_fragments": 2280, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Micromonospora_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004217615.1", "gtdb_species": "s__Micromonospora kangleipakensis", "ani": 77.0564, "matched_fragments": 553, "total_fragments": 2280, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Micromonospora", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003583405.1", "gtdb_species": "s__Micromonospora radicis", "ani": 76.903, "matched_fragments": 491, "total_fragments": 2280, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Micromonospora", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016862575.1", "gtdb_species": "s__Catellatospora bangladeshensis", "ani": 76.8887, "matched_fragments": 642, "total_fragments": 2280, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Catellatospora", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "95.24", "min_intra_species_ani": "95.24", "mean_intra_species_af": "0.85", "min_intra_species_af": "0.85", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_019083965.1", "gtdb_species": "s__Catellatospora sp019083965", "ani": 76.8509, "matched_fragments": 616, "total_fragments": 2280, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Catellatospora", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_018327705.1", "gtdb_species": "s__Catellatospora sp018327705", "ani": 76.818, "matched_fragments": 664, "total_fragments": 2280, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Catellatospora", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014205165.1", "gtdb_species": "s__Micromonospora carbonacea", "ani": 76.8157, "matched_fragments": 619, "total_fragments": 2280, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Micromonospora", "ani_circumscription_radius": 95.5545, "mean_intra_species_ani": "99.19", "min_intra_species_ani": "98.38", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.91", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_011297335.1", "gtdb_species": "s__Catellatospora methionotrophica", "ani": 76.8033, "matched_fragments": 630, "total_fragments": 2280, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Catellatospora", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_016428875.1", "gtdb_species": "s__Xylophilus sp016428875", "ani": 74.9573, "matched_fragments": 139, "total_fragments": 2280, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Xylophilus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000176855.2", "gtdb_species": "s__Acidovorax_A avenae", "ani": 74.9238, "matched_fragments": 134, "total_fragments": 2280, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Acidovorax_A", "ani_circumscription_radius": 95.2137, "mean_intra_species_ani": "96.92", "min_intra_species_ani": "95.92", "mean_intra_species_af": "0.74", "min_intra_species_af": "0.51", "num_clustered_genomes": 18, "status": "-" }, { "accession": "GCA_019232985.1", "gtdb_species": "s__JAFAMW01 sp019232985", "ani": 74.9044, "matched_fragments": 126, "total_fragments": 2280, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__JAFAMW01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002397315.1", "gtdb_species": "s__Acidovorax_A sp002397315", "ani": 74.78, "matched_fragments": 108, "total_fragments": 2280, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Acidovorax_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }