<?xml version="1.0" ?>
<BioSampleSet><BioSample submission_date="2011-08-23T16:26:43.056" last_update="2023-12-24T02:00:07.491" publication_date="2009-02-19T00:00:00.000" access="public" id="1910" accession="SAMN00001910">   <Ids>     <Id db="BioSample" is_primary="1">SAMN00001910</Id>     <Id db="DOE Joint Genome Institute" db_label="Sample name">FUGO</Id>     <Id db="SRA">SRS002077</Id>   </Ids>   <Description>     <Title>Brachyspira murdochii DSM 12563, complete genome.</Title>     <Organism taxonomy_id="526224" taxonomy_name="Brachyspira murdochii DSM 12563"/>     <Comment>       <Paragraph>Keywords: GSC:MIGS:2.1</Paragraph>     </Comment>   </Description>   <Owner>     <Name abbreviation="JGI">Joint Genome Institute, U.S. Department of Energy</Name>   </Owner>   <Models>     <Model>Generic</Model>   </Models>   <Package display_name="Generic">Generic.1.0</Package>   <Attributes>     <Attribute attribute_name="biotic_relationship" harmonized_name="biotic_relationship" display_name="observed biotic relationship">free living</Attribute>     <Attribute attribute_name="Isolation Site">intestinal contents of healthy swine</Attribute>     <Attribute attribute_name="Temperature Optimum">39C</Attribute>     <Attribute attribute_name="isol_growth_condt" harmonized_name="isol_growth_condt" display_name="isolation and growth condition">Missing</Attribute>     <Attribute attribute_name="Body Sample Site">Gastrointestinal tract</Attribute>     <Attribute attribute_name="Motility">Motile</Attribute>     <Attribute attribute_name="GOLD Stamp ID">Gc01276</Attribute>     <Attribute attribute_name="lat_lon" harmonized_name="lat_lon" display_name="latitude and longitude">52.939 N 73.549 W</Attribute>     <Attribute attribute_name="Diseases" harmonized_name="disease" display_name="disease">None</Attribute>     <Attribute attribute_name="collection_date" harmonized_name="collection_date" display_name="collection date">1992</Attribute>     <Attribute attribute_name="investigation_type" harmonized_name="investigation_type" display_name="investigation type">bacteria_archaea</Attribute>     <Attribute attribute_name="environment">Host, Intestinal microflora</Attribute>     <Attribute attribute_name="Gram Staining">gram-</Attribute>     <Attribute attribute_name="Gene Calling Method">Prodigal, GenePRIMP</Attribute>     <Attribute attribute_name="Temperature Range">Mesophile</Attribute>     <Attribute attribute_name="Type Strain" harmonized_name="type_strain" display_name="submitter-asserted type strain">Yes</Attribute>     <Attribute attribute_name="rel_to_oxygen" harmonized_name="rel_to_oxygen" display_name="relationship to oxygen">anaerobe</Attribute>     <Attribute attribute_name="Body Sample Subsite">Intestinal tract</Attribute>     <Attribute attribute_name="project_name" harmonized_name="project_name" display_name="project name">Brachyspira murdochii 56-150, DSM 12563</Attribute>     <Attribute attribute_name="Number of Reads">79829 Sanger, 861386 pyrosequencing</Attribute>     <Attribute attribute_name="ref_biomaterial" harmonized_name="ref_biomaterial" display_name="reference for biomaterial">DSM 12563, ATCC 51284, CIP 105832</Attribute>     <Attribute attribute_name="alt_elev">Missing</Attribute>     <Attribute attribute_name="num_replicons" harmonized_name="num_replicons" display_name="number of replicons">1</Attribute>     <Attribute attribute_name="isolation-source" harmonized_name="isolation_source" display_name="isolation source">intestinal contents of healthy swine</Attribute>     <Attribute attribute_name="Funding Program">DOE-GEBA 2007</Attribute>     <Attribute attribute_name="Sporulation">Nonsporulating</Attribute>     <Attribute attribute_name="trophic_level" harmonized_name="trophic_level" display_name="trophic level">chemoorganotroph</Attribute>     <Attribute attribute_name="sequencing depth">19.7x Sanger, 48.9x pyrosequence</Attribute>     <Attribute attribute_name="country" harmonized_name="geo_loc_name" display_name="geographic location">Canada</Attribute>     <Attribute attribute_name="Greengenes ID">88867</Attribute>     <Attribute attribute_name="strain" harmonized_name="strain" display_name="strain">DSM 12563</Attribute>     <Attribute attribute_name="depth" harmonized_name="depth" display_name="depth">Missing</Attribute>     <Attribute attribute_name="Cell Shape">Spiral-shaped</Attribute>     <Attribute attribute_name="Host Health">Healthy</Attribute>     <Attribute attribute_name="Host Name" harmonized_name="host" display_name="host">Swine</Attribute>     <Attribute attribute_name="type-material">type strain of Serpulina murdochii</Attribute>   </Attributes>   <Links/>   <Status status="live" when="2013-09-19T09:17:09"/> </BioSample> </BioSampleSet>
