{
    "type": "genome",
    "identifier": "GCF_000146285.1",
    "organism": "Mobiluncus curtisii subsp. curtisii ATCC 35241",
    "title": "Mobiluncus curtisii subsp. curtisii ATCC 35241",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Baylor College of Medicine",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_000146285.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN00117214",
        "wgs_master": "AEEE00000000.1",
        "refseq_category": "na",
        "taxid": "585198",
        "species_taxid": "2051",
        "organism_name": "Mobiluncus curtisii subsp. curtisii ATCC 35241",
        "infraspecific_name": "strain=ATCC 35241",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2010/08/27",
        "asm_name": "ASM14628v1",
        "asm_submitter": "Baylor College of Medicine",
        "gbrs_paired_asm": "GCA_000146285.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/146/285/GCF_000146285.1_ASM14628v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "2152970",
        "genome_size_ungapped": "2136873",
        "gc_percent": "55.500000",
        "replicon_count": "1",
        "scaffold_count": "8",
        "contig_count": "21",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_000146285.1-RS_2024_05_15",
        "annotation_date": "2024-05-15",
        "total_gene_count": "1871",
        "protein_coding_gene_count": "1798",
        "non_coding_gene_count": "52",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2010-08-27",
    "dateModified": "2010-08-27",
    "datePublished": "2010-08-27",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Mobiluncus curtisii subsp. curtisii ATCC 35241"
        ],
        "sample_taxid": [
            "585198"
        ],
        "sample_host_organism": [
            "Homo sapiens"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "not determined"
        ],
        "sample_host_location_id": [],
        "data_size": "0.610 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "2152970",
        "Number of Sequences": "8",
        "Longest Sequences (bp)": "2137068",
        "N50 (bp)": "2137068",
        "Gap Ratio (%)": "0.747665",
        "GCcontent (%)": "55.7",
        "Number of CDSs": "1826",
        "Average Protein Length": "349.8",
        "Coding Ratio (%)": "89.0",
        "Number of rRNAs": "3",
        "Number of tRNAs": "47",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Mobiluncus curtisii subsp. curtisii",
                "strain": "strain=ATCC 35241",
                "accession": "GCA_000146285.1",
                "taxid": 144177,
                "species_taxid": 2051,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 99.9998,
                "matched_fragments": 713,
                "total_fragments": 713,
                "ani_threshold": 95,
                "status": "inconclusive"
            },
            {
                "organism_name": "Mobiluncus curtisii",
                "strain": "strain=FDAARGOS_1127",
                "accession": "GCA_016725225.1",
                "taxid": 2051,
                "species_taxid": 2051,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 99.9647,
                "matched_fragments": 709,
                "total_fragments": 713,
                "ani_threshold": 95,
                "status": "inconclusive"
            },
            {
                "organism_name": "Mobiluncus curtisii subsp. curtisii",
                "strain": "strain=NCTC11656",
                "accession": "GCA_900453315.1",
                "taxid": 144177,
                "species_taxid": 2051,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 99.9629,
                "matched_fragments": 709,
                "total_fragments": 713,
                "ani_threshold": 95,
                "status": "inconclusive"
            },
            {
                "organism_name": "Mobiluncus holmesii",
                "strain": "strain=NCTC11657",
                "accession": "GCA_900453235.1",
                "taxid": 144178,
                "species_taxid": 144178,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 98.1631,
                "matched_fragments": 664,
                "total_fragments": 713,
                "ani_threshold": 95,
                "status": "inconclusive"
            },
            {
                "organism_name": "Mobiluncus holmesii",
                "strain": "strain=ATCC 35242",
                "accession": "GCA_000185445.1",
                "taxid": 144178,
                "species_taxid": 144178,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 98.1364,
                "matched_fragments": 670,
                "total_fragments": 713,
                "ani_threshold": 95,
                "status": "inconclusive"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_000146285.1",
                "gtdb_species": "s__Mobiluncus curtisii",
                "ani": 99.9998,
                "matched_fragments": 713,
                "total_fragments": 713,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Actinomycetaceae;g__Mobiluncus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.67",
                "min_intra_species_ani": "96.00",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.91",
                "num_clustered_genomes": 18,
                "status": "conclusive"
            },
            {
                "accession": "GCF_000160615.1",
                "gtdb_species": "s__Mobiluncus mulieris",
                "ani": 83.2026,
                "matched_fragments": 115,
                "total_fragments": 713,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Actinomycetaceae;g__Mobiluncus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.64",
                "min_intra_species_ani": "97.66",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 20,
                "status": "-"
            },
            {
                "accession": "GCF_009695935.1",
                "gtdb_species": "s__Mobiluncus porci",
                "ani": 77.4201,
                "matched_fragments": 114,
                "total_fragments": 713,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Actinomycetaceae;g__Mobiluncus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.398,
        "cell_length": 0.301,
        "doubling_h": null,
        "growth_tmp": 37.0,
        "optimum_tmp": 37.0,
        "optimum_ph": null,
        "genome_size": 2135714.0,
        "gc_content": 55.553,
        "coding_genes": 1844.0,
        "rRNA16S_genes": 2.0,
        "tRNA_genes": 46.0,
        "gram_stain": 1.0,
        "sporulation": 0.0,
        "motility": 1.0,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_genome_taxon": [
        "Mobiluncus",
        "curtisii",
        "subsp.",
        "curtisii",
        "ATCC",
        "35241"
    ],
    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}