{ "type": "genome", "identifier": "GCF_000155455.1", "organism": "Helicobacter canadensis MIT 98-5491", "title": "Helicobacter canadensis MIT 98-5491", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Broad Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000155455.1", "bioproject": "PRJNA224116", "biosample": "SAMN02463679", "wgs_master": "ABQS00000000.1", "refseq_category": "na", "taxid": "537970", "species_taxid": "123841", "organism_name": "Helicobacter canadensis MIT 98-5491", "infraspecific_name": "strain=MIT 98-5491", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2008/08/28", "asm_name": "ASM15545v1", "asm_submitter": "Broad Institute", "gbrs_paired_asm": "GCA_000155455.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/155/455/GCF_000155455.1_ASM15545v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "1633489", "genome_size_ungapped": "1605969", "gc_percent": "33.500000", "replicon_count": "0", "scaffold_count": "23", "contig_count": "126", "annotation_provider": "NCBI RefSeq", "annotation_name": "NCBI Prokaryotic Genome Annotation Pipeline (PGAP)", "annotation_date": "2024-02-09", "total_gene_count": "1690", "protein_coding_gene_count": "1582", "non_coding_gene_count": "43", "pubmed_id": "25212613" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2008-08-28", "dateModified": "2008-08-28", "datePublished": "2008-08-28", "_annotation": { "sample_count": 1, "sample_organism": [ "Helicobacter canadensis MIT 98-5491" ], "sample_taxid": [ "537970" ], "sample_host_organism": [ "Homo sapiens" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "not determined" ], "sample_host_location_id": [], "data_size": "0.442 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 91.67, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "1633489", "Number of Sequences": "23", "Longest Sequences (bp)": "889772", "N50 (bp)": "889772", "Gap Ratio (%)": "1.684737", "GCcontent (%)": "33.7", "Number of CDSs": "1546", "Average Protein Length": "311.2", "Coding Ratio (%)": "88.4", "Number of rRNAs": "2", "Number of tRNAs": "37", "Number of CRISPRs": "2" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Helicobacter canadensis", "strain": "strain=MIT 98-5491", "accession": "GCA_000155455.1", "taxid": 123841, "species_taxid": 123841, "relation_to_type": "type", 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