{
    "type": "genome",
    "identifier": "GCF_000156015.1",
    "organism": "Eshraghiella crossota DSM 2876",
    "title": "Eshraghiella crossota DSM 2876",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Washington University Genome Sequencing Center",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_000156015.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN00008799",
        "wgs_master": "ABWN00000000.1",
        "refseq_category": "na",
        "taxid": "511680",
        "species_taxid": "45851",
        "organism_name": "Eshraghiella crossota DSM 2876",
        "infraspecific_name": "strain=DSM 2876",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2009/04/09",
        "asm_name": "ASM15601v1",
        "asm_submitter": "Washington University Genome Sequencing Center",
        "gbrs_paired_asm": "GCA_000156015.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/156/015/GCF_000156015.1_ASM15601v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "2496039",
        "genome_size_ungapped": "2482791",
        "gc_percent": "37.500000",
        "replicon_count": "0",
        "scaffold_count": "31",
        "contig_count": "51",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_000156015.1-RS_2024_09_22",
        "annotation_date": "2024-09-22",
        "total_gene_count": "2500",
        "protein_coding_gene_count": "2391",
        "non_coding_gene_count": "58",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2009-04-09",
    "dateModified": "2009-04-09",
    "datePublished": "2009-04-09",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Eshraghiella crossota DSM 2876"
        ],
        "sample_taxid": [
            "511680"
        ],
        "sample_host_organism": [
            "Homo sapiens"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "not determined"
        ],
        "sample_host_location_id": [],
        "data_size": "0.694 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "2496039",
        "Number of Sequences": "31",
        "Longest Sequences (bp)": "1117448",
        "N50 (bp)": "399583",
        "Gap Ratio (%)": "0.530761",
        "GCcontent (%)": "37.7",
        "Number of CDSs": "2414",
        "Average Protein Length": "311.5",
        "Coding Ratio (%)": "90.4",
        "Number of rRNAs": "4",
        "Number of tRNAs": "43",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Butyrivibrio crossotus",
                "strain": "strain=DSM 2876",
                "accession": "GCA_000156015.1",
                "taxid": 45851,
                "species_taxid": 45851,
                "relation_to_type": "type",
                "validated": true,
                "ani": 99.9999,
                "matched_fragments": 818,
                "total_fragments": 820,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Butyrivibrio crossotus",
                "strain": "strain=DSM 2876",
                "accession": "GCA_025148445.1",
                "taxid": 45851,
                "species_taxid": 45851,
                "relation_to_type": "type",
                "validated": true,
                "ani": 99.9782,
                "matched_fragments": 817,
                "total_fragments": 820,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Roseburia inulinivorans",
                "strain": "strain=DSM 16841",
                "accession": "GCA_000174195.1",
                "taxid": 360807,
                "species_taxid": 360807,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 84.0703,
                "matched_fragments": 88,
                "total_fragments": 820,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Jutongia hominis",
                "strain": "strain=BX3",
                "accession": "GCA_014384965.1",
                "taxid": 2763664,
                "species_taxid": 2763664,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.6819,
                "matched_fragments": 68,
                "total_fragments": 820,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
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        "gtdb_result": [
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                "accession": "GCF_000156015.1",
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                "total_fragments": 820,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Butyrivibrio_A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.48",
                "min_intra_species_ani": "97.83",
                "mean_intra_species_af": "0.85",
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                "num_clustered_genomes": 12,
                "status": "conclusive"
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            {
                "accession": "GCF_014287955.1",
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                "status": "-"
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            {
                "accession": "GCF_009680455.1",
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                "total_fragments": 820,
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                "mean_intra_species_ani": "97.83",
                "min_intra_species_ani": "97.23",
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                "num_clustered_genomes": 35,
                "status": "-"
            },
            {
                "accession": "GCA_000431815.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Butyrivibrio_A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.85",
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                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCF_018918265.1",
                "gtdb_species": "s__Falcatimonas sp018918265",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Falcatimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.30",
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                "mean_intra_species_af": "0.93",
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            {
                "accession": "GCF_003464165.1",
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            {
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            {
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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            {
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                "accession": "GCA_900766925.1",
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            },
            {
                "accession": "GCA_900551945.1",
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        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
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        "genome_size": null,
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        "rRNA16S_genes": null,
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        "gram_stain": null,
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        "facultative_respiration": null,
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        "mesophilic_range_tmp": null,
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        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
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        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
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    },
    "_genome_taxon": [
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        "crossota",
        "DSM",
        "2876"
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    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}