{ "type": "genome", "identifier": "GCF_000158835.2", "organism": "Fusobacterium gonidiaformans ATCC 25563", "title": "Fusobacterium gonidiaformans ATCC 25563", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Broad Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000158835.2", "bioproject": "PRJNA224116", "biosample": "SAMN02463686", "wgs_master": "ACET00000000.2", "refseq_category": "na", "taxid": "469615", "species_taxid": "849", "organism_name": "Fusobacterium gonidiaformans ATCC 25563", "infraspecific_name": "strain=ATCC 25563", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2015/07/15", "asm_name": "Fuso_gon_ATCC25563_V2", "asm_submitter": "Broad Institute", "gbrs_paired_asm": "GCA_000158835.2", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/158/835/GCF_000158835.2_Fuso_gon_ATCC25563_V2", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "1698329", "genome_size_ungapped": "1696529", "gc_percent": "32.500000", "replicon_count": "0", "scaffold_count": "6", "contig_count": "24", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_000158835.2-RS_2024_08_08", "annotation_date": "2024-08-08", "total_gene_count": "1722", "protein_coding_gene_count": "1620", "non_coding_gene_count": "64", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2015-07-15", "dateModified": "2015-07-15", "datePublished": "2015-07-15", "_annotation": { "sample_count": 1, "sample_organism": [ "Fusobacterium gonidiaformans ATCC 25563" ], "sample_taxid": [ "469615" ], "sample_host_organism": [ "Homo sapiens" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "not determined" ], "sample_host_location_id": [], "data_size": "0.464 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "1698329", "Number of Sequences": "6", "Longest Sequences (bp)": "794231", "N50 (bp)": "376922", "Gap Ratio (%)": "0.105987", "GCcontent (%)": "32.4", "Number of CDSs": "1662", "Average Protein Length": "315.2", "Coding Ratio (%)": "92.5", "Number of rRNAs": "0", "Number of tRNAs": "46", "Number of CRISPRs": "1" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Fusobacterium gonidiaformans", "strain": "strain=ATCC 25563", "accession": 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