<?xml version="1.0" ?>
<BioSampleSet><BioSample submission_date="2009-06-17T13:53:51.613" last_update="2019-06-20T16:11:31.431" publication_date="2009-01-05T00:00:00.000" access="public" id="2545" accession="SAMN00002545">   <Ids>     <Id db="BioSample" is_primary="1">SAMN00002545</Id>     <Id db="BCM" db_label="Sample name">BCM-HMP0079</Id>     <Id db="SRA">SRS001908</Id>   </Ids>   <Description>     <Title>MIGS Cultured Bacterial/Archaeal sample from Actinomyces urogenitalis DSM 15434</Title>     <Organism taxonomy_id="525246" taxonomy_name="Actinomyces urogenitalis DSM 15434"/>     <Comment>       <Paragraph>Actinomyces urogenitalis DSM 15434</Paragraph>       <Paragraph>Keywords: GSC:MIxS;MIGS:6.0</Paragraph>     </Comment>   </Description>   <Owner>     <Name abbreviation="BCM">Baylor College of Medicine</Name>   </Owner>   <Models>     <Model>MIGS.ba</Model>   </Models>   <Package display_name="MIGS: cultured bacteria/archaea; version 6.0">MIGS.ba.6.0</Package>   <Attributes>     <Attribute attribute_name="finishing strategy (depth of coverage)">Level 2: High-Quality Draft35.81x;1230</Attribute>     <Attribute attribute_name="collection date" harmonized_name="collection_date" display_name="collection date">not determined</Attribute>     <Attribute attribute_name="estimated_size" harmonized_name="estimated_size" display_name="estimated size">2614000</Attribute>     <Attribute attribute_name="isol_growth_condt" harmonized_name="isol_growth_condt" display_name="isolation and growth condition">not determined</Attribute>     <Attribute attribute_name="specific host" harmonized_name="host" display_name="host">Homo sapiens</Attribute>     <Attribute attribute_name="project_type">Reference Genome</Attribute>     <Attribute attribute_name="lat lon" harmonized_name="lat_lon" display_name="latitude and longitude">not determined</Attribute>     <Attribute attribute_name="biome" harmonized_name="env_broad_scale" display_name="broad-scale environmental context">terrestrial biome [ENVO:00000446]</Attribute>     <Attribute attribute_name="misc_param: HMP body site">Vaginal</Attribute>     <Attribute attribute_name="nucleic acid extraction">not determined</Attribute>     <Attribute attribute_name="feature" harmonized_name="env_local_scale" display_name="local-scale environmental context">Homo sapiens-associated habitat [ENVO:00009003]</Attribute>     <Attribute attribute_name="investigation_type" harmonized_name="investigation_type" display_name="investigation type">missing</Attribute>     <Attribute attribute_name="host taxid" harmonized_name="host_taxid" display_name="host taxonomy ID">9606</Attribute>     <Attribute attribute_name="project_name" harmonized_name="project_name" display_name="project name">Actinomyces urogenitalis DSM 15434</Attribute>     <Attribute attribute_name="assembly">Newbler v. 1.1.03.24</Attribute>     <Attribute attribute_name="geo_loc_name" harmonized_name="geo_loc_name" display_name="geographic location">not determined</Attribute>     <Attribute attribute_name="source_mat_id" harmonized_name="source_material_id" display_name="source material identifiers">DSM 15434</Attribute>     <Attribute attribute_name="material" harmonized_name="env_medium" display_name="environmental medium">biological product [ENVO:02000043]</Attribute>     <Attribute attribute_name="ref_biomaterial" harmonized_name="ref_biomaterial" display_name="reference for biomaterial">not determined</Attribute>     <Attribute attribute_name="misc_param: HMP supersite">urogenital_tract</Attribute>     <Attribute attribute_name="num_replicons" harmonized_name="num_replicons" display_name="number of replicons">not determined</Attribute>     <Attribute attribute_name="sop">http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf</Attribute>     <Attribute attribute_name="env_package" harmonized_name="env_package" display_name="environmental package">missing</Attribute>     <Attribute attribute_name="strain" harmonized_name="strain" display_name="strain">DSM 15434</Attribute>     <Attribute attribute_name="sequencing method">454-GS-FLX, Illumina</Attribute>     <Attribute attribute_name="culture-collection" harmonized_name="culture_collection" display_name="culture collection">DSM:15434</Attribute>     <Attribute attribute_name="isolation-source" harmonized_name="isolation_source" display_name="isolation source">missing</Attribute>     <Attribute attribute_name="type-material">type strain of Actinomyces urogenitalis</Attribute>   </Attributes>   <Links>     <Link type="url" label="Homo sapiens Microbiome Project at Baylor College of Medicine">https://www.hgsc.bcm.edu/human-microbiome</Link>     <Link type="url" label="DSM 15434">http://www.dsmz.de/microorganisms/html/strains/strain.dsm015434.html</Link>     <Link type="entrez" target="bioproject">31429</Link>   </Links>   <Status status="live" when="2014-04-01T11:26:13"/> </BioSample> </BioSampleSet>
