# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_28	LOCUS_00020	sequence28:1..543(+)	internal_stop_codon	541..543(+)		WP_003596308.1	IS30 family transposase	100.0	52.1	46.1
MGA_47	LOCUS_00090	sequence39:149..1387(+)	internal_stop_codon	1385..1387(+)		WP_011254026.1	IS1182 family transposase	99.8	72.4	91.0
MGA_53	LOCUS_00140	sequence40:4954..6465(+)	partial			WP_018307275.1	ABC transporter permease	90.7	59.5	21.2
MGA_54	LOCUS_00150	sequence40:6821..7204(+)	partial			WP_011837229.1	FtsX-like permease family protein	93.7	13.1	28.0
MGA_59	LOCUS_00200	sequence40:8783..9160(-)	frameshift		8793,8797	WP_156093518.1	IS3 family transposase	99.2	47.9	34.7
MGA_66	LOCUS_00270	sequence40:13713..15014(-)	partial			WP_057811338.1	hypothetical protein	61.2	75.9	59.3
MGA_72	LOCUS_00330	sequence40:19120..19332(-)	internal_stop_codon	19336..19338(-),19120..19122(-),19339..19341(-)		WP_011222043.1	hypothetical protein	94.3	58.0	51.5
MGA_79	LOCUS_00400	sequence40:23773..24072(-)	partial			WP_011241729.1	replication initiator protein A	65.7	17.2	64.6
MGA_86	LOCUS_00450	sequence41:4098..4463(-)	partial			WP_002387267.1	helix-turn-helix transcriptional regulator	51.2	54.9	41.9
MGA_90	LOCUS_00490	sequence41:6247..6813(+)	frameshift		6789	WP_014565478.1	SLAP domain-containing protein	97.3	48.3	66.1
MGA_91	LOCUS_00500	sequence41:6915..7385(+)	frameshift		6789	WP_014565478.1	SLAP domain-containing protein	86.5	36.6	51.4
MGA_109	LOCUS_00660	sequence42:13519..13779(-)	frameshift		13536,13771	WP_003550121.1	(deoxy)nucleoside triphosphate pyrophosphohydrolase	91.9	56.4	93.7
MGA_127	LOCUS_00770	sequence44:14735..15439(-)	partial			WP_001106642.1	ATP-binding protein	98.7	57.5	52.4
MGA_133	LOCUS_00820	sequence44:21653..22093(+)	partial			WP_003548787.1	hypothetical protein	34.9	34.9	63.5
MGA_135	LOCUS_00840	sequence44:22775..23443(+)	partial			WP_011015670.1	ATP/GTP-binding protein	56.8	26.0	35.7
MGA_143	LOCUS_00920	sequence44:33540..33881(-)	partial			WP_010956682.1	IS30-like element ISTde2 family transposase	90.3	30.2	43.5
MGA_146	LOCUS_00950	sequence44:35248..35625(+)	frameshift		35225	WP_011674077.1	ISLre2-like element ISLca4 family transposase	51.2	14.0	42.6
MGA_203	LOCUS_01510	sequence44:93583..93879(-)	internal_stop_codon	93973..93975(-)		WP_003548666.1	glycosyl hydrolase family 8	100.0	26.2	67.3
MGA_204	LOCUS_01520	sequence44:93973..94563(-)	internal_stop_codon	93973..93975(-)		WP_003548666.1	glycosyl hydrolase family 8	98.0	51.3	70.3
MGA_206	LOCUS_01540	sequence44:96161..96631(-)	internal_stop_codon	96665..96667(-)		WP_011254037.1	hypothetical protein	100.0	54.5	65.4
MGA_207	LOCUS_01550	sequence44:96665..97021(-)	internal_stop_codon	96665..96667(-)		WP_011254037.1	hypothetical protein	100.0	41.3	71.2
MGA_209	LOCUS_01570	sequence44:97340..98527(-)	internal_stop_codon	98540..98542(-)		WP_003548622.1	glycerophosphodiester phosphodiesterase	97.0	65.0	54.7
MGA_210	LOCUS_01580	sequence44:98540..99130(-)	internal_stop_codon	98540..98542(-)		WP_003548622.1	glycerophosphodiester phosphodiesterase	99.0	32.5	50.0
MGA_219	LOCUS_01670	sequence44:106538..106945(-)	partial			WP_005693372.1	ATP-binding protein	94.1	31.5	48.0
MGA_220	LOCUS_01680	sequence44:107159..107530(-)	frameshift		107565	WP_003546245.1	SLAP domain-containing protein	97.6	24.2	47.1
MGA_223	LOCUS_01710	sequence44:109467..110648(-)	frameshift		110724,110694	WP_003548597.1	CPBP family intramembrane metalloprotease	99.7	80.8	73.7
MGA_224	LOCUS_01720	sequence44:110701..110913(-)	frameshift		110724,110694	WP_003548597.1	CPBP family intramembrane metalloprotease	95.7	13.8	77.6
MGA_225	LOCUS_01730	sequence44:110989..111204(-)	frameshift		111200	WP_003548592.1	helix-turn-helix transcriptional regulator	100.0	26.2	62.0
MGA_226	LOCUS_01740	sequence44:111177..111791(-)	frameshift		111200	WP_003548592.1	helix-turn-helix transcriptional regulator	96.6	72.7	71.6
MGA_234	LOCUS_01820	sequence44:120477..120698(+)	partial			WP_003562902.1	hypothetical protein	80.8	72.5	52.5
MGA_245	LOCUS_01930	sequence44:129600..130391(+)	internal_stop_codon	129558..129560(+)		WP_003643099.1	LysR family transcriptional regulator	96.6	80.6	39.0
MGA_250	LOCUS_01980	sequence45:1534..2502(-)	frameshift		2618	WP_003549893.1	IS110 family transposase	100.0	78.9	90.1
MGA_251	LOCUS_01990	sequence45:2604..2759(-)	frameshift		2618	WP_003549893.1	IS110 family transposase	90.2	11.3	97.8
MGA_254	LOCUS_02020	sequence45:3334..3603(+)	frameshift,internal_stop_codon	3328..3330(+)	3561	WP_191620026.1	transposase	92.1	31.8	73.2
MGA_255	LOCUS_02030	sequence45:3596..4336(+)	frameshift,internal_stop_codon	3328..3330(+)	3558	WP_068990772.1	IS66-like element short variant transposase	91.5	49.6	64.9
MGA_257	LOCUS_02040	sequence45:12324..16679(+)	partial			WP_041814900.1	Rib/alpha-like domain-containing protein	44.7	41.1	26.8
MGA_273	LOCUS_02200	sequence45:35975..36202(+)	partial			WP_011254551.1	UTP--glucose-1-phosphate uridylyltransferase GalU	98.7	25.2	81.1
MGA_314	LOCUS_02610	sequence45:77160..77453(+)	frameshift		77124	WP_080542561.1	SLAP domain-containing protein	69.1	36.2	56.7
MGA_321	LOCUS_02670	sequence45:84926..85315(+)	frameshift		85297	WP_011254281.1	PTS sugar transporter subunit IIC	100.0	27.2	81.4
MGA_322	LOCUS_02680	sequence45:85261..86361(+)	frameshift		85297	WP_011254281.1	PTS sugar transporter subunit IIC	95.9	73.9	77.5
MGA_342	LOCUS_02870	sequence45:106704..107549(+)	frameshift		107543	WP_003715873.1	zinc-binding alcohol dehydrogenase family protein	99.3	82.1	77.1
MGA_343	LOCUS_02880	sequence45:107546..107722(+)	frameshift		107543	WP_003715873.1	zinc-binding alcohol dehydrogenase family protein	100.0	17.1	77.6
MGA_387	LOCUS_03320	sequence45:152253..152729(+)	frameshift		152726	WP_003548174.1	TetR/AcrR family transcriptional regulator C-terminal domain-containing protein	100.0	75.6	50.6
MGA_494	LOCUS_04390	sequence45:244443..244991(-)	partial			WP_003358306.1	TetR/AcrR family transcriptional regulator	38.5	36.5	35.7
MGA_497	LOCUS_04420	sequence45:246440..246895(-)	partial			WP_003549137.1	formyl-CoA transferase	100.0	33.9	90.1
MGA_512	LOCUS_04560	sequence45:265239..265709(+)	partial			WP_010943415.1	OsmC family protein	75.0	63.4	31.4
MGA_518	LOCUS_04620	sequence45:270040..270234(-)	internal_stop_codon	270244..270246(-)		WP_011475509.1	substrate-binding domain-containing protein	100.0	19.4	45.3
MGA_519	LOCUS_04630	sequence45:270244..271023(-)	internal_stop_codon	270244..270246(-)		WP_002263455.1	sugar ABC transporter substrate-binding protein	92.7	74.4	47.3
MGA_562	LOCUS_05050	sequence46:93..266(-)	frameshift		325	WP_003547366.1	nucleoside phosphorylase	100.0	22.3	78.9
MGA_563	LOCUS_05060	sequence46:284..853(-)	frameshift		328	WP_003547366.1	nucleoside phosphorylase	98.9	73.0	62.0
MGA_571	LOCUS_05130	sequence46:7299..8219(+)	partial			WP_011173018.1	ABC transporter ATP-binding protein	72.5	71.9	37.4
MGA_573	LOCUS_05150	sequence46:9053..9709(-)	partial			WP_003644056.1	helix-turn-helix transcriptional regulator	80.7	69.6	31.1
MGA_575	LOCUS_05170	sequence46:11419..11817(+)	internal_stop_codon	11311..11313(+)		WP_011254351.1	DUF5052 family protein	100.0	65.3	82.6
MGA_576	LOCUS_05180	sequence46:11861..12298(-)	partial			WP_003548672.1	DUF805 domain-containing protein	97.2	42.1	37.6
MGA_597	LOCUS_05390	sequence46:36129..37790(-)	frameshift		37858	WP_011254365.1	helicase C-terminal domain-containing protein	97.3	58.0	84.8
MGA_598	LOCUS_05400	sequence46:37799..38911(-)	frameshift		37861	WP_011254365.1	helicase C-terminal domain-containing protein	94.9	38.0	83.8
MGA_726	LOCUS_06650	sequence46:181757..182554(-)	partial			WP_003549636.1	helix-turn-helix transcriptional regulator	49.1	79.1	33.6
MGA_728	LOCUS_06670	sequence46:183130..184419(-)	partial			WP_003548819.1	LTA synthase family protein	100.0	43.1	61.4
MGA_780	LOCUS_07180	sequence46:236180..236572(+)	internal_stop_codon	236570..236572(+)		WP_003548046.1	M57 family metalloprotease	100.0	62.2	39.9
MGA_781	LOCUS_07190	sequence46:236573..236824(+)	internal_stop_codon	236570..236572(+)		WP_003548046.1	M57 family metalloprotease	100.0	37.4	62.7
MGA_834	LOCUS_07720	sequence46:283202..283900(-)	partial			WP_004255227.1	biotin--[acetyl-CoA-carboxylase] ligase	98.3	74.3	40.4
MGA_850	LOCUS_07880	sequence46:297698..298612(-)	internal_stop_codon	297698..297700(-)		WP_003548138.1	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	100.0	82.2	94.4
MGA_871	LOCUS_08090	sequence46:323482..324633(+)	internal_stop_codon	324631..324633(+)		WP_011836501.1	alpha-galactosidase	100.0	51.7	42.2
MGA_872	LOCUS_08100	sequence46:324652..325707(+)	internal_stop_codon	324631..324633(+)		WP_011836501.1	alpha-galactosidase	100.0	47.4	46.5
MGA_874	LOCUS_08120	sequence46:326944..328539(-)	partial			WP_003548412.1	SLAP domain-containing protein	99.6	68.6	26.8
MGA_877	LOCUS_08150	sequence46:330986..331129(-)	frameshift		331130	WP_003548236.1	DHA2 family efflux MFS transporter permease subunit	93.6	9.4	70.5
MGA_880	LOCUS_08180	sequence46:333675..333839(-)	partial			WP_003548242.1	ABC transporter	100.0	17.9	61.1
MGA_882	LOCUS_08200	sequence46:334215..334571(-)	internal_stop_codon	334215..334217(-)		WP_003548242.1	ABC transporter	99.2	39.5	46.2
MGA_887	LOCUS_08250	sequence46:338955..339185(-)	partial			WP_003548250.1	YqgQ family protein	67.1	70.8	96.1
MGA_934	LOCUS_08710	sequence46:385752..387653(-)	partial			WP_003548886.1	SLAP domain-containing protein	73.6	76.8	25.2
MGA_947	LOCUS_08840	sequence46:394779..394955(-)	internal_stop_codon	394965..394967(-)		WP_065904166.1	Y-family DNA polymerase	98.3	13.1	52.6
MGA_948	LOCUS_08850	sequence46:394965..395981(-)	internal_stop_codon	394965..394967(-)		WP_003564452.1	Y-family DNA polymerase	99.1	75.9	50.3
MGA_986	LOCUS_09210	sequence46:437510..437869(+)	frameshift,internal_stop_codon	437424..437426(+)	437387,437702	WP_191620026.1	transposase	53.8	24.8	62.5
MGA_988	LOCUS_09230	sequence46:439007..439444(+)	frameshift		439354	WP_148255728.1	IS5 family transposase	80.0	46.8	55.2
MGA_994	LOCUS_09290	sequence46:444212..445186(-)	frameshift		444229	WP_188891678.1	amidohydrolase family protein	100.0	79.6	79.3
MGA_1002	LOCUS_09360	sequence46:454426..454881(-)	frameshift		454900	WP_003548498.1	polysaccharide biosynthesis protein	99.3	27.4	82.7
MGA_1003	LOCUS_09370	sequence46:454838..456073(-)	frameshift		454900	WP_003548498.1	polysaccharide biosynthesis protein	95.4	71.5	93.6
MGA_1006	LOCUS_09400	sequence46:459309..459536(+)	partial			WP_011254516.1	phosphatase PAP2 family protein	97.3	33.3	84.9
MGA_1008	LOCUS_09420	sequence46:460885..461565(+)	frameshift		461556	WP_009932838.1	carboxylating nicotinate-nucleotide diphosphorylase	99.1	80.4	48.2
MGA_1009	LOCUS_09430	sequence46:461501..461713(+)	frameshift		461556	WP_003229689.1	carboxylating nicotinate-nucleotide diphosphorylase	58.6	14.2	58.5
MGA_1011	LOCUS_09450	sequence46:463016..463774(-)	frameshift		463824	WP_011476123.1	prenyltransferase	99.6	83.7	58.7
MGA_1026	LOCUS_09600	sequence47:8808..9452(-)	partial			WP_003644479.1	fructosamine kinase family protein	46.3	35.7	60.0
MGA_1029	LOCUS_09630	sequence47:11609..12790(-)	frameshift		12885	WP_011254014.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	99.2	61.3	77.0
MGA_1030	LOCUS_09640	sequence47:12883..13578(-)	frameshift		12939	WP_011254014.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	91.8	33.2	74.1
MGA_1052	LOCUS_09840	sequence47:34037..34306(-)	partial			WP_010905287.1	MFS transporter	51.7	11.7	52.2
MGA_1069	LOCUS_10000	sequence47:47684..48895(-)	partial			WP_013225085.1	MFS transporter	41.4	42.7	22.9
MGA_1102	LOCUS_10330	sequence47:86570..86728(+)	partial			WP_003549428.1	SPJ_0845 family protein	73.1	77.6	89.5
MGA_1113	LOCUS_10440	sequence47:95531..96265(-)	partial			WP_011475526.1	DUF4097 domain-containing protein	70.9	51.7	29.5
MGA_1128	LOCUS_10590	sequence47:112822..113256(-)	partial			WP_011254625.1	YdcF family protein	100.0	39.2	85.4
MGA_1137	LOCUS_10680	sequence47:120895..121773(-)	partial			WP_014565478.1	SLAP domain-containing protein	96.9	68.4	44.9
MGA_1162	LOCUS_10920	sequence47:147145..147894(+)	partial			WP_003641986.1	peptide cleavage/export ABC transporter	97.2	33.9	63.4
MGA_1165	LOCUS_10950	sequence47:149538..149936(+)	partial			WP_014566242.1	hypothetical protein	73.5	73.5	44.3
MGA_1203	LOCUS_11320	sequence47:189528..189845(+)	frameshift		189803	WP_003549614.1	glycerol kinase GlpK	87.6	18.4	88.0
MGA_1204	LOCUS_11330	sequence47:189847..191019(+)	frameshift		189803	WP_003549614.1	glycerol kinase GlpK	100.0	78.0	89.0
MGA_1226	LOCUS_11540	sequence47:217305..217931(+)	frameshift		217913	WP_011254595.1	peptide MFS transporter	97.6	40.8	92.6
MGA_1227	LOCUS_11550	sequence47:217954..218799(+)	frameshift		217913	WP_011254595.1	peptide MFS transporter	100.0	56.5	87.2
MGA_1234	LOCUS_11610	sequence47:224965..225546(-)	partial			WP_041272479.1	VanZ family protein	42.0	41.4	39.0
MGA_1236	LOCUS_11630	sequence47:226076..226543(-)	frameshift		226129	WP_011254274.1	Rgg/GadR/MutR family transcriptional regulator	94.2	52.8	33.3
MGA_1260	LOCUS_11870	sequence47:245614..247140(+)	frameshift		246897	WP_021721608.1	ABC transporter ATP-binding protein	83.7	68.1	91.5
MGA_1261	LOCUS_11880	sequence47:247023..247472(+)	frameshift		246897	WP_021721608.1	ABC transporter ATP-binding protein	100.0	23.9	94.0
MGA_1305	LOCUS_12310	sequence47:283587..283727(-)	partial			WP_000924721.1	Txe/YoeB family addiction module toxin	93.5	51.2	58.1
MGA_1323	LOCUS_12490	sequence47:296705..297526(-)	partial			WP_003549839.1	O-antigen ligase family protein	99.6	54.1	84.2
MGA_1340	LOCUS_12660	sequence47:311789..312718(+)	partial			WP_011101280.1	capsular polysaccharide synthesis protein	74.4	72.7	30.6
MGA_1345	LOCUS_12710	sequence47:317644..318147(+)	frameshift		318117	WP_012972561.1	IS110 family transposase	94.0	38.8	35.8
MGA_1346	LOCUS_12720	sequence47:318165..318587(+)	frameshift,internal_stop_codon	318043..318045(+),318055..318057(+),318061..318063(+),318013..318015(+)	317994,318570	WP_002495236.1	IS110-like element ISSep2 family transposase	98.6	40.9	30.4
MGA_1347	LOCUS_12730	sequence47:318652..318846(+)	frameshift		318572	WP_002495236.1	IS110-like element ISSep2 family transposase	92.2	17.5	47.5
MGA_1352	LOCUS_12780	sequence47:321250..321858(-)	partial			WP_002285820.1	ISL3 family transposase	98.5	51.6	38.0
MGA_1353	LOCUS_12790	sequence47:322371..322523(-)	partial			WP_011254207.1	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	100.0	13.2	80.0
MGA_1358	LOCUS_12830	sequence47:326792..329155(+)	frameshift		326720	WP_010941424.1	ATP-dependent RecD-like DNA helicase	96.7	81.0	32.6
MGA_1361	LOCUS_12860	sequence47:330964..333162(+)	partial			WP_004399367.1	P-loop NTPase fold protein	81.8	46.7	26.5
MGA_1363	LOCUS_12880	sequence47:333427..333978(+)	partial			WP_011015784.1	NAD-dependent DNA ligase LigA	90.2	22.8	30.5
MGA_1385	LOCUS_13100	sequence47:358186..358797(+)	partial			WP_148335055.1	IS3 family transposase	84.2	51.5	35.5
MGA_1387	LOCUS_13110	sequence47:360010..360402(-)	frameshift		360442	WP_003549893.1	IS110 family transposase	89.2	28.4	64.7
MGA_1392	LOCUS_13150	sequence47:367453..367689(+)	partial			WP_003550005.1	amino acid ABC transporter substrate-binding protein	100.0	28.7	79.5
MGA_1398	LOCUS_13210	sequence47:371126..371338(-)	frameshift		371367	WP_003550019.1	DUF1304 domain-containing protein	81.4	47.5	87.7
MGA_1399	LOCUS_13220	sequence47:371296..371478(-)	frameshift		371367	WP_003550019.1	DUF1304 domain-containing protein	61.7	30.8	86.5
MGA_1408	LOCUS_13310	sequence47:379175..381241(-)	partial			WP_011254532.1	surface protein	72.2	72.6	63.0
MGA_1411	LOCUS_13330	sequence47:384210..384839(+)	partial			WP_003550047.1	LPXTG cell wall anchor domain-containing protein	84.2	15.7	27.1
MGA_1412	LOCUS_13340	sequence47:385020..386279(+)	internal_stop_codon	384837..384839(+)		WP_011254532.1	surface protein	90.5	55.6	40.5
MGA_1433	LOCUS_13540	sequence47:410879..411547(-)	frameshift		410887	WP_011254520.1	alpha/beta hydrolase	99.1	83.3	75.9
MGA_1456	LOCUS_13770	sequence48:23304..23915(+)	partial			WP_011086153.1	isochorismatase family protein	97.5	37.8	41.9
MGA_1507	LOCUS_14270	sequence48:62075..63256(+)	partial			WP_003546240.1	MFS transporter	29.5	68.6	75.0
MGA_1508	LOCUS_14280	sequence48:63275..65377(+)	partial			WP_005815859.1	response regulator	11.7	31.7	39.0
MGA_1516	LOCUS_14350	sequence48:74838..75230(+)	frameshift		75206	WP_003546242.1	PTS sugar transporter subunit IIC	94.6	35.4	78.0
MGA_1517	LOCUS_14360	sequence48:75224..75856(+)	frameshift		75209	WP_003546242.1	PTS sugar transporter subunit IIC	100.0	62.0	71.6
MGA_1529	LOCUS_14480	sequence48:89212..89469(+)	internal_stop_codon	89209..89211(+)		WP_003546265.1	calcium-translocating P-type ATPase, PMCA-type	100.0	9.6	88.2
MGA_1547	LOCUS_14650	sequence48:108747..109856(+)	internal_stop_codon	109854..109856(+)		WP_003546298.1	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	100.0	81.8	48.2
MGA_1553	LOCUS_14700	sequence48:113326..113619(+)	partial			WP_003546333.1	oleate hydratase	91.8	15.1	86.5
MGA_1554	LOCUS_14710	sequence48:113651..114724(+)	partial			WP_003546333.1	oleate hydratase	100.0	60.5	92.4
MGA_1558	LOCUS_14740	sequence48:118322..118819(-)	partial			WP_003721639.1	PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC	81.8	50.6	56.3
MGA_1691	LOCUS_16040	sequence48:256913..257071(+)	partial			WP_003546573.1	glucose-1-phosphate adenylyltransferase subunit GlgD	96.2	13.2	74.0
MGA_1732	LOCUS_16440	sequence48:306982..308424(-)	frameshift		308402	WP_003546656.1	APC family permease	95.0	84.3	88.6
MGA_1737	LOCUS_16480	sequence48:310830..311885(+)	frameshift		311873	WP_011254604.1	RNA-guided endonuclease TnpB family protein	67.5	78.5	56.1
MGA_1753	LOCUS_16640	sequence48:325169..325858(+)	partial			WP_011254515.1	YSIRK-type signal peptide-containing protein	97.8	27.9	26.6
MGA_1754	LOCUS_16650	sequence48:325855..342522(+)	partial			WP_013246158.1	MBG domain-containing protein	17.4	41.0	24.7
MGA_1755	LOCUS_16660	sequence48:342866..343456(+)	partial			WP_012972561.1	IS110 family transposase	81.1	39.2	36.0
MGA_1756	LOCUS_16670	sequence48:343559..344197(-)	frameshift		344204	WP_003549893.1	IS110 family transposase	99.5	51.7	89.6
MGA_1757	LOCUS_16680	sequence48:344175..344753(-)	frameshift		344204	WP_003549893.1	IS110 family transposase	97.9	46.1	89.4
MGA_1758	LOCUS_16690	sequence48:345382..345597(-)	frameshift		345402	WP_000152348.1	IS66 family insertion sequence element accessory protein TnpB	90.1	55.2	81.2
MGA_1760	LOCUS_16710	sequence48:351389..351985(+)	frameshift		351986,352085,351895	WP_000453221.1	ISLre2 family transposase	76.3	33.8	26.5
MGA_1771	LOCUS_16810	sequence48:364608..365420(+)	partial			WP_011122377.1	TIGR02452 family protein	69.6	70.1	34.5
MGA_1851	LOCUS_17610	sequence48:447884..448318(-)	frameshift,internal_stop_codon	448405..448407(-)	448413	WP_003546833.1	YegS/Rv2252/BmrU family lipid kinase	100.0	45.7	70.1
MGA_1852	LOCUS_17620	sequence48:448399..448830(-)	frameshift,internal_stop_codon	448405..448407(-)	448413	WP_003546833.1	YegS/Rv2252/BmrU family lipid kinase	97.2	44.1	68.3
MGA_1890	LOCUS_18000	sequence48:488514..489200(-)	frameshift		489247	WP_011476555.1	helix-turn-helix domain-containing protein	95.6	64.3	50.9
MGA_1891	LOCUS_18010	sequence48:489239..489496(-)	frameshift		489247	WP_011476555.1	helix-turn-helix domain-containing protein	98.8	26.0	44.3
MGA_1895	LOCUS_18050	sequence48:493166..493444(-)	frameshift		493715	WP_011254276.1	GntR family transcriptional regulator	98.9	38.9	89.0
MGA_1896	LOCUS_18060	sequence48:493707..493871(-)	frameshift		493715	WP_011254276.1	GntR family transcriptional regulator	96.3	22.2	88.5
MGA_1924	LOCUS_18340	sequence48:522870..523613(+)	internal_stop_codon	523611..523613(+)		WP_003547002.1	C1 family peptidase	100.0	56.5	87.4
MGA_1925	LOCUS_18350	sequence48:523695..524183(+)	internal_stop_codon	523611..523613(+)		WP_003547002.1	C1 family peptidase	100.0	37.1	93.2
MGA_1948	LOCUS_18570	sequence48:543762..544130(-)	frameshift,internal_stop_codon	543743..543745(-)	543797	WP_003547741.1	mucus-binding protein	86.1	14.5	45.3
MGA_1961	LOCUS_18690	sequence48:557988..558404(+)	frameshift		558359	WP_003547045.1	aldo/keto reductase	92.0	46.9	81.1
MGA_1962	LOCUS_18700	sequence48:558389..558823(+)	frameshift		558359	WP_003547045.1	aldo/keto reductase	95.1	50.6	81.0
MGA_1991	LOCUS_18990	sequence48:589388..590152(+)	internal_stop_codon	590150..590152(+)		WP_003547113.1	tetratricopeptide repeat protein	99.2	60.7	86.9
MGA_1992	LOCUS_19000	sequence48:590153..590635(+)	internal_stop_codon	590150..590152(+)		WP_003547113.1	tetratricopeptide repeat protein	100.0	38.6	88.8
MGA_2028	LOCUS_19350	sequence48:629538..630641(-)	frameshift		630733	WP_003548393.1	MATE family efflux transporter	100.0	82.7	70.6
MGA_2041	LOCUS_19470	sequence48:642999..644549(+)	partial			WP_002368726.1	type IV secretory system conjugative DNA transfer family protein	73.1	58.7	29.4
MGA_2042	LOCUS_19480	sequence48:644625..644981(-)	internal_stop_codon	645000..645002(-)		WP_201247873.1	glycosyltransferase	100.0	31.9	100.0
MGA_2043	LOCUS_19490	sequence48:645000..645737(-)	internal_stop_codon	645000..645002(-)		WP_201247873.1	glycosyltransferase	100.0	66.2	100.0
MGA_2055	LOCUS_19610	sequence48:656766..657686(+)	frameshift		657551	WP_013098234.1	PTS cellobiose transporter subunit IIC	83.7	58.5	32.7
MGA_2056	LOCUS_19620	sequence48:657728..658093(+)	frameshift		657466,657551	WP_010905577.1	PTS sugar transporter subunit IIC	98.3	25.0	49.2
MGA_2067	LOCUS_19730	sequence48:671371..672591(+)	partial			WP_145225398.1	restriction endonuclease subunit S	49.3	49.1	28.1
MGA_2082	LOCUS_19860	sequence48:690193..691218(-)	partial			WP_011476405.1	C39 family peptidase	69.8	26.9	46.7
MGA_2085	LOCUS_19890	sequence48:692414..694054(-)	partial			WP_003548412.1	SLAP domain-containing protein	70.5	54.6	28.7
MGA_2089	LOCUS_19930	sequence48:697185..698117(+)	partial			WP_003548886.1	SLAP domain-containing protein	83.2	50.3	24.7
MGA_2105	LOCUS_20070	sequence48:714192..714764(+)	frameshift		714761	WP_011202734.1	dihydrofolate reductase family protein	98.9	84.0	45.8
MGA_2136	LOCUS_20380	sequence48:745820..746023(-)	partial			WP_003547185.1	GNAT family N-acetyltransferase	82.1	60.5	46.8
MGA_2146	LOCUS_20480	sequence48:755165..755662(+)	internal_stop_codon	755660..755662(+)		WP_003547292.1	aldo/keto reductase	100.0	57.1	86.1
MGA_2147	LOCUS_20490	sequence48:755705..756034(+)	internal_stop_codon	755660..755662(+)		WP_003547292.1	aldo/keto reductase	100.0	37.7	87.2
MGA_2158	LOCUS_20600	sequence48:763113..763868(+)	partial			WP_011254014.1	TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein	98.4	38.5	40.1
MGA_2159	LOCUS_20610	sequence48:763889..764290(+)	partial			WP_011673933.1	TMEM175 family protein	89.5	60.4	50.4
MGA_2161	LOCUS_20630	sequence48:765794..766012(-)	frameshift,internal_stop_codon	765794..765796(-),766064..766066(-)	766238,766070,765751	WP_154549573.1	IS3 family transposase	91.7	15.7	63.6
MGA_2163	LOCUS_20650	sequence48:766389..767069(-)	partial			WP_010922506.1	MmcQ/YjbR family DNA-binding protein	55.3	36.2	40.0
MGA_2168	LOCUS_20700	sequence48:770993..771508(+)	partial			WP_003548672.1	DUF805 domain-containing protein	96.5	50.8	37.3
MGA_2176	LOCUS_20780	sequence48:776969..778423(+)	partial			WP_003243926.1	para-nitrobenzyl esterase	75.8	73.6	32.1
MGA_2185	LOCUS_20870	sequence48:788368..790146(+)	partial			WP_011254336.1	helicase	98.3	44.3	33.1
MGA_2198	LOCUS_21000	sequence48:802477..803220(+)	partial			WP_117118241.1	AEC family transporter	94.3	73.3	70.8
MGA_2201	LOCUS_21030	sequence48:804398..807940(+)	partial			WP_011986302.1	SNF2 helicase associated domain-containing protein	54.4	59.4	39.4
MGA_2209	LOCUS_21110	sequence48:816804..817169(+)	partial			WP_003547489.1	YoaK family protein	97.5	50.2	83.1
MGA_2219	LOCUS_21210	sequence48:823122..823457(-)	partial			WP_003547496.1	ABC transporter ATP-binding protein	100.0	21.1	68.5
MGA_2221	LOCUS_21220	sequence48:825315..825857(-)	internal_stop_codon	825924..825926(-)		WP_003548575.1	ABC transporter ATP-binding protein	98.3	33.4	75.7
MGA_2222	LOCUS_21230	sequence48:825924..826904(-)	internal_stop_codon	825924..825926(-)		WP_003548575.1	ABC transporter ATP-binding protein	100.0	61.5	71.5
