{ "type": "genome", "identifier": "GCF_000159635.1", "organism": "Corynebacterium lipophiloflavum DSM 44291", "title": "Corynebacterium lipophiloflavum DSM 44291", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Baylor College of Medicine", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000159635.1", "bioproject": "PRJNA224116", "biosample": "SAMN00001476", "wgs_master": "ACHJ00000000.1", "refseq_category": "reference genome", "taxid": "525263", "species_taxid": "161889", "organism_name": "Corynebacterium lipophiloflavum DSM 44291", "infraspecific_name": "strain=DSM 44291", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2009/05/05", "asm_name": "ASM15963v1", "asm_submitter": "Baylor College of Medicine", "gbrs_paired_asm": "GCA_000159635.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/159/635/GCF_000159635.1_ASM15963v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "2385784", "genome_size_ungapped": "2293743", "gc_percent": "65.000000", "replicon_count": "0", "scaffold_count": "77", "contig_count": "178", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_000159635.1-RS_2024_05_01", "annotation_date": "2024-05-01", "total_gene_count": "2353", "protein_coding_gene_count": "2213", "non_coding_gene_count": "56", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2009-05-05", "dateModified": "2009-05-05", "datePublished": "2009-05-05", "_annotation": { "sample_count": 1, "sample_organism": [ "Corynebacterium lipophiloflavum DSM 44291" ], "sample_taxid": [ "525263" ], "sample_host_organism": [ "Homo sapiens" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "not determined" ], "sample_host_location_id": [], "data_size": "0.644 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 95.37, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "2385784", "Number of Sequences": "77", "Longest Sequences (bp)": "749727", "N50 (bp)": "639586", "Gap Ratio (%)": "3.857893", "GCcontent (%)": "64.8", "Number of CDSs": "2243", "Average Protein Length": "303.8", "Coding Ratio (%)": "85.7", "Number of rRNAs": "3", "Number of tRNAs": "53", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Corynebacterium lipophiloflavum", "strain": "strain=DSM 44291", "accession": "GCA_000159635.1", "taxid": 161889, 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