# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_9	LOCUS_00020	sequence006:63..248(-)	frameshift		97,250,82,55	WP_010980932.1	IS1595 family transposase	82.0	23.0	96.0
MGA_13	LOCUS_00040	sequence008:97..510(-)	frameshift		48,138	WP_010980932.1	IS1595 family transposase	90.5	57.1	87.1
MGA_14	LOCUS_00050	sequence009:9..398(-)	frameshift		443,476,566	WP_010980932.1	IS1595 family transposase	99.2	59.0	95.3
MGA_15	LOCUS_00060	sequence010:311..535(-)	frameshift		595,637	WP_001467912.1	ribonuclease I	100.0	27.6	98.6
MGA_19	LOCUS_00080	sequence013:1..526(+)	frameshift		781,415	WP_002247616.1	hemagglutinin repeat-containing protein	82.2	5.7	77.6
MGA_20	LOCUS_00090	sequence013:436..786(+)	frameshift		781,415	WP_002247616.1	hemagglutinin repeat-containing protein	99.1	4.6	78.3
MGA_23	LOCUS_00100	sequence015:117..302(-)	frameshift		96,483,309,150,135	WP_010980932.1	IS1595 family transposase	82.0	23.0	96.0
MGA_24	LOCUS_00110	sequence015:382..609(-)	frameshift		481,610,307,148,133,634,94	WP_025459692.1	IS1595 family transposase	56.0	19.4	95.2
MGA_32	LOCUS_00140	sequence021:18..308(-)	partial			WP_010981060.1	ComEA family DNA-binding protein	93.8	58.4	92.2
MGA_39	LOCUS_00150	sequence027:1..617(+)	internal_stop_codon	615..617(+)		WP_014206787.1	hemagglutinin repeat-containing protein	96.6	4.4	37.9
MGA_47	LOCUS_00190	sequence030:1461..1598(+)	frameshift		1592,1691	WP_002219738.1	DUF2523 domain-containing protein	88.9	41.7	70.0
MGA_48	LOCUS_00200	sequence030:1804..1929(+)	frameshift		1795,1903	WP_002219739.1	zonular occludens toxin domain-containing protein	85.4	9.7	94.3
MGA_51	LOCUS_00220	sequence031:613..1185(-)	partial			WP_003704451.1	polymorphic toxin MafB class 2	41.1	12.4	73.1
MGA_52	LOCUS_00230	sequence031:1334..>2072(-)	partial			WP_014206787.1	hemagglutinin repeat-containing protein	69.0	3.6	36.7
MGA_53	LOCUS_00240	sequence032:55..1383(+)	partial			WP_014206787.1	hemagglutinin repeat-containing protein	53.6	5.7	35.1
MGA_58	LOCUS_00280	sequence033:2055..2441(-)	frameshift		2521	WP_010980932.1	IS1595 family transposase	100.0	59.0	94.5
MGA_65	LOCUS_00340	sequence035:2883..3092(-)	frameshift		3118	WP_002235716.1	IS110 family transposase	100.0	21.7	88.4
MGA_67	LOCUS_00350	sequence036:1..920(+)	partial			WP_003704451.1	polymorphic toxin MafB class 2	65.9	32.0	86.1
MGA_69	LOCUS_00370	sequence036:2792..2980(+)	frameshift		2618	WP_014206787.1	hemagglutinin repeat-containing protein	96.8	1.4	43.3
MGA_77	LOCUS_00430	sequence038:1..1617(+)	partial			WP_014206787.1	hemagglutinin repeat-containing protein	51.1	6.3	38.9
MGA_81	LOCUS_00470	sequence038:3474..3833(-)	partial			WP_002225050.1	IS5 family transposase	95.0	33.7	92.9
MGA_84	LOCUS_00490	sequence039:2701..2931(+)	frameshift		2901	WP_002225623.1	ShlB/FhaC/HecB family hemolysin secretion/activation protein	94.7	12.1	87.5
MGA_85	LOCUS_00500	sequence039:2931..3422(+)	frameshift,internal_stop_codon	3421..3423(+)	3612,2901	WP_002225623.1	ShlB/FhaC/HecB family hemolysin secretion/activation protein	100.0	27.4	81.0
MGA_86	LOCUS_00510	sequence039:3432..3734(+)	frameshift,internal_stop_codon	3420..3422(+)	3611	WP_002225623.1	ShlB/FhaC/HecB family hemolysin secretion/activation protein	61.0	10.3	73.8
MGA_89	LOCUS_00530	sequence040:667..819(+)	frameshift		801	WP_002219739.1	zonular occludens toxin domain-containing protein	90.0	12.5	93.3
MGA_90	LOCUS_00540	sequence040:861..1718(+)	frameshift		801	WP_002219739.1	zonular occludens toxin domain-containing protein	98.6	77.6	64.7
MGA_91	LOCUS_00550	sequence040:2579..2953(+)	internal_stop_codon	2951..2953(+)		WP_033910908.1	IS110 family transposase	100.0	38.8	51.6
MGA_92	LOCUS_00560	sequence040:2963..3544(+)	internal_stop_codon	2951..2953(+)		WP_010951198.1	IS110-like element ISNgo2 family transposase	100.0	60.0	43.8
MGA_93	LOCUS_00570	sequence041:67..1314(+)	frameshift		67	WP_014206787.1	hemagglutinin repeat-containing protein	36.9	3.5	43.1
MGA_95	LOCUS_00590	sequence041:2902..3798(+)	frameshift		2824,2891	WP_122974009.1	IS3 family transposase	95.3	64.8	46.4
MGA_98	LOCUS_00610	sequence042:1254..2651(-)	partial			WP_002247616.1	hemagglutinin repeat-containing protein	34.6	6.4	69.6
MGA_100	LOCUS_00630	sequence042:3055..>4418(-)	partial			WP_002247616.1	hemagglutinin repeat-containing protein	47.2	8.6	59.3
MGA_103	LOCUS_00650	sequence044:1..2151(+)	partial			WP_014206787.1	hemagglutinin repeat-containing protein	38.7	6.2	39.2
MGA_104	LOCUS_00660	sequence044:2689..3159(+)	partial			WP_014206787.1	hemagglutinin repeat-containing protein	92.3	3.3	47.2
MGA_111	LOCUS_00720	sequence045:3648..4484(-)	frameshift		4516	WP_002225623.1	ShlB/FhaC/HecB family hemolysin secretion/activation protein	99.6	46.6	92.4
MGA_112	LOCUS_00730	sequence045:4421..5074(-)	frameshift		4514,5123,5171,5159,5084,5117	WP_002225623.1	ShlB/FhaC/HecB family hemolysin secretion/activation protein	85.7	31.3	73.7
MGA_119	LOCUS_00800	sequence046:4786..5085(-)	frameshift		5108	WP_010981060.1	ComEA family DNA-binding protein	82.8	53.2	95.1
MGA_131	LOCUS_00910	sequence048:4983..5132(-)	frameshift		5296	WP_002219822.1	DUF6037 family protein	100.0	23.0	91.8
MGA_132	LOCUS_00920	sequence048:5252..5614(-)	frameshift		5296	WP_002219822.1	DUF6037 family protein	86.7	49.3	90.5
MGA_143	LOCUS_00990	sequence052:162..1028(+)	frameshift		9,115,93	WP_010951374.1	MafB family polymorphic toxin	100.0	55.4	69.2
MGA_147	LOCUS_01030	sequence052:1801..2754(+)	partial			WP_010951171.1	polymorphic toxin MafB class 3	53.3	36.1	88.2
MGA_148	LOCUS_01040	sequence052:2720..2926(+)	partial			WP_120770698.1	CPCC family cysteine-rich protein	91.2	50.8	80.6
MGA_151	LOCUS_01070	sequence052:4143..4418(+)	partial			WP_048526253.1	T7SS effector LXG polymorphic toxin	72.5	13.1	50.0
MGA_160	LOCUS_01140	sequence053:3159..4853(+)	frameshift		4820	WP_167395505.1	TonB-dependent siderophore receptor	98.2	78.6	86.3
MGA_161	LOCUS_01150	sequence053:4853..5275(+)	frameshift		4823	WP_167395505.1	TonB-dependent siderophore receptor	100.0	19.9	93.6
MGA_179	LOCUS_01300	sequence056:579..920(+)	frameshift		304	WP_002225050.1	IS5 family transposase	100.0	33.7	92.0
MGA_181	LOCUS_01320	sequence056:1581..1973(+)	frameshift,internal_stop_codon	1972..1974(+)	1578	WP_002225623.1	ShlB/FhaC/HecB family hemolysin secretion/activation protein	99.2	21.8	65.4
MGA_182	LOCUS_01330	sequence056:2010..3038(+)	internal_stop_codon	1971..1973(+)		WP_002225623.1	ShlB/FhaC/HecB family hemolysin secretion/activation protein	100.0	57.5	62.3
MGA_186	LOCUS_01360	sequence057:4840..6363(+)	partial			WP_010980980.1	IgG-binding virulence factor TspB family protein	63.1	63.9	77.3
MGA_215	LOCUS_01620	sequence060:7550..7966(-)	partial			WP_002225362.1	replicative DNA helicase	84.1	24.8	97.4
MGA_227	LOCUS_01740	sequence061:10994..12691(+)	frameshift		10932	WP_002225580.1	chromosome segregation protein SMC	100.0	48.7	90.8
MGA_229	LOCUS_01760	sequence062:1..1002(+)	partial			WP_002221999.1	polymorphic toxin MafB class 1	100.0	71.3	90.7
MGA_245	LOCUS_01920	sequence062:12592..12873(-)	frameshift		13096	WP_002216438.1	lipopolysaccharide transport periplasmic protein LptA	97.8	54.0	85.3
MGA_251	LOCUS_01970	sequence063:2567..7591(+)	partial			WP_010951407.1	adhesion and penetration autotransporter App	65.2	74.9	79.8
MGA_260	LOCUS_02060	sequence064:256..1164(+)	frameshift		97	WP_002221846.1	elongation factor Tu	100.0	76.9	98.0
MGA_267	LOCUS_02130	sequence064:4749..7979(+)	frameshift		7973	WP_002224771.1	DNA-directed RNA polymerase subunit beta	99.9	77.2	98.7
MGA_268	LOCUS_02140	sequence064:8015..8926(+)	frameshift		7973	WP_002224771.1	DNA-directed RNA polymerase subunit beta	100.0	21.8	99.0
MGA_269	LOCUS_02150	sequence064:9078..10895(+)	frameshift		10880,11030	WP_002218564.1	DNA-directed RNA polymerase subunit beta'	99.5	43.3	97.7
MGA_270	LOCUS_02160	sequence064:11038..13251(+)	frameshift		10880,11033	WP_002218564.1	DNA-directed RNA polymerase subunit beta'	100.0	53.0	98.5
MGA_292	LOCUS_02370	sequence065:15647..16675(-)	frameshift,internal_stop_codon	16693..16695(-),16690..16692(-)	16701	WP_003752201.1	putative peptidoglycan glycosyltransferase FtsW	100.0	78.3	82.2
MGA_293	LOCUS_02380	sequence065:16672..16980(-)	frameshift,internal_stop_codon	16693..16695(-),16690..16692(-)	16972,16701	WP_003752201.1	putative peptidoglycan glycosyltransferase FtsW	66.7	15.6	73.5
MGA_296	LOCUS_02400	sequence066:438..932(+)	partial			WP_002244044.1	polymorphic toxin MafB class 2	100.0	27.0	97.6
MGA_308	LOCUS_02520	sequence066:12548..12889(-)	partial			WP_122722792.1	IS3-like element ISPsy8 family transposase	99.1	24.7	35.4
MGA_322	LOCUS_02650	sequence067:5412..6194(-)	partial			WP_002219437.1	KilA-N domain-containing protein	75.0	65.2	40.2
MGA_338	LOCUS_02810	sequence067:17291..18343(-)	partial			WP_013098050.1	DUF1073 domain-containing protein	64.3	43.9	44.3
MGA_368	LOCUS_03100	sequence069:1602..2828(-)	frameshift,internal_stop_codon	2882..2884(-)	2914	WP_002864485.1	type II CRISPR RNA-guided endonuclease Cas9	60.5	22.3	22.9
MGA_369	LOCUS_03110	sequence069:2825..4825(-)	frameshift,internal_stop_codon	2882..2884(-)	2914	WP_002864485.1	type II CRISPR RNA-guided endonuclease Cas9	98.5	64.1	33.4
MGA_379	LOCUS_03210	sequence069:16337..16843(-)	frameshift		16877	WP_003704930.1	glycosyltransferase	100.0	43.3	83.3
MGA_380	LOCUS_03220	sequence069:16818..17504(-)	frameshift		16886	WP_003704930.1	glycosyltransferase	97.4	57.2	86.5
MGA_381	LOCUS_03230	sequence069:17524..18021(-)	frameshift		18109	WP_003704929.1	glycosyltransferase family 4 protein	100.0	46.6	84.2
MGA_382	LOCUS_03240	sequence069:17984..18595(-)	frameshift		18109	WP_003704929.1	glycosyltransferase family 4 protein	86.2	48.9	92.0
MGA_390	LOCUS_03310	sequence070:165..524(+)	frameshift		115,142,139,118	WP_180298734.1	FimV/HubP family polar landmark-like protein TspA	100.0	13.4	81.7
MGA_394	LOCUS_03350	sequence070:3292..4092(+)	frameshift		3281	WP_197712461.1	phosphorylcholine kinase LicA	100.0	78.1	61.8
MGA_395	LOCUS_03360	sequence070:4299..4970(+)	partial			WP_005672105.1	choline transport protein LicB	96.9	74.0	53.7
MGA_401	LOCUS_03420	sequence070:9866..10000(-)	frameshift		10004	WP_010951319.1	glucose-6-phosphate isomerase	100.0	8.0	97.7
MGA_403	LOCUS_03440	sequence070:10384..11511(-)	frameshift		10608	WP_002224874.1	glucose-6-phosphate isomerase	80.3	55.0	89.7
MGA_420	LOCUS_03600	sequence071:3..521(+)	partial			WP_111723554.1	IS3-like element ISHin1 family transposase	88.4	34.4	51.3
MGA_421	LOCUS_03610	sequence071:642..983(+)	partial			WP_009348598.1	IS5 family transposase	100.0	34.9	90.3
MGA_426	LOCUS_03660	sequence071:6349..6849(+)	partial			WP_003691510.1	type I-C CRISPR-associated protein Cas8c/Csd1	93.4	53.8	87.1
MGA_432	LOCUS_03720	sequence071:12010..12444(+)	internal_stop_codon	12442..12444(+)		WP_000826425.1	RNA-guided endonuclease TnpB family protein	97.2	35.1	57.0
MGA_433	LOCUS_03730	sequence071:12445..13146(+)	internal_stop_codon	13144..13146(+),13147..13149(+),12442..12444(+)		WP_001310055.1	RNA-guided endonuclease TnpB family protein	99.6	58.0	57.1
MGA_458	LOCUS_03980	sequence072:13951..14151(+)	frameshift		14139	WP_002261325.1	acyltransferase family protein	98.5	10.4	95.4
MGA_465	LOCUS_04050	sequence072:19749..20186(-)	frameshift		20305	WP_010951397.1	glycosyltransferase family 4 protein	100.0	41.3	89.7
MGA_466	LOCUS_04060	sequence072:20102..20800(-)	frameshift		20305	WP_010951397.1	glycosyltransferase family 4 protein	76.3	50.4	89.8
MGA_481	LOCUS_04200	sequence073:6357..6665(+)	partial			WP_002215148.1	hypothetical protein	67.6	67.6	49.3
MGA_489	LOCUS_04280	sequence073:12586..12879(+)	partial			WP_002225742.1	DUF4298 domain-containing protein	73.2	67.6	93.0
MGA_513	LOCUS_04500	sequence074:6638..6898(-)	frameshift		6908	WP_002225759.1	decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase	100.0	17.8	93.0
MGA_514	LOCUS_04510	sequence074:6906..8087(-)	frameshift		6911	WP_002225759.1	decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase	100.0	81.5	92.4
MGA_517	LOCUS_04540	sequence074:10414..10644(-)	partial			WP_002221786.1	DUF2061 domain-containing protein	59.2	62.5	84.4
MGA_534	LOCUS_04700	sequence075:582..881(+)	frameshift		550,543	WP_010981060.1	ComEA family DNA-binding protein	82.8	53.2	95.1
MGA_536	LOCUS_04720	sequence075:1425..1793(-)	partial			WP_055032204.1	5'-nucleotidase	100.0	39.1	64.8
MGA_539	LOCUS_04750	sequence075:3680..5167(-)	frameshift		5120,3694	WP_010951213.1	DUF3418 domain-containing protein	96.2	44.2	87.8
MGA_540	LOCUS_04760	sequence075:5049..6428(-)	frameshift		5120	WP_010951213.1	DUF3418 domain-containing protein	91.7	39.1	91.2
MGA_542	LOCUS_04780	sequence075:7525..8220(-)	frameshift		8221	WP_038499775.1	HindVP family restriction endonuclease	100.0	65.8	69.3
MGA_543	LOCUS_04790	sequence075:8189..8575(-)	frameshift		8221	WP_038499775.1	HindVP family restriction endonuclease	89.8	32.8	64.3
MGA_565	LOCUS_05000	sequence076:243..611(-)	frameshift		64,281,58,221,31	WP_002225050.1	IS5 family transposase	89.3	32.5	94.5
MGA_572	LOCUS_05070	sequence076:5418..5975(-)	frameshift		6147	WP_011815729.1	site-specific integrase	64.9	26.3	35.0
MGA_574	LOCUS_05090	sequence076:6767..7399(-)	partial			WP_011815728.1	site-specific integrase	91.0	45.4	36.9
MGA_580	LOCUS_05150	sequence076:11626..11994(-)	partial			WP_004198812.1	transcriptional regulator	66.4	59.0	47.6
MGA_589	LOCUS_05240	sequence076:19740..21068(+)	frameshift		21038	WP_003702540.1	ATP-dependent chaperone ClpB	99.1	51.0	96.3
MGA_590	LOCUS_05250	sequence076:21059..22318(+)	frameshift		21038	WP_002225096.1	ATP-dependent chaperone ClpB	100.0	48.8	97.6
MGA_596	LOCUS_05310	sequence076:27217..27378(+)	partial			WP_010358395.1	hypothetical protein	60.4	60.4	93.8
MGA_603	LOCUS_05380	sequence076:34629..34850(-)	frameshift		34857	WP_002222496.1	IS110-like element ISNgo3 family transposase	97.3	22.3	46.5
MGA_626	LOCUS_05610	sequence077:23737..23952(+)	frameshift		23892	WP_002222850.1	Maf family nucleotide pyrophosphatase	100.0	35.1	77.5
MGA_627	LOCUS_05620	sequence077:23904..24344(+)	frameshift		23892	WP_002222850.1	Maf family nucleotide pyrophosphatase	100.0	72.3	93.8
MGA_629	LOCUS_05640	sequence077:24696..26630(+)	partial			WP_002244038.1	PglL family O-oligosaccharyltransferase	73.8	78.6	94.5
MGA_632	LOCUS_05670	sequence077:28905..30740(+)	frameshift		30584	WP_002244037.1	bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase	90.7	68.6	78.3
MGA_633	LOCUS_05680	sequence077:30628..31332(+)	frameshift		30584	WP_002244037.1	bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase	100.0	29.0	81.2
MGA_641	LOCUS_05760	sequence077:36516..37466(+)	partial			WP_100296084.1	YadA-like family protein	25.3	8.8	38.8
MGA_642	LOCUS_05770	sequence077:37450..38388(+)	partial			WP_008765275.1	glycosyltransferase family 2 protein	75.3	69.3	30.6
MGA_645	LOCUS_05800	sequence078:3494..4177(-)	frameshift		4197	WP_002225307.1	phosphoserine phosphatase SerB	100.0	81.9	95.2
MGA_651	LOCUS_05860	sequence078:9628..10023(-)	partial			WP_002212573.1	ATP/GTP-binding protein	100.0	73.6	98.5
MGA_662	LOCUS_05970	sequence078:22636..23973(-)	partial			WP_010980797.1	transferrin-binding protein TbpA	100.0	48.6	95.3
MGA_663	LOCUS_05980	sequence078:23970..25382(-)	frameshift		24308	WP_010980797.1	transferrin-binding protein TbpA	76.6	39.3	94.2
MGA_664	LOCUS_05990	sequence078:25469..25900(-)	frameshift		25791	WP_010980796.1	transferrin-binding protein TbpB	79.7	15.6	74.6
MGA_669	LOCUS_06040	sequence078:31444..32469(+)	frameshift		32277	WP_002224939.1	N-acetylmuramoyl-L-alanine amidase	81.8	67.1	91.8
MGA_670	LOCUS_06050	sequence078:32414..32695(+)	frameshift		32277	WP_014580324.1	N-acetylmuramoyl-L-alanine amidase	100.0	22.4	98.9
MGA_674	LOCUS_06090	sequence078:35245..35376(-)	frameshift		35561	WP_003695557.1	holo-ACP synthase	100.0	34.4	88.4
MGA_682	LOCUS_06160	sequence079:2355..2603(+)	frameshift		2320	WP_002225208.1	ribonuclease R	76.8	8.0	46.0
MGA_689	LOCUS_06230	sequence079:9840..9980(-)	frameshift		9988	WP_002242618.1	lipoprotein	95.7	36.7	81.8
MGA_698	LOCUS_06320	sequence079:22774..22956(-)	partial			WP_010951098.1	DEAD/DEAH box helicase family protein	98.3	6.0	57.6
MGA_706	LOCUS_06400	sequence079:29602..30114(+)	frameshift		30108	WP_003688628.1	uracil-DNA glycosylase	99.4	77.2	97.0
MGA_707	LOCUS_06410	sequence079:30442..31110(+)	frameshift		31077	WP_041594898.1	HsdR family type I site-specific deoxyribonuclease	100.0	22.3	48.9
MGA_708	LOCUS_06420	sequence079:31107..31586(+)	frameshift		31080	WP_041594898.1	HsdR family type I site-specific deoxyribonuclease	96.2	14.9	52.9
MGA_709	LOCUS_06430	sequence079:31592..31774(+)	partial			WP_002681373.1	SprT family zinc-dependent metalloprotease	85.0	22.0	68.6
MGA_710	LOCUS_06440	sequence079:31795..32124(-)	partial			WP_009897097.1	DUF3693 domain-containing protein	59.6	58.0	43.1
MGA_715	LOCUS_06490	sequence079:37562..37894(+)	frameshift		37517	WP_002217157.1	hypothetical protein	100.0	76.4	93.6
MGA_717	LOCUS_06510	sequence079:38500..39177(-)	frameshift		39233	WP_002225200.1	endopeptidase La	92.0	25.2	93.2
MGA_718	LOCUS_06520	sequence079:39078..40949(-)	frameshift		39236	WP_002225200.1	endopeptidase La	94.1	72.0	94.1
MGA_736	LOCUS_06700	sequence080:18277..18645(+)	frameshift		18606	WP_002225050.1	IS5 family transposase	89.3	32.5	95.4
MGA_741	LOCUS_06750	sequence080:21000..21419(-)	partial			WP_011704702.1	hypothetical protein	73.4	68.2	35.2
MGA_743	LOCUS_06770	sequence080:22513..22965(+)	partial			WP_015703345.1	EamA family transporter	86.0	44.8	55.8
MGA_744	LOCUS_06780	sequence080:22916..23113(+)	partial			WP_005694002.1	glycogen debranching protein GlgX	50.8	5.0	100.0
MGA_759	LOCUS_06930	sequence080:39593..40999(+)	internal_stop_codon	40997..40999(+)		WP_003698035.1	type IV pilus secretin PilQ	100.0	64.7	93.6
MGA_760	LOCUS_06940	sequence080:41003..41767(+)	internal_stop_codon	40997..40999(+)		WP_002225652.1	type IV pilus secretin PilQ	100.0	32.9	80.7
MGA_827	LOCUS_07580	sequence082:25963..26190(+)	frameshift		26154	WP_002220947.1	GTP cyclohydrolase II	92.0	35.0	87.0
MGA_828	LOCUS_07590	sequence082:26187..26555(+)	frameshift		26154	WP_003689161.1	GTP cyclohydrolase II	100.0	61.9	96.7
MGA_845	LOCUS_07750	sequence083:3417..4337(+)	frameshift		4097	WP_003693510.1	inorganic phosphate transporter	77.5	45.2	88.2
MGA_846	LOCUS_07760	sequence083:4253..4990(+)	frameshift		4097	WP_003693510.1	inorganic phosphate transporter	99.6	46.6	97.5
MGA_862	LOCUS_07920	sequence083:23644..23880(+)	frameshift,internal_stop_codon	23831..23833(+),23843..23845(+)	23814	WP_009346305.1	hypothetical protein	73.1	60.0	96.5
MGA_866	LOCUS_07960	sequence083:26415..28133(-)	frameshift		28314	WP_025456515.1	bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA	100.0	47.6	91.6
MGA_867	LOCUS_07970	sequence083:28105..30021(-)	frameshift		28317	WP_002224912.1	bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA	89.2	47.4	96.8
MGA_881	LOCUS_08100	sequence083:44297..45310(+)	partial			WP_011173347.1	hypothetical protein	51.3	49.7	23.7
MGA_906	LOCUS_08340	sequence084:16355..17854(+)	frameshift		17746	WP_002223856.1	5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase	92.8	61.1	96.1
MGA_907	LOCUS_08350	sequence084:17758..18630(+)	frameshift		17746	WP_002223856.1	5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase	100.0	38.3	98.6
MGA_947	LOCUS_08730	sequence085:11762..12208(-)	frameshift		12210	WP_002225505.1	DUF2059 domain-containing protein	100.0	75.9	96.6
MGA_948	LOCUS_08740	sequence085:12205..12342(-)	frameshift		12210	WP_010357100.1	DUF2059 domain-containing protein	97.8	24.9	84.1
MGA_961	LOCUS_08870	sequence085:25767..26339(+)	frameshift		26315	WP_002219613.1	potassium transporter TrkG	96.3	37.7	91.3
MGA_962	LOCUS_08880	sequence085:26378..27223(+)	frameshift		26315	WP_002219613.1	potassium transporter TrkG	100.0	57.9	95.4
MGA_972	LOCUS_08980	sequence085:35479..36426(+)	frameshift		35534	WP_002219640.1	heme ABC transporter ATP-binding protein FbpC	88.9	79.5	80.7
MGA_980	LOCUS_09060	sequence085:43525..43851(+)	partial			WP_002225532.1	gamma carbonic anhydrase family protein	57.4	35.2	100.0
MGA_981	LOCUS_09070	sequence085:43930..44190(-)	frameshift		44200	WP_002225532.1	gamma carbonic anhydrase family protein	95.3	46.6	96.3
MGA_982	LOCUS_09080	sequence085:44114..44515(-)	frameshift		44200	WP_002225532.1	gamma carbonic anhydrase family protein	66.9	50.6	100.0
MGA_987	LOCUS_09120	sequence086:92..316(-)	frameshift		25,154,43,79	WP_002229113.1	alcohol dehydrogenase AdhP	73.0	15.5	88.9
MGA_1016	LOCUS_09410	sequence086:32356..32988(-)	frameshift		33059	WP_172763941.1	sodium:proton antiporter	100.0	44.4	97.6
MGA_1017	LOCUS_09420	sequence086:33012..33776(-)	frameshift		33059	WP_002222877.1	sodium:proton antiporter	96.1	51.6	92.2
MGA_1039	LOCUS_09640	sequence087:5487..6488(-)	partial			WP_010951228.1	sigma-54-dependent Fis family transcriptional regulator	72.1	41.8	92.9
MGA_1051	LOCUS_09760	sequence087:20507..20971(+)	frameshift		20956	WP_002244239.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	98.1	80.7	96.0
MGA_1080	LOCUS_10050	sequence088:1..991(+)	partial			WP_010951171.1	polymorphic toxin MafB class 3	55.3	38.9	87.9
MGA_1087	LOCUS_10120	sequence088:4224..4586(+)	partial			WP_002225727.1	polymorphic toxin MafB class 3	100.0	24.8	98.3
MGA_1091	LOCUS_10160	sequence088:5598..5810(+)	frameshift		5795	WP_002215099.1	immunity 8 family protein	94.3	55.5	100.0
MGA_1107	LOCUS_10320	sequence088:21313..22128(+)	frameshift		22059	WP_010951342.1	glycosyltransferase family 4 protein	91.5	66.0	97.6
MGA_1108	LOCUS_10330	sequence088:22062..22442(+)	frameshift		22059	WP_002221887.1	glycosyltransferase family 4 protein	100.0	33.5	97.6
MGA_1119	LOCUS_10440	sequence088:37672..38070(-)	partial			WP_011964246.1	type II restriction endonuclease	100.0	44.3	48.5
MGA_1134	LOCUS_10590	sequence088:51842..53854(+)	frameshift		53584,53888,53855,53575	WP_003690003.1	Rne/Rng family ribonuclease	85.5	62.6	97.7
MGA_1135	LOCUS_10600	sequence088:53874..54626(+)	partial			WP_010980758.1	Rne/Rng family ribonuclease	71.2	19.4	91.6
MGA_1141	LOCUS_10660	sequence089:8443..8871(+)	partial			WP_011071245.1	fumarate reductase flavoprotein subunit FccA	48.6	12.8	43.4
MGA_1142	LOCUS_10670	sequence089:8835..9971(+)	frameshift		8820	WP_048061070.1	fumarate reductase subunit A	84.9	56.7	38.2
MGA_1143	LOCUS_10680	sequence089:9968..11221(+)	partial			WP_012868905.1	NADH-quinone oxidoreductase subunit NuoF	89.4	62.2	41.0
MGA_1146	LOCUS_10710	sequence089:15155..16966(-)	partial			WP_010951204.1	hypothetical protein	62.7	81.8	35.3
MGA_1157	LOCUS_10820	sequence089:29803..29982(-)	frameshift		29805	WP_002216735.1	phosphoethanolamine--lipid A transferase	100.0	10.8	98.3
MGA_1161	LOCUS_10860	sequence089:33812..36154(+)	frameshift		35977	WP_002225000.1	translation initiation factor IF-2	92.3	74.8	80.6
MGA_1162	LOCUS_10870	sequence089:36058..36699(+)	frameshift		35977	WP_010951232.1	translation initiation factor IF-2	100.0	22.6	97.2
MGA_1167	LOCUS_10920	sequence089:43570..44469(-)	partial			WP_003846917.1	lactose permease	96.3	69.1	56.9
MGA_1175	LOCUS_11000	sequence089:52753..52893(-)	frameshift		52898	WP_002218494.1	ACT domain-containing protein	100.0	51.1	97.8
MGA_1176	LOCUS_11010	sequence089:52890..53024(-)	frameshift		52898	WP_002218494.1	ACT domain-containing protein	95.5	46.7	100.0
MGA_1181	LOCUS_11040	sequence090:206..703(-)	frameshift		244	WP_002225050.1	IS5 family transposase	60.6	28.4	85.0
MGA_1185	LOCUS_11080	sequence090:4525..5901(-)	frameshift		6029	WP_011260991.1	alkaline phosphatase family protein	90.2	61.9	34.7
MGA_1186	LOCUS_11090	sequence090:5850..6527(-)	frameshift		6029	WP_011260991.1	alkaline phosphatase family protein	62.2	21.9	32.6
MGA_1194	LOCUS_11170	sequence090:16947..20036(+)	partial			WP_003112989.1	TonB-dependent siderophore receptor	30.0	36.5	36.3
MGA_1198	LOCUS_11210	sequence090:24514..25104(+)	frameshift		25065	WP_002213013.1	recombinase RecA	93.9	52.9	94.6
MGA_1199	LOCUS_11220	sequence090:25101..25559(+)	frameshift		25062	WP_003688695.1	recombinase RecA	100.0	43.7	98.0
MGA_1200	LOCUS_11230	sequence090:26536..30231(-)	frameshift		30262,30268,30271	WP_010869283.1	YadA family autotransporter adhesin	44.7	52.6	63.3
MGA_1209	LOCUS_11320	sequence090:45005..45448(-)	partial			WP_011183205.1	DNA (cytosine-5-)-methyltransferase	93.2	32.7	40.1
MGA_1220	LOCUS_11430	sequence090:55722..55865(+)	partial			WP_010951147.1	hypothetical protein	70.2	76.7	84.8
MGA_1224	LOCUS_11460	sequence091:24..1025(-)	partial			WP_010951171.1	polymorphic toxin MafB class 3	100.0	71.2	91.9
MGA_1226	LOCUS_11480	sequence091:2282..2518(-)	partial			WP_002225342.1	IS5 family transposase	100.0	23.2	60.0
MGA_1237	LOCUS_11590	sequence091:11298..11684(-)	frameshift		11381	WP_003696353.1	hypothetical protein	81.2	49.5	74.8
MGA_1280	LOCUS_12020	sequence091:51646..52224(+)	frameshift		52352,52044	WP_002225695.1	DNA recombination protein RmuC	69.3	22.4	85.7
MGA_1281	LOCUS_12030	sequence091:52149..53438(+)	frameshift		52044	WP_010356003.1	DNA recombination protein RmuC	100.0	72.0	96.3
MGA_1290	LOCUS_12120	sequence091:61180..62358(+)	frameshift		61959	WP_002244346.1	phosphomethylpyrimidine synthase ThiC	66.6	41.2	98.1
MGA_1291	LOCUS_12130	sequence091:62273..63082(+)	partial			WP_002244346.1	phosphomethylpyrimidine synthase ThiC	100.0	42.5	98.5
MGA_1294	LOCUS_12150	sequence092:719..973(+)	frameshift		623	WP_010951219.1	diacylglycerol kinase	100.0	66.1	95.2
MGA_1299	LOCUS_12200	sequence092:6604..7158(+)	internal_stop_codon	7156..7158(+)		WP_011388583.1	CRISPR-associated helicase/endonuclease Cas3	38.6	9.4	64.8
MGA_1306	LOCUS_12270	sequence092:16152..17447(-)	frameshift		16171,17533	WP_003698307.1	DNA primase	99.1	72.4	97.0
MGA_1307	LOCUS_12280	sequence092:17474..17869(-)	frameshift		17533	WP_002225052.1	DNA primase	83.2	18.5	99.1
MGA_1315	LOCUS_12360	sequence092:25079..25549(+)	internal_stop_codon	25547..25549(+)		WP_003691028.1	helix-turn-helix domain-containing protein	100.0	57.6	95.5
MGA_1316	LOCUS_12370	sequence092:25574..25894(+)	internal_stop_codon	25547..25549(+)		WP_003691028.1	helix-turn-helix domain-containing protein	100.0	39.1	96.2
MGA_1317	LOCUS_12380	sequence092:25872..26429(-)	partial			WP_002259958.1	YbhB/YbcL family Raf kinase inhibitor-like protein	54.1	57.5	94.0
MGA_1352	LOCUS_12730	sequence092:63757..64122(-)	partial			WP_002222084.1	contact-dependent growth inhibition system immunity protein	100.0	73.8	98.3
MGA_1354	LOCUS_12750	sequence092:64666..64992(+)	frameshift		65013,65037,64989	WP_012503932.1	replication initiation factor domain-containing protein	75.9	17.9	68.7
MGA_1355	LOCUS_12760	sequence093:596..2425(-)	frameshift		2427	WP_002219226.1	heavy metal translocating P-type ATPase	100.0	73.6	89.8
MGA_1356	LOCUS_12770	sequence093:2425..3075(-)	frameshift		2430	WP_002219226.1	heavy metal translocating P-type ATPase	100.0	26.2	97.2
MGA_1357	LOCUS_12780	sequence093:3072..3902(-)	frameshift		3915	WP_002219225.1	GTPase HflX	99.3	69.9	85.0
MGA_1366	LOCUS_12870	sequence093:11839..12762(+)	partial			WP_003688809.1	DNA cytosine methyltransferase	100.0	72.6	97.1
MGA_1391	LOCUS_13120	sequence093:42058..42369(+)	frameshift		42345	WP_002225180.1	SGNH/GDSL hydrolase family protein	94.2	24.4	96.9
MGA_1392	LOCUS_13130	sequence093:42405..43247(+)	frameshift		42348	WP_002225180.1	SGNH/GDSL hydrolase family protein	100.0	70.5	95.4
MGA_1397	LOCUS_13180	sequence093:50880..51650(-)	frameshift		51774	WP_002222388.1	acyl-CoA dehydrogenase family protein	100.0	53.9	94.5
MGA_1398	LOCUS_13190	sequence093:51658..52308(-)	frameshift		51777	WP_010357927.1	acyl-CoA dehydrogenase family protein	82.4	37.5	98.9
MGA_1400	LOCUS_13210	sequence093:52838..53884(+)	partial			WP_011267855.1	FxsB family radical SAM/SPASM domain protein	100.0	47.6	31.5
MGA_1417	LOCUS_13380	sequence093:73721..73900(+)	frameshift		73599	WP_003688930.1	16S rRNA pseudouridine(516) synthase	100.0	25.7	91.5
MGA_1420	LOCUS_13410	sequence093:76868..77848(+)	frameshift		77725,77734	WP_002237993.1	30S ribosomal protein S1	87.7	51.0	97.6
MGA_1421	LOCUS_13420	sequence093:77778..78554(+)	frameshift		77725,77734	WP_003691321.1	30S ribosomal protein S1	100.0	46.0	93.8
MGA_1426	LOCUS_13460	sequence094:2785..3522(+)	frameshift		2716	WP_010950979.1	50S ribosomal protein L11 methyltransferase	100.0	83.1	94.3
MGA_1456	LOCUS_13760	sequence094:32054..32320(-)	frameshift		32301	WP_149449332.1	IS5 family transposase	61.4	14.6	94.4
MGA_1457	LOCUS_13770	sequence094:32263..32631(-)	frameshift		32301	WP_002225050.1	IS5 family transposase	89.3	32.5	95.4
MGA_1458	LOCUS_13780	sequence094:32805..34391(-)	partial			WP_004186417.1	DNA translocase FtsK	43.0	14.4	36.0
MGA_1460	LOCUS_13800	sequence094:34928..36463(-)	partial			WP_005109923.1	DNA sulfur modification protein DndD	39.3	27.5	31.8
MGA_1462	LOCUS_13820	sequence094:36641..37399(-)	frameshift		37445	WP_005109921.1	DNA phosphorothioation system sulfurtransferase DndC	90.9	46.5	41.3
MGA_1467	LOCUS_13870	sequence094:42052..42186(+)	partial			WP_002214728.1	50S ribosomal protein L34	54.5	54.5	100.0
MGA_1478	LOCUS_13980	sequence094:49443..49634(+)	partial			WP_003689511.1	hypothetical protein	100.0	45.7	66.7
MGA_1491	LOCUS_14110	sequence094:62060..62719(-)	frameshift		62823	WP_032826364.1	glycosyltransferase family 8 protein	99.1	70.1	36.2
MGA_1494	LOCUS_14140	sequence094:63872..64546(-)	frameshift		64605	WP_002257440.1	glycosyltransferase family 2 protein	100.0	64.2	97.8
MGA_1501	LOCUS_14210	sequence094:72694..73143(-)	frameshift		73160	WP_002225831.1	F0F1 ATP synthase subunit delta	100.0	84.2	63.1
MGA_1563	LOCUS_14820	sequence095:56447..56857(+)	partial			WP_003780110.1	YadA-like family protein	88.2	14.5	43.4
MGA_1572	LOCUS_14910	sequence095:69777..69962(-)	partial			WP_002225296.1	IS5 family transposase	93.4	15.4	94.7
MGA_1610	LOCUS_15290	sequence096:27253..27408(-)	partial			WP_003687674.1	ferrochelatase	96.1	13.6	71.4
MGA_1611	LOCUS_15300	sequence096:27535..28317(-)	frameshift		28309	WP_010359848.1	ferrochelatase	98.8	76.5	85.2
MGA_1647	LOCUS_15650	sequence096:59615..59872(+)	partial			WP_010951171.1	polymorphic toxin MafB class 3	65.9	12.0	85.7
MGA_1649	LOCUS_15670	sequence096:60341..60496(+)	partial			WP_003688150.1	hypothetical protein	84.3	58.0	58.1
MGA_1668	LOCUS_15860	sequence096:78890..79348(+)	partial			WP_000826425.1	RNA-guided endonuclease TnpB family protein	94.1	35.8	56.6
MGA_1669	LOCUS_15870	sequence096:79977..80264(+)	frameshift		80234,80294,80222	WP_002247616.1	hemagglutinin repeat-containing protein	86.3	3.5	72.4
MGA_1678	LOCUS_15950	sequence097:6693..10001(+)	partial			WP_013529839.1	YadA-like family protein	78.3	51.5	27.3
MGA_1679	LOCUS_15960	sequence097:9983..17674(+)	partial			WP_002222588.1	autotransporter adhesin NhhA	8.3	36.2	94.4
MGA_1691	LOCUS_16080	sequence097:29939..32044(-)	partial			WP_010951099.1	DNA methyltransferase	54.2	54.2	71.0
MGA_1709	LOCUS_16260	sequence097:49545..49832(-)	partial			WP_005068595.1	type II toxin-antitoxin system RelB/DinJ family antitoxin	49.5	46.1	44.7
MGA_1711	LOCUS_16280	sequence097:51358..54462(-)	partial			WP_000258489.1	hypothetical protein	48.5	61.9	30.6
MGA_1723	LOCUS_16400	sequence097:67069..67749(-)	frameshift		67886	WP_002225149.1	VirK/YbjX family protein	100.0	72.9	95.6
MGA_1739	LOCUS_16560	sequence098:537..1058(-)	frameshift		1194	WP_114935287.1	hypothetical protein	41.0	4.1	76.1
MGA_1740	LOCUS_16570	sequence098:994..7047(-)	frameshift		1194	WP_114935287.1	hypothetical protein	44.7	52.0	83.0
MGA_1749	LOCUS_16660	sequence098:17682..18323(+)	frameshift		18209	WP_002225214.1	assimilatory sulfite reductase (NADPH) hemoprotein subunit	83.6	30.2	97.2
MGA_1750	LOCUS_16670	sequence098:18263..19300(+)	frameshift		18209,19250	WP_002225214.1	assimilatory sulfite reductase (NADPH) hemoprotein subunit	97.1	56.9	95.2
MGA_1757	LOCUS_16740	sequence098:26671..27207(-)	frameshift		27224	WP_002222468.1	RNA methyltransferase	100.0	68.2	92.7
MGA_1758	LOCUS_16750	sequence098:27204..27455(-)	frameshift		27224	WP_002222468.1	RNA methyltransferase	92.8	29.5	90.9
MGA_1792	LOCUS_17090	sequence098:59717..59881(+)	frameshift		59866	WP_002225265.1	glycerol-3-phosphate 1-O-acyltransferase PlsY	94.4	25.5	98.0
MGA_1793	LOCUS_17100	sequence098:59887..60318(+)	frameshift		59866	WP_002225265.1	glycerol-3-phosphate 1-O-acyltransferase PlsY	100.0	71.5	78.3
MGA_1816	LOCUS_17330	sequence098:86996..87232(-)	frameshift		87234,87012	WP_002224037.1	toxin-activating lysine-acyltransferase	93.6	48.0	93.2
MGA_1817	LOCUS_17340	sequence098:87232..87369(-)	frameshift		87234,87012	WP_002224037.1	toxin-activating lysine-acyltransferase	97.8	28.9	95.5
MGA_1819	LOCUS_17360	sequence098:88194..89276(-)	frameshift		89529,89403	WP_002247616.1	hemagglutinin repeat-containing protein	19.4	2.8	70.0
MGA_1830	LOCUS_17460	sequence099:8498..8869(-)	frameshift		8940	WP_002221185.1	aminoacyl-tRNA hydrolase	100.0	64.1	96.7
MGA_1842	LOCUS_17580	sequence099:19111..19518(-)	frameshift		19185	WP_002217565.1	SCP2 domain-containing protein	82.2	59.0	89.2
MGA_1848	LOCUS_17640	sequence099:25249..26022(+)	frameshift		25893	WP_002222698.1	adenylosuccinate synthase	84.8	50.5	95.4
MGA_1849	LOCUS_17650	sequence099:25941..26552(+)	frameshift		25893	WP_002222698.1	adenylosuccinate synthase	100.0	47.0	91.6
MGA_1875	LOCUS_17910	sequence099:51592..51987(-)	partial			WP_002244512.1	hypothetical protein	61.8	51.0	72.8
MGA_1915	LOCUS_18310	sequence100:149..448(+)	frameshift		88,97,55	WP_010981060.1	ComEA family DNA-binding protein	82.8	53.2	95.1
MGA_1922	LOCUS_18380	sequence100:7830..9203(+)	internal_stop_codon	9201..9203(+)		WP_002224749.1	Tex family protein	100.0	60.4	94.1
MGA_1923	LOCUS_18390	sequence100:9252..10103(+)	internal_stop_codon	9201..9203(+)		WP_003690166.1	Tex family protein	100.0	37.4	97.5
MGA_1949	LOCUS_18650	sequence100:36274..36522(-)	frameshift		36518	WP_002215355.1	hypothetical protein	98.8	44.3	90.1
MGA_1953	LOCUS_18690	sequence100:38764..39444(+)	frameshift		39387,39519	WP_002215366.1	elongation factor Tu	92.0	52.8	94.7
MGA_1954	LOCUS_18700	sequence100:39544..39948(+)	frameshift		39522,39387	WP_002221846.1	elongation factor Tu	100.0	34.0	99.3
MGA_1958	LOCUS_18740	sequence100:41642..42325(+)	partial			WP_000858600.1	GTPase family protein	89.9	64.3	38.1
MGA_1992	LOCUS_19080	sequence100:60528..60806(+)	partial			WP_003705520.1	pertactin-like passenger domain-containing protein	100.0	32.7	48.4
MGA_1993	LOCUS_19090	sequence100:60787..61017(+)	partial			WP_003689755.1	autotransporter outer membrane beta-barrel domain-containing protein	92.1	46.1	50.0
MGA_1996	LOCUS_19120	sequence100:64699..66270(-)	partial			WP_014640171.1	protein kinase YegI	57.6	46.7	26.4
MGA_2019	LOCUS_19350	sequence100:84920..86830(+)	partial			WP_011104542.1	VapE family protein	56.3	43.8	27.9
MGA_2086	LOCUS_20020	sequence101:55472..56944(+)	frameshift		56878	WP_046463873.1	membrane protein	96.7	61.0	30.4
MGA_2087	LOCUS_20030	sequence101:57028..57816(+)	frameshift		56905	WP_046237739.1	membrane protein	88.5	30.0	36.0
MGA_2092	LOCUS_20080	sequence101:61965..63083(+)	frameshift		63077	WP_002224972.1	sodium-dependent transporter	100.0	83.6	96.5
MGA_2093	LOCUS_20090	sequence101:63085..63303(+)	frameshift		63077	WP_003695694.1	sodium-dependent transporter	100.0	16.2	97.2
MGA_2099	LOCUS_20150	sequence101:70019..72175(+)	partial			WP_003119294.1	TonB-dependent copper receptor	64.3	67.9	38.3
MGA_2122	LOCUS_20380	sequence101:100684..101259(-)	partial			WP_002244044.1	polymorphic toxin MafB class 2	49.7	15.3	71.6
MGA_2124	LOCUS_20400	sequence101:101787..102455(-)	partial			WP_010951299.1	polymorphic toxin MafB class 1	81.1	31.2	69.6
MGA_2127	LOCUS_20430	sequence101:103610..103987(-)	partial			WP_003749677.1	HINT domain-containing protein	100.0	59.8	96.0
