{
    "type": "genome",
    "identifier": "GCF_000174035.1",
    "organism": "Mycobacterium avium subsp. avium ATCC 25291",
    "title": "Mycobacterium avium subsp. avium ATCC 25291",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "McGill University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_000174035.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN02470543",
        "wgs_master": "ACFI00000000.1",
        "refseq_category": "na",
        "taxid": "553481",
        "species_taxid": "1764",
        "organism_name": "Mycobacterium avium subsp. avium ATCC 25291",
        "infraspecific_name": "strain=ATCC 25291",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2009/01/27",
        "asm_name": "ASM17403v1",
        "asm_submitter": "McGill University",
        "gbrs_paired_asm": "GCA_000174035.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/174/035/GCF_000174035.1_ASM17403v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "4857995",
        "genome_size_ungapped": "4857995",
        "gc_percent": "69.000000",
        "replicon_count": "0",
        "scaffold_count": "258",
        "contig_count": "258",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_000174035.1-RS_2024_05_15",
        "annotation_date": "2024-05-15",
        "total_gene_count": "4745",
        "protein_coding_gene_count": "4405",
        "non_coding_gene_count": "53",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2009-01-27",
    "dateModified": "2009-01-27",
    "datePublished": "2009-01-27",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Mycobacterium avium subsp. avium ATCC 25291"
        ],
        "sample_taxid": [
            "553481"
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        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [],
        "sample_host_location_id": [],
        "data_size": "1.323 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.83,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
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    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "4857251",
        "Number of Sequences": "253",
        "Longest Sequences (bp)": "232624",
        "N50 (bp)": "45689",
        "Gap Ratio (%)": "0.000288",
        "GCcontent (%)": "69.2",
        "Number of CDSs": "4452",
        "Average Protein Length": "314.2",
        "Coding Ratio (%)": "86.4",
        "Number of rRNAs": "3",
        "Number of tRNAs": "56",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
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        "tRNA_genes": 46.316,
        "gram_stain": 1.0,
        "sporulation": 0.0,
        "motility": 0.0,
        "range_salinity": 1.0,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 0.0,
        "aerobic_respiration": 1.0,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_genome_taxon": [
        "Mycobacterium",
        "avium",
        "subsp.",
        "avium",
        "ATCC",
        "25291"
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}