{ "type": "genome", "identifier": "GCF_000175195.1", "organism": "Actinobacillus minor NM305", "title": "Actinobacillus minor NM305", "description": "na", "data type": "Genome sequencing and assembly", "organization": "McGill University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000175195.1", "bioproject": "PRJNA224116", "biosample": "SAMN02470284", "wgs_master": "ACQL00000000.1", "refseq_category": "reference genome", "taxid": "637911", "species_taxid": "51047", "organism_name": "Actinobacillus minor NM305", "infraspecific_name": "strain=NM305", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2009/06/19", "asm_name": "ASM17519v1", "asm_submitter": "McGill University", "gbrs_paired_asm": "GCA_000175195.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/175/195/GCF_000175195.1_ASM17519v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "2425264", "genome_size_ungapped": "2425264", "gc_percent": "39.500000", "replicon_count": "0", "scaffold_count": "197", "contig_count": "197", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_000175195.1-RS_2024_03_20", "annotation_date": "2024-03-20", "total_gene_count": "2394", "protein_coding_gene_count": "2275", "non_coding_gene_count": "56", "pubmed_id": "19819087" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2009-06-19", "dateModified": "2009-06-19", "datePublished": "2009-06-19", "_annotation": { "sample_count": 1, "sample_organism": [ "Actinobacillus minor NM305" ], "sample_taxid": [ "637911" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [], "sample_host_location_id": [], "data_size": "0.689 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "2418929", "Number of Sequences": "148", "Longest Sequences (bp)": "152035", "N50 (bp)": "67819", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "39.3", "Number of CDSs": "2255", "Average Protein Length": "306.9", "Coding Ratio (%)": "85.8", "Number of rRNAs": "0", "Number of tRNAs": "45", "Number of CRISPRs": "3" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Actinobacillus minor", "strain": "strain=NM305", "accession": "GCA_000175195.1", "taxid": 51047, "species_taxid": 51047, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 747, "total_fragments": 752, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Haemophilus paraphrohaemolyticus", "strain": "strain=CCUG 3718", "accession": "GCA_002015045.1", "taxid": 736, "species_taxid": 736, "relation_to_type": "type", "validated": true, "ani": 79.7501, "matched_fragments": 290, "total_fragments": 752, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Haemophilus parahaemolyticus", "strain": "strain=CCUG 3716", "accession": "GCA_002015035.1", "taxid": 735, "species_taxid": 735, "relation_to_type": "type", "validated": true, "ani": 79.7263, "matched_fragments": 291, "total_fragments": 752, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Haemophilus parahaemolyticus", "strain": "strain=FDAARGOS_1199", "accession": "GCA_016889385.1", "taxid": 735, "species_taxid": 735, "relation_to_type": "type", "validated": true, "ani": 79.7212, "matched_fragments": 290, "total_fragments": 752, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Haemophilus 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