{ "tc_result": [ { "organism_name": "Corynebacterium matruchotii", "strain": "strain=ATCC 14266", "accession": "GCA_000175375.1", "taxid": 43768, "species_taxid": 43768, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 949, "total_fragments": 949, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Corynebacterium matruchotii", "strain": "strain=ATCC 14266", "accession": "GCA_011612265.2", "taxid": 43768, "species_taxid": 43768, "relation_to_type": "type", "validated": true, "ani": 99.9895, "matched_fragments": 947, "total_fragments": 949, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Corynebacterium matruchotii", "strain": "strain=NCTC10254", "accession": "GCA_900447555.1", "taxid": 43768, "species_taxid": 43768, "relation_to_type": "type", "validated": true, "ani": 99.9603, "matched_fragments": 925, "total_fragments": 949, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Corynebacterium rouxii", "strain": "strain=FRC0190", "accession": "GCA_902702935.1", "taxid": 2719119, "species_taxid": 2719119, "relation_to_type": "type", "validated": true, "ani": 77.8751, "matched_fragments": 61, "total_fragments": 949, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium aquilae", "strain": "strain=S-613", "accession": "GCA_001941445.1", "taxid": 203263, "species_taxid": 203263, "relation_to_type": "type", "validated": true, "ani": 77.8218, "matched_fragments": 118, "total_fragments": 949, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium pseudopelargi", "strain": "strain=812CH", "accession": "GCA_003814005.1", "taxid": 2080757, "species_taxid": 2080757, "relation_to_type": "type", "validated": true, "ani": 77.7999, "matched_fragments": 84, "total_fragments": 949, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium diphtheriae", "strain": "strain=DSM 44123", "accession": "GCA_001913265.1", "taxid": 1717, "species_taxid": 1717, "relation_to_type": "type", "validated": true, "ani": 77.7499, "matched_fragments": 64, "total_fragments": 949, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium vitaeruminis", "strain": "strain=DSM 20294", "accession": "GCA_000550805.1", "taxid": 38305, "species_taxid": 38305, "relation_to_type": "type", "validated": true, "ani": 77.56, "matched_fragments": 138, "total_fragments": 949, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium pollutisoli", "strain": "strain=VDS11", "accession": "GCA_900177745.1", "taxid": 1610489, "species_taxid": 1610489, "relation_to_type": "type", "validated": true, "ani": 77.339, "matched_fragments": 114, "total_fragments": 949, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium occultum", "strain": "strain=2039", "accession": "GCA_009734425.1", "taxid": 2675219, "species_taxid": 2675219, "relation_to_type": "type", "validated": true, "ani": 77.1815, "matched_fragments": 88, "total_fragments": 949, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium alimapuense", "strain": "strain=VA37-3", "accession": "GCA_003716585.1", "taxid": 1576874, "species_taxid": 1576874, "relation_to_type": "type", "validated": true, "ani": 76.9097, "matched_fragments": 55, "total_fragments": 949, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium stationis", "strain": "strain=622=DSM 20302", "accession": "GCA_001941345.1", "taxid": 1705, "species_taxid": 1705, "relation_to_type": "type", "validated": true, "ani": 76.6452, "matched_fragments": 50, "total_fragments": 949, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 99.54, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_011612265.2", "gtdb_species": "s__Corynebacterium matruchotii", "ani": 99.9895, "matched_fragments": 947, "total_fragments": 949, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.54", "min_intra_species_ani": "97.18", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.91", "num_clustered_genomes": 9, "status": "conclusive" }, { "accession": "GCF_902702935.1", "gtdb_species": "s__Corynebacterium rouxii", "ani": 77.8751, "matched_fragments": 61, "total_fragments": 949, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001941445.1", "gtdb_species": "s__Corynebacterium aquilae", "ani": 77.8218, "matched_fragments": 118, "total_fragments": 949, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003814005.1", "gtdb_species": "s__Corynebacterium pseudopelargi", "ani": 77.7742, "matched_fragments": 86, "total_fragments": 949, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000550805.1", "gtdb_species": "s__Corynebacterium vitaeruminis", "ani": 77.56, "matched_fragments": 138, "total_fragments": 949, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.86", "min_intra_species_ani": "98.60", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.94", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_001457455.1", "gtdb_species": "s__Corynebacterium diphtheriae", "ani": 77.5151, "matched_fragments": 70, "total_fragments": 949, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.05", "min_intra_species_ani": "95.03", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.83", "num_clustered_genomes": 346, "status": "-" }, { "accession": "GCF_004114895.1", "gtdb_species": "s__Corynebacterium pelargi", "ani": 77.35, "matched_fragments": 95, "total_fragments": 949, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_900177745.1", "gtdb_species": "s__Corynebacterium pollutisoli", "ani": 77.339, "matched_fragments": 114, "total_fragments": 949, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.83", "min_intra_species_ani": "98.83", "mean_intra_species_af": "0.98", "min_intra_species_af": "0.98", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000767055.1", "gtdb_species": "s__Corynebacterium doosanense", "ani": 77.25, "matched_fragments": 83, "total_fragments": 949, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_009734425.1", "gtdb_species": "s__Corynebacterium sp009734425", "ani": 77.1815, "matched_fragments": 88, "total_fragments": 949, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001412105.1", "gtdb_species": "s__Corynebacterium oculi", "ani": 76.9164, "matched_fragments": 91, "total_fragments": 949, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003716585.1", "gtdb_species": "s__Corynebacterium alimapuense", "ani": 76.9097, "matched_fragments": 55, "total_fragments": 949, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001941485.1", "gtdb_species": "s__Corynebacterium frankenforstense", "ani": 76.8957, "matched_fragments": 100, "total_fragments": 949, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003955685.1", "gtdb_species": "s__Corynebacterium sp003955685", "ani": 76.8587, "matched_fragments": 97, "total_fragments": 949, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900176155.1", "gtdb_species": "s__Corynebacterium glucuronolyticum", "ani": 76.6634, "matched_fragments": 55, "total_fragments": 949, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.97", "min_intra_species_ani": "98.66", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.91", "num_clustered_genomes": 8, "status": "-" }, { "accession": "GCF_001941345.1", "gtdb_species": "s__Corynebacterium stationis", "ani": 76.6452, "matched_fragments": 50, "total_fragments": 949, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.83", "min_intra_species_ani": "97.14", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.87", "num_clustered_genomes": 11, "status": "-" } ] }