{
    "type": "genome",
    "identifier": "GCF_000175595.1",
    "organism": "Clostridium carboxidivorans P7",
    "title": "Clostridium carboxidivorans P7",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "US DOE Joint Genome Institute (JGI-PGF)",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_000175595.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN02441784",
        "wgs_master": "ACVI00000000.1",
        "refseq_category": "na",
        "taxid": "536227",
        "species_taxid": "217159",
        "organism_name": "Clostridium carboxidivorans P7",
        "infraspecific_name": "strain=P7",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2009/08/05",
        "asm_name": "ASM17559v1",
        "asm_submitter": "US DOE Joint Genome Institute (JGI-PGF)",
        "gbrs_paired_asm": "GCA_000175595.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/175/595/GCF_000175595.1_ASM17559v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "5592854",
        "genome_size_ungapped": "5592854",
        "gc_percent": "29.500000",
        "replicon_count": "0",
        "scaffold_count": "252",
        "contig_count": "252",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_000175595.1-RS_2024_04_10",
        "annotation_date": "2024-04-10",
        "total_gene_count": "5387",
        "protein_coding_gene_count": "5090",
        "non_coding_gene_count": "69",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2009-08-05",
    "dateModified": "2009-08-05",
    "datePublished": "2009-08-05",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Clostridium carboxidivorans P7"
        ],
        "sample_taxid": [
            "536227"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [
            "None"
        ],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA"
        ],
        "sample_host_location_id": [],
        "data_size": "1.536 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.83,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "5592854",
        "Number of Sequences": "252",
        "Longest Sequences (bp)": "155121",
        "N50 (bp)": "41085",
        "Gap Ratio (%)": "0.000143",
        "GCcontent (%)": "29.7",
        "Number of CDSs": "5345",
        "Average Protein Length": "289.9",
        "Coding Ratio (%)": "83.1",
        "Number of rRNAs": "3",
        "Number of tRNAs": "56",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Clostridium carboxidivorans",
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                "species_taxid": 217159,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 1719,
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                "ani_threshold": 95,
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            },
            {
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                "relation_to_type": "type",
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            },
            {
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            {
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                "ani_threshold": 95,
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            },
            {
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Clostridium muellerianum",
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                "taxid": 2716538,
                "species_taxid": 2716538,
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Clostridium thailandense",
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                "accession": "GCA_019207025.1",
                "taxid": 2794346,
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Clostridium autoethanogenum",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Clostridium kluyveri",
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                "ani": 77.401,
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            {
                "organism_name": "Clostridium kluyveri",
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Clostridium faecium",
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                "accession": "GCA_014836835.1",
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            },
            {
                "organism_name": "Clostridium cibarium",
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                "matched_fragments": 159,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Clostridium swellfunianum",
                "strain": "strain=CICC 10730",
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    },
    "_bac2feature": {
        "phenotypes": null,
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    "_genome_taxon": [
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        "P7"
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    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}