{ "type": "genome", "identifier": "GCF_000176175.1", "organism": "Vibrio furnissii CIP 102972", "title": "Vibrio furnissii CIP 102972", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR)", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000176175.1", "bioproject": "PRJNA224116", "biosample": "SAMN02393822", "wgs_master": "ACZP00000000.1", "refseq_category": "na", "taxid": "675811", "species_taxid": "29494", "organism_name": "Vibrio furnissii CIP 102972", "infraspecific_name": "strain=CIP 102972", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2009/10/06", "asm_name": "ASM17617v1", "asm_submitter": "Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR)", "gbrs_paired_asm": "GCA_000176175.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/176/175/GCF_000176175.1_ASM17617v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4958664", "genome_size_ungapped": "4958664", "gc_percent": "50.500000", "replicon_count": "0", "scaffold_count": "24", "contig_count": "24", "annotation_provider": "NCBI RefSeq", "annotation_name": "NCBI Prokaryotic Genome Annotation Pipeline (PGAP)", "annotation_date": "2024-02-16", "total_gene_count": "4628", "protein_coding_gene_count": "4435", "non_coding_gene_count": "137", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2009-10-06", "dateModified": "2009-10-06", "datePublished": "2009-10-06", "_annotation": { "sample_count": 1, "sample_organism": [ "Vibrio furnissii CIP 102972" ], "sample_taxid": [ "675811" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [], "sample_host_location_id": [], "data_size": "1.408 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 95.83, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "4958664", "Number of Sequences": "24", "Longest Sequences (bp)": "1641560", "N50 (bp)": "1355700", "Gap Ratio (%)": "0.000141", "GCcontent (%)": "50.6", "Number of CDSs": "4504", "Average Protein Length": "319.2", "Coding Ratio (%)": "87.0", "Number of rRNAs": "19", "Number of tRNAs": "103", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Vibrio furnissii", "strain": "strain=CIP 102972", "accession": "GCA_000176175.1", "taxid": 29494, "species_taxid": 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