{
    "type": "genome",
    "identifier": "GCF_000176515.1",
    "organism": "Grimontia hollisae CIP 101886",
    "title": "Grimontia hollisae CIP 101886",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR)",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_000176515.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN02393821",
        "wgs_master": "ADAQ00000000.1",
        "refseq_category": "na",
        "taxid": "675812",
        "species_taxid": "673",
        "organism_name": "Grimontia hollisae CIP 101886",
        "infraspecific_name": "strain=CIP 101886",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2009/10/29",
        "asm_name": "ASM17651v1",
        "asm_submitter": "Los Alamos National Laboratory (LANL), National Microbial Pathogen Data Resource (NMPDR)",
        "gbrs_paired_asm": "GCA_000176515.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/176/515/GCF_000176515.1_ASM17651v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "4002786",
        "genome_size_ungapped": "4002786",
        "gc_percent": "49.500000",
        "replicon_count": "0",
        "scaffold_count": "13",
        "contig_count": "13",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_000176515.1-RS_2024_07_29",
        "annotation_date": "2024-07-29",
        "total_gene_count": "3681",
        "protein_coding_gene_count": "3506",
        "non_coding_gene_count": "136",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2009-10-29",
    "dateModified": "2009-10-29",
    "datePublished": "2009-10-29",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Grimontia hollisae CIP 101886"
        ],
        "sample_taxid": [
            "675812"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [],
        "sample_host_location_id": [],
        "data_size": "1.139 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "4002786",
        "Number of Sequences": "13",
        "Longest Sequences (bp)": "1210168",
        "N50 (bp)": "1078387",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "49.5",
        "Number of CDSs": "3552",
        "Average Protein Length": "325.2",
        "Coding Ratio (%)": "86.6",
        "Number of rRNAs": "19",
        "Number of tRNAs": "97",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Grimontia hollisae",
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                "relation_to_type": "type",
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            {
                "organism_name": "Grimontia sedimenti",
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                "species_taxid": 2711294,
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                "status": "below_threshold"
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                "organism_name": "Grimontia celer",
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                "status": "below_threshold"
            },
            {
                "organism_name": "Grimontia marina",
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                "taxid": 646534,
                "species_taxid": 646534,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Vibrio stylophorae",
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                "accession": "GCA_921293875.1",
                "taxid": 659351,
                "species_taxid": 659351,
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                "matched_fragments": 127,
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Vibrio furnissii",
                "strain": "strain=PartQ-Vfurnissii-RM8376",
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                "species_taxid": 29494,
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                "status": "below_threshold"
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            {
                "organism_name": "Photobacterium swingsii",
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                "accession": "GCA_024346715.1",
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                "species_taxid": 680026,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Vibrio albus",
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                "ani_threshold": 95,
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            {
                "organism_name": "Photobacterium galatheae",
                "strain": "strain=DSM 100496",
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                "status": "below_threshold"
            }
        ],
        "cc_result": {
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                "accession": "GCF_000176515.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Enterovibrio",
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            },
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        ]
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    "_bac2feature": {
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    "_genome_taxon": [
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        "hollisae",
        "CIP",
        "101886"
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    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}